Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06787
Gene name
Locationscaffold_08:1064139..1065043
Strand-
Gene length (bp)904
Transcript length (bp)801
Coding sequence length (bp)801
Protein length (aa) 267

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 20 39 19
2 44 66 22
3 81 98 17
4 119 141 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06787
MVDLEWDPDNVPRTKLVLHTLQMLLVFTIWCLEIAVFVGKGAKIVADNAFTFTMCFVSIPAWLYLLMAPRFDRGR
RFAEPRAMLVIDVLFTILWLAAFATQAAYNTANLCGQRCNLSKGIVGLGIFTTLLFAATSLISAYTLKYYNFHGT
LPGYESRKALNANGSSSAIDPDKAAFSTADEDYERVNLDDREAAGANDYSDSGRYAPANPYSADDFADPSRYSPL
PPRNNDLFNTDTEYSSGGAAHKPYADEPARFPAGNYDRAHP*
Coding >Ophcf2|06787
ATGGTCGACTTAGAGTGGGATCCTGACAATGTCCCGCGGACGAAGCTCGTGCTACACACCCTACAGATGCTGCTC
GTCTTCACCATCTGGTGTTTGGAAATCGCCGTCTTCGTGGGCAAGGGCGCCAAGATCGTCGCCGACAATGCCTTT
ACATTCACCATGTGCTTCGTCTCCATTCCTGCGTGGCTCTATCTCTTGATGGCACCTCGGTTCGATCGTGGCCGC
CGCTTCGCCGAACCGCGCGCTATGCTCGTCATCGACGTCCTCTTCACCATCCTTTGGCTGGCGGCCTTTGCCACC
CAGGCCGCTTATAACACGGCCAACCTCTGCGGCCAGCGCTGCAACTTGAGCAAGGGTATCGTCGGGCTGGGCATC
TTCACAACACTACTCTTCGCCGCTACTTCGCTCATCAGCGCCTACACGCTCAAGTACTACAACTTCCACGGCACA
CTTCCAGGCTACGAGTCTCGCAAGGCGCTCAACGCCAACGGCAGCTCCAGCGCCATCGACCCCGACAAGGCCGCC
TTCTCCACGGCCGACGAGGACTACGAGCGGGTCAACCTCGACGACCGCGAGGCCGCCGGCGCCAACGACTACTCC
GACTCGGGCCGTTACGCCCCGGCGAACCCCTACAGCGCCGATGACTTTGCCGATCCCAGCCGTTACAGCCCGCTG
CCGCCTCGCAACAACGACCTCTTTAATACCGATACCGAGTACAGCTCGGGCGGCGCGGCGCACAAGCCGTACGCG
GATGAGCCCGCGCGTTTTCCTGCCGGCAACTACGATCGGGCGCATCCGTAG
Transcript >Ophcf2|06787
ATGGTCGACTTAGAGTGGGATCCTGACAATGTCCCGCGGACGAAGCTCGTGCTACACACCCTACAGATGCTGCTC
GTCTTCACCATCTGGTGTTTGGAAATCGCCGTCTTCGTGGGCAAGGGCGCCAAGATCGTCGCCGACAATGCCTTT
ACATTCACCATGTGCTTCGTCTCCATTCCTGCGTGGCTCTATCTCTTGATGGCACCTCGGTTCGATCGTGGCCGC
CGCTTCGCCGAACCGCGCGCTATGCTCGTCATCGACGTCCTCTTCACCATCCTTTGGCTGGCGGCCTTTGCCACC
CAGGCCGCTTATAACACGGCCAACCTCTGCGGCCAGCGCTGCAACTTGAGCAAGGGTATCGTCGGGCTGGGCATC
TTCACAACACTACTCTTCGCCGCTACTTCGCTCATCAGCGCCTACACGCTCAAGTACTACAACTTCCACGGCACA
CTTCCAGGCTACGAGTCTCGCAAGGCGCTCAACGCCAACGGCAGCTCCAGCGCCATCGACCCCGACAAGGCCGCC
TTCTCCACGGCCGACGAGGACTACGAGCGGGTCAACCTCGACGACCGCGAGGCCGCCGGCGCCAACGACTACTCC
GACTCGGGCCGTTACGCCCCGGCGAACCCCTACAGCGCCGATGACTTTGCCGATCCCAGCCGTTACAGCCCGCTG
CCGCCTCGCAACAACGACCTCTTTAATACCGATACCGAGTACAGCTCGGGCGGCGCGGCGCACAAGCCGTACGCG
GATGAGCCCGCGCGTTTTCCTGCCGGCAACTACGATCGGGCGCATCCGTAG
Gene >Ophcf2|06787
ATGGTCGACTTAGAGTGGGATCCTGACAATGTCCCGCGGACGAAGCTCGTGCTACACACCCTACAGATGCTGCTC
GTCTTCACCATCTGGTGTTTGGAAATCGCCGTCTTCGTGGGCAAGGGCGCCAAGATCGTCGCCGACAATGCCTTT
ACATTCACCATGGTTCGTCTTGTCTGGGCTCCCTCAAGCTCCCCGTGACTGACGCTCCGGCGCAGTGCTTCGTCT
CCATTCCTGCGTGGCTCTATCTCTTGATGGCACCTCGGTTCGATCGTGGCCGCCGCTTCGCCGAACCGCGCGCTA
TGCTCGTCATCGACGTCCTCTTCACCATCCTTTGGCTGGCGGCCTTTGCCACCCAGGCCGCTTATAACACGGCCA
ACCTCTGCGGCCAGCGCTGCAACTTGAGCAAGGGTATCGTCGGGCTGGGCATCTTCACAACGTGCGTACATAATG
CCAATGTCCCTGACGAAATCTAATCTTTCCATTTAGACTACTCTTCGCCGCTACTTCGCTCATCAGCGCCTACAC
GCTCAAGTACTACAACTTCCACGGCACACTTCCAGGCTACGAGTCTCGCAAGGCGCTCAACGCCAACGGCAGCTC
CAGCGCCATCGACCCCGACAAGGCCGCCTTCTCCACGGCCGACGAGGACTACGAGCGGGTCAACCTCGACGACCG
CGAGGCCGCCGGCGCCAACGACTACTCCGACTCGGGCCGTTACGCCCCGGCGAACCCCTACAGCGCCGATGACTT
TGCCGATCCCAGCCGTTACAGCCCGCTGCCGCCTCGCAACAACGACCTCTTTAATACCGATACCGAGTACAGCTC
GGGCGGCGCGGCGCACAAGCCGTACGCGGATGAGCCCGCGCGTTTTCCTGCCGGCAACTACGATCGGGCGCATCC
GTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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