Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06762
Gene name
Locationscaffold_08:997850..999327
Strand+
Gene length (bp)1477
Transcript length (bp)1200
Coding sequence length (bp)1200
Protein length (aa) 400

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 62 0.5

Transmembrane Domains

Domain # Start End Length
1 44 61 17
2 240 257 17
3 262 284 22
4 376 398 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06762
MATSLPSSHHHLEAGLLSTGDDEKNTSLAPPPQPPRSMSTLRRLTLAIILGLLLGLGLSLAKDYTTGPCHSSVDR
AVELQDRFDTADLLRRLLHSWFPAQNLGRSPVAPPVFAGLARRQDDGTGGSNATSRASTSFQPPTSTESSSSSTP
SSTQDSSSSSEPSTVTTSSSVLSSSSQASSETTSASTLAPSSRLTDPVNNLDIPDNIVFDPRGNVLFSSRYVHDE
RSGSIDAIVLQCSSLHAFIIIFIFVSITIYTYNFSLLFPFHTSVVVVVVVFFFFFFSVITTSFQWQTPPMTSSVS
TATKDESDSPTPTQSNRRTMTTGRVSTSSAVRMTWTTTLHNGGITTLTSTSWVDVVPSETAATSSRSKEAGLQNV
APAIKVDAALFAMMAAFAGAVLLV*
Coding >Ophcf2|06762
ATGGCCACCTCCCTTCCCTCGAGCCATCACCACCTAGAGGCTGGCCTGCTGAGCACTGGAGACGACGAAAAGAAC
ACTTCCCTGGCACCACCGCCGCAACCGCCTCGCAGCATGTCAACCCTGCGGAGGCTAACGCTCGCTATCATCCTC
GGCCTCCTCCTTGGATTGGGCCTCTCCCTGGCCAAGGACTACACTACGGGGCCGTGTCACTCTTCCGTTGACCGG
GCTGTCGAGCTTCAGGATCGCTTCGATACGGCCGACCTTCTTCGCCGGCTGCTACATTCTTGGTTCCCTGCCCAG
AATCTCGGGCGTTCTCCCGTTGCGCCTCCGGTCTTCGCCGGCCTGGCTCGGAGGCAGGACGATGGCACGGGGGGC
AGCAACGCTACGTCTCGCGCCTCGACCAGCTTTCAGCCACCCACGTCGACCGAATCGTCTTCCTCGTCAACTCCT
TCGTCTACCCAAGACTCGTCTTCATCATCTGAGCCTTCCACCGTTACCACCTCCTCGTCTGTCCTCTCGTCAAGC
AGTCAAGCTTCATCCGAGACGACGTCGGCTTCGACTTTGGCACCGTCATCGCGGCTGACGGACCCCGTCAACAAC
CTTGATATCCCGGACAACATCGTCTTCGACCCCCGAGGAAACGTCCTCTTCAGCAGCCGGTACGTCCATGATGAA
CGGTCCGGCTCCATCGACGCCATCGTTCTCCAGTGCTCCAGCCTCCATGCCTTTATCATCATCTTTATCTTTGTT
TCCATCACAATCTACACCTACAACTTCAGTCTCCTTTTCCCCTTTCACACCTCCGTCGTCGTCGTCGTCGTCGTC
TTCTTCTTCTTCTTCTTCTCTGTTATCACCACCAGCTTCCAATGGCAAACACCTCCGATGACGTCGAGCGTTAGT
ACGGCAACTAAAGATGAGTCCGATTCACCCACGCCGACGCAGTCGAACCGCAGGACCATGACGACGGGAAGAGTA
TCGACGTCAAGCGCTGTGCGGATGACGTGGACCACGACCCTGCACAACGGGGGCATCACGACTCTCACGTCCACT
TCGTGGGTCGACGTCGTGCCTTCGGAAACGGCGGCCACGTCAAGCCGCTCCAAGGAGGCCGGCTTGCAAAATGTC
GCACCGGCTATCAAGGTCGACGCAGCCCTGTTCGCCATGATGGCTGCTTTCGCCGGCGCCGTTCTGCTGGTCTAG
Transcript >Ophcf2|06762
ATGGCCACCTCCCTTCCCTCGAGCCATCACCACCTAGAGGCTGGCCTGCTGAGCACTGGAGACGACGAAAAGAAC
ACTTCCCTGGCACCACCGCCGCAACCGCCTCGCAGCATGTCAACCCTGCGGAGGCTAACGCTCGCTATCATCCTC
GGCCTCCTCCTTGGATTGGGCCTCTCCCTGGCCAAGGACTACACTACGGGGCCGTGTCACTCTTCCGTTGACCGG
GCTGTCGAGCTTCAGGATCGCTTCGATACGGCCGACCTTCTTCGCCGGCTGCTACATTCTTGGTTCCCTGCCCAG
AATCTCGGGCGTTCTCCCGTTGCGCCTCCGGTCTTCGCCGGCCTGGCTCGGAGGCAGGACGATGGCACGGGGGGC
AGCAACGCTACGTCTCGCGCCTCGACCAGCTTTCAGCCACCCACGTCGACCGAATCGTCTTCCTCGTCAACTCCT
TCGTCTACCCAAGACTCGTCTTCATCATCTGAGCCTTCCACCGTTACCACCTCCTCGTCTGTCCTCTCGTCAAGC
AGTCAAGCTTCATCCGAGACGACGTCGGCTTCGACTTTGGCACCGTCATCGCGGCTGACGGACCCCGTCAACAAC
CTTGATATCCCGGACAACATCGTCTTCGACCCCCGAGGAAACGTCCTCTTCAGCAGCCGGTACGTCCATGATGAA
CGGTCCGGCTCCATCGACGCCATCGTTCTCCAGTGCTCCAGCCTCCATGCCTTTATCATCATCTTTATCTTTGTT
TCCATCACAATCTACACCTACAACTTCAGTCTCCTTTTCCCCTTTCACACCTCCGTCGTCGTCGTCGTCGTCGTC
TTCTTCTTCTTCTTCTTCTCTGTTATCACCACCAGCTTCCAATGGCAAACACCTCCGATGACGTCGAGCGTTAGT
ACGGCAACTAAAGATGAGTCCGATTCACCCACGCCGACGCAGTCGAACCGCAGGACCATGACGACGGGAAGAGTA
TCGACGTCAAGCGCTGTGCGGATGACGTGGACCACGACCCTGCACAACGGGGGCATCACGACTCTCACGTCCACT
TCGTGGGTCGACGTCGTGCCTTCGGAAACGGCGGCCACGTCAAGCCGCTCCAAGGAGGCCGGCTTGCAAAATGTC
GCACCGGCTATCAAGGTCGACGCAGCCCTGTTCGCCATGATGGCTGCTTTCGCCGGCGCCGTTCTGCTGGTCTAG
Gene >Ophcf2|06762
ATGGCCACCTCCCTTCCCTCGAGCCATCACCACCTAGAGGCTGGCCTGCTGAGCACTGGAGACGACGAAAAGAAC
ACTTCCCTGGCACCACCGCCGCAACCGCCTCGCAGCATGTCAACCCTGCGGAGGCTAACGCTCGCTATCATCCTC
GGCCTCCTCCTTGGATTGGGCCTCTCCCTGGCCAAGGACTACACTACGGGGCCGTGTCACTCTTCCGTTGACCGG
GCTGTCGAGCTTCAGGATCGCTTCGATACGGCCGACCTTCTTCGCCGGCTGCTACATTCTTGGTTCCCTGCCCAG
AATCTCGGGCGTTCTCCCGTTGCGCCTCCGGTCTTCGCCGGCCTGGCTCGGAGGCAGGACGATGGCACGGGGGGC
AGCAACGCTACGTCTCGCGCCTCGACCAGCTTTCAGCCACCCACGTCGACCGAATCGTCTTCCTCGTCAACTCCT
TCGTCTACCCAAGACTCGTCTTCATCATCTGAGCCTTCCACCGTTACCACCTCCTCGTCTGGTACGTCACCTCTT
GCTCCGTCGTCGACGGGAACTACATCAACTGACAGCCATACGCAGTCCTCTCGTCAAGCAGTCAAGCTTCATCCG
AGACGACGTCGGCTTCGACTTTGGCACCGTCATCGCGGCTGACGGACCCCGTCAGTACCAGCGTTTCCACGACTG
AGCAGCTCCGACAGACAACCTTGATATCCCGGACAACATCGTCTTCGACCCCCGAGGAAACGTCCTCTTCAGCAG
CCGGTACGTCCATGATGAACGGTCCGGCTCCATCGACGCCATCGTTCTCCAGTGCTCCAGCCTCCATGCCTTTAT
CATCATCTTTATCTTTGTTTCCATCACAATCTACACCTACAACTTCAGTCTCCTTTTCCCCTTTCACACCTCCGT
CGTCGTCGTCGTCGTCGTCTTCTTCTTCTTCTTCTTCTCTGTTATCACGTGCGTCCACGGTACAAGGCTCCGCTT
CGTCCTTGGCCACCATCATCCCCTCGACGACGTCTTCTAGCACCAGCTTCCAATGGCAAACACCTCCGATGACGT
CGAGCGTTAGTACGGCAACTAAAGGTGAATGCGAGCTGCATGGCCGCTTCATACCGTTGCTCGCCGCGAGTGTGG
CTGAACGTCGCATCACACACGACCGTCTCATTTAACCTCGAGCTTGACATGCTGACGAGCTGCAGATGAGTCCGA
TTCACCCACGCCGACGCAGTCGAACCGCAGGACCATGACGACGGGAAGAGTATCGACGTCAAGCGCTGTGCGGAT
GACGTGGACCACGACCCTGCACAACGGGGGCATCACGACTCTCACGTCCACTTCGTGGGTCGACGTCGTGCCTTC
GGAAACGGCGGCCACGTCAAGCCGCTCCAAGGAGGCCGGCTTGCAAAATGTCGCACCGGCTATCAAGGTCGACGC
AGCCCTGTTCGCCATGATGGCTGCTTTCGCCGGCGCCGTTCTGCTGGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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