Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|06748
Gene name
Location	scaffold_08:942427..943671
Strand	-
Gene length (bp)	1244
Transcript length (bp)	1170
Coding sequence length (bp)	1170
Protein length (aa)	390

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08240	ADH_N	Alcohol dehydrogenase GroES-like domain	2.1E-26	68	176
PF00107	ADH_zinc_N	Zinc-binding dehydrogenase	3.1E-23	221	350
PF13602	ADH_zinc_N_2	Zinc-binding dehydrogenase	3.3E-07	253	385

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 38	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	49.60	27.32	71.88
Alive	In ants, during behavior modification	86.49	46.80	126.19
Dead	In ants, recently dead	101.44	57.46	145.42

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.002457	yes
Alive	Dead	0.382739	no
Dead	Fungus	0.000238	yes

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|06748 MGTEQSHTLTNEAEMPTDDDSMPAEQPQTRPSDAEIPSLPSEQWAQVLESKGSPPIYKRIPVPQPSADQVLVHVL FSGVCHSDLHIHRADWSSLNPSLPLTGGHEGAGIVVARGQLVTTIPLGARVGIKWINSSCLSCSFCHRGLEQLCP RAKMSGYSLPGTFQQYALAQASHLARIPDECAHRLAEVAPVLCAGITVYRGLKSSGVIPGQTVAVVGAGGGLGSM AVQYARAMGLDVIAVDSGSEKREACERLGAVSFVDFRDEADVVAAVKAASSDGLGPDAVLLTAVGEEPFRQATLY VRPAGTVVAVGLPPGAQFSAPVLETVLRMVTIRGSYVANRADTAEALDFFRRGLIHAPVTIVGLSDLPRVFRLME EGKIVGRYVLDTSR*
Coding	>Ophcf2\|06748 ATGGGAACGGAGCAGTCCCATACGCTCACCAACGAAGCCGAGATGCCCACTGATGACGACTCGATGCCAGCAGAA CAGCCCCAAACAAGGCCATCCGACGCCGAGATCCCCTCCCTCCCCTCGGAGCAATGGGCCCAAGTCCTCGAATCC AAAGGCTCCCCCCCCATCTACAAACGCATCCCCGTCCCCCAACCGTCGGCAGATCAAGTCCTCGTCCACGTCCTC TTCTCAGGCGTCTGCCATTCAGACCTCCACATCCACCGCGCAGACTGGTCGAGCCTCAACCCGTCCCTCCCCCTG ACAGGCGGCCACGAAGGAGCGGGCATAGTCGTGGCCCGCGGCCAACTCGTCACCACCATCCCCCTCGGCGCCCGC GTCGGCATAAAATGGATCAACAGCTCGTGTCTAAGCTGCTCCTTCTGCCACCGCGGCCTCGAACAGCTCTGTCCC CGGGCCAAAATGTCCGGCTATTCCCTCCCGGGAACCTTTCAGCAGTATGCGCTGGCTCAGGCTTCGCATCTGGCT CGCATCCCGGACGAGTGCGCCCATCGGTTGGCAGAGGTGGCCCCCGTGTTATGCGCCGGAATCACCGTCTACCGC GGCCTCAAGAGCTCCGGCGTCATCCCCGGTCAGACCGTCGCCGTCGTCGGTGCCGGAGGTGGCTTGGGGAGTATG GCGGTGCAGTATGCGCGGGCCATGGGTCTCGACGTCATCGCCGTTGACTCCGGATCCGAGAAGCGAGAGGCGTGC GAGAGGCTCGGAGCCGTGTCCTTCGTTGACTTCCGAGACGAGGCTGACGTCGTGGCTGCTGTCAAGGCCGCCTCG TCGGATGGTCTCGGTCCCGACGCCGTGCTGTTGACGGCCGTCGGTGAGGAGCCCTTCCGTCAGGCGACGCTCTAC GTCCGTCCGGCCGGCACCGTCGTAGCCGTCGGTCTCCCGCCCGGAGCTCAGTTCAGCGCGCCCGTCTTGGAGACC GTTCTTCGCATGGTTACTATCCGTGGCAGCTACGTTGCCAACCGAGCTGATACCGCAGAGGCTCTCGACTTCTTC CGCCGCGGCCTGATTCACGCTCCCGTCACCATCGTTGGCCTTTCCGACCTGCCCCGAGTCTTCCGCTTGATGGAA GAGGGCAAGATTGTCGGTCGATACGTGCTCGACACCAGCAGATAA
Transcript	>Ophcf2\|06748 ATGGGAACGGAGCAGTCCCATACGCTCACCAACGAAGCCGAGATGCCCACTGATGACGACTCGATGCCAGCAGAA CAGCCCCAAACAAGGCCATCCGACGCCGAGATCCCCTCCCTCCCCTCGGAGCAATGGGCCCAAGTCCTCGAATCC AAAGGCTCCCCCCCCATCTACAAACGCATCCCCGTCCCCCAACCGTCGGCAGATCAAGTCCTCGTCCACGTCCTC TTCTCAGGCGTCTGCCATTCAGACCTCCACATCCACCGCGCAGACTGGTCGAGCCTCAACCCGTCCCTCCCCCTG ACAGGCGGCCACGAAGGAGCGGGCATAGTCGTGGCCCGCGGCCAACTCGTCACCACCATCCCCCTCGGCGCCCGC GTCGGCATAAAATGGATCAACAGCTCGTGTCTAAGCTGCTCCTTCTGCCACCGCGGCCTCGAACAGCTCTGTCCC CGGGCCAAAATGTCCGGCTATTCCCTCCCGGGAACCTTTCAGCAGTATGCGCTGGCTCAGGCTTCGCATCTGGCT CGCATCCCGGACGAGTGCGCCCATCGGTTGGCAGAGGTGGCCCCCGTGTTATGCGCCGGAATCACCGTCTACCGC GGCCTCAAGAGCTCCGGCGTCATCCCCGGTCAGACCGTCGCCGTCGTCGGTGCCGGAGGTGGCTTGGGGAGTATG GCGGTGCAGTATGCGCGGGCCATGGGTCTCGACGTCATCGCCGTTGACTCCGGATCCGAGAAGCGAGAGGCGTGC GAGAGGCTCGGAGCCGTGTCCTTCGTTGACTTCCGAGACGAGGCTGACGTCGTGGCTGCTGTCAAGGCCGCCTCG TCGGATGGTCTCGGTCCCGACGCCGTGCTGTTGACGGCCGTCGGTGAGGAGCCCTTCCGTCAGGCGACGCTCTAC GTCCGTCCGGCCGGCACCGTCGTAGCCGTCGGTCTCCCGCCCGGAGCTCAGTTCAGCGCGCCCGTCTTGGAGACC GTTCTTCGCATGGTTACTATCCGTGGCAGCTACGTTGCCAACCGAGCTGATACCGCAGAGGCTCTCGACTTCTTC CGCCGCGGCCTGATTCACGCTCCCGTCACCATCGTTGGCCTTTCCGACCTGCCCCGAGTCTTCCGCTTGATGGAA GAGGGCAAGATTGTCGGTCGATACGTGCTCGACACCAGCAGATAA
Gene	>Ophcf2\|06748 ATGGGAACGGAGCAGTCCCATACGCTCACCAACGAAGCCGAGATGCCCACTGATGACGACTCGATGCCAGCAGAA CAGCCCCAAACAAGGCCATCCGACGCCGAGATCCCCTCCCTCCCCTCGGAGCAATGGGCCCAAGTCCTCGAATCC AAAGGCTCCCGTCCGTCTCTTCCCCCAATCTCCCTCTCCCCACAACCACATGACTAAACAGGCCTTCTCTTCTTT TTCTTCCAGCCCCCATCTACAAACGCATCCCCGTCCCCCAACCGTCGGCAGATCAAGTCCTCGTCCACGTCCTCT TCTCAGGCGTCTGCCATTCAGACCTCCACATCCACCGCGCAGACTGGTCGAGCCTCAACCCGTCCCTCCCCCTGA CAGGCGGCCACGAAGGAGCGGGCATAGTCGTGGCCCGCGGCCAACTCGTCACCACCATCCCCCTCGGCGCCCGCG TCGGCATAAAATGGATCAACAGCTCGTGTCTAAGCTGCTCCTTCTGCCACCGCGGCCTCGAACAGCTCTGTCCCC GGGCCAAAATGTCCGGCTATTCCCTCCCGGGAACCTTTCAGCAGTATGCGCTGGCTCAGGCTTCGCATCTGGCTC GCATCCCGGACGAGTGCGCCCATCGGTTGGCAGAGGTGGCCCCCGTGTTATGCGCCGGAATCACCGTCTACCGCG GCCTCAAGAGCTCCGGCGTCATCCCCGGTCAGACCGTCGCCGTCGTCGGTGCCGGAGGTGGCTTGGGGAGTATGG CGGTGCAGTATGCGCGGGCCATGGGTCTCGACGTCATCGCCGTTGACTCCGGATCCGAGAAGCGAGAGGCGTGCG AGAGGCTCGGAGCCGTGTCCTTCGTTGACTTCCGAGACGAGGCTGACGTCGTGGCTGCTGTCAAGGCCGCCTCGT CGGATGGTCTCGGTCCCGACGCCGTGCTGTTGACGGCCGTCGGTGAGGAGCCCTTCCGTCAGGCGACGCTCTACG TCCGTCCGGCCGGCACCGTCGTAGCCGTCGGTCTCCCGCCCGGAGCTCAGTTCAGCGCGCCCGTCTTGGAGACCG TTCTTCGCATGGTTACTATCCGTGGCAGCTACGTTGCCAACCGAGCTGATACCGCAGAGGCTCTCGACTTCTTCC GCCGCGGCCTGATTCACGCTCCCGTCACCATCGTTGGCCTTTCCGACCTGCCCCGAGTCTTCCGCTTGATGGAAG AGGGCAAGATTGTCGGTCGATACGTGCTCGACACCAGCAGATAA

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