Protein ID | Ophcf2|06748 |
Gene name | |
Location | scaffold_08:942427..943671 |
Strand | - |
Gene length (bp) | 1244 |
Transcript length (bp) | 1170 |
Coding sequence length (bp) | 1170 |
Protein length (aa) | 390 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 2.1E-26 | 68 | 176 |
PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 3.1E-23 | 221 | 350 |
PF13602 | ADH_zinc_N_2 | Zinc-binding dehydrogenase | 3.3E-07 | 253 | 385 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 38 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06748 MGTEQSHTLTNEAEMPTDDDSMPAEQPQTRPSDAEIPSLPSEQWAQVLESKGSPPIYKRIPVPQPSADQVLVHVL FSGVCHSDLHIHRADWSSLNPSLPLTGGHEGAGIVVARGQLVTTIPLGARVGIKWINSSCLSCSFCHRGLEQLCP RAKMSGYSLPGTFQQYALAQASHLARIPDECAHRLAEVAPVLCAGITVYRGLKSSGVIPGQTVAVVGAGGGLGSM AVQYARAMGLDVIAVDSGSEKREACERLGAVSFVDFRDEADVVAAVKAASSDGLGPDAVLLTAVGEEPFRQATLY VRPAGTVVAVGLPPGAQFSAPVLETVLRMVTIRGSYVANRADTAEALDFFRRGLIHAPVTIVGLSDLPRVFRLME EGKIVGRYVLDTSR* |
Coding | >Ophcf2|06748 ATGGGAACGGAGCAGTCCCATACGCTCACCAACGAAGCCGAGATGCCCACTGATGACGACTCGATGCCAGCAGAA CAGCCCCAAACAAGGCCATCCGACGCCGAGATCCCCTCCCTCCCCTCGGAGCAATGGGCCCAAGTCCTCGAATCC AAAGGCTCCCCCCCCATCTACAAACGCATCCCCGTCCCCCAACCGTCGGCAGATCAAGTCCTCGTCCACGTCCTC TTCTCAGGCGTCTGCCATTCAGACCTCCACATCCACCGCGCAGACTGGTCGAGCCTCAACCCGTCCCTCCCCCTG ACAGGCGGCCACGAAGGAGCGGGCATAGTCGTGGCCCGCGGCCAACTCGTCACCACCATCCCCCTCGGCGCCCGC GTCGGCATAAAATGGATCAACAGCTCGTGTCTAAGCTGCTCCTTCTGCCACCGCGGCCTCGAACAGCTCTGTCCC CGGGCCAAAATGTCCGGCTATTCCCTCCCGGGAACCTTTCAGCAGTATGCGCTGGCTCAGGCTTCGCATCTGGCT CGCATCCCGGACGAGTGCGCCCATCGGTTGGCAGAGGTGGCCCCCGTGTTATGCGCCGGAATCACCGTCTACCGC GGCCTCAAGAGCTCCGGCGTCATCCCCGGTCAGACCGTCGCCGTCGTCGGTGCCGGAGGTGGCTTGGGGAGTATG GCGGTGCAGTATGCGCGGGCCATGGGTCTCGACGTCATCGCCGTTGACTCCGGATCCGAGAAGCGAGAGGCGTGC GAGAGGCTCGGAGCCGTGTCCTTCGTTGACTTCCGAGACGAGGCTGACGTCGTGGCTGCTGTCAAGGCCGCCTCG TCGGATGGTCTCGGTCCCGACGCCGTGCTGTTGACGGCCGTCGGTGAGGAGCCCTTCCGTCAGGCGACGCTCTAC GTCCGTCCGGCCGGCACCGTCGTAGCCGTCGGTCTCCCGCCCGGAGCTCAGTTCAGCGCGCCCGTCTTGGAGACC GTTCTTCGCATGGTTACTATCCGTGGCAGCTACGTTGCCAACCGAGCTGATACCGCAGAGGCTCTCGACTTCTTC CGCCGCGGCCTGATTCACGCTCCCGTCACCATCGTTGGCCTTTCCGACCTGCCCCGAGTCTTCCGCTTGATGGAA GAGGGCAAGATTGTCGGTCGATACGTGCTCGACACCAGCAGATAA |
Transcript | >Ophcf2|06748 ATGGGAACGGAGCAGTCCCATACGCTCACCAACGAAGCCGAGATGCCCACTGATGACGACTCGATGCCAGCAGAA CAGCCCCAAACAAGGCCATCCGACGCCGAGATCCCCTCCCTCCCCTCGGAGCAATGGGCCCAAGTCCTCGAATCC AAAGGCTCCCCCCCCATCTACAAACGCATCCCCGTCCCCCAACCGTCGGCAGATCAAGTCCTCGTCCACGTCCTC TTCTCAGGCGTCTGCCATTCAGACCTCCACATCCACCGCGCAGACTGGTCGAGCCTCAACCCGTCCCTCCCCCTG ACAGGCGGCCACGAAGGAGCGGGCATAGTCGTGGCCCGCGGCCAACTCGTCACCACCATCCCCCTCGGCGCCCGC GTCGGCATAAAATGGATCAACAGCTCGTGTCTAAGCTGCTCCTTCTGCCACCGCGGCCTCGAACAGCTCTGTCCC CGGGCCAAAATGTCCGGCTATTCCCTCCCGGGAACCTTTCAGCAGTATGCGCTGGCTCAGGCTTCGCATCTGGCT CGCATCCCGGACGAGTGCGCCCATCGGTTGGCAGAGGTGGCCCCCGTGTTATGCGCCGGAATCACCGTCTACCGC GGCCTCAAGAGCTCCGGCGTCATCCCCGGTCAGACCGTCGCCGTCGTCGGTGCCGGAGGTGGCTTGGGGAGTATG GCGGTGCAGTATGCGCGGGCCATGGGTCTCGACGTCATCGCCGTTGACTCCGGATCCGAGAAGCGAGAGGCGTGC GAGAGGCTCGGAGCCGTGTCCTTCGTTGACTTCCGAGACGAGGCTGACGTCGTGGCTGCTGTCAAGGCCGCCTCG TCGGATGGTCTCGGTCCCGACGCCGTGCTGTTGACGGCCGTCGGTGAGGAGCCCTTCCGTCAGGCGACGCTCTAC GTCCGTCCGGCCGGCACCGTCGTAGCCGTCGGTCTCCCGCCCGGAGCTCAGTTCAGCGCGCCCGTCTTGGAGACC GTTCTTCGCATGGTTACTATCCGTGGCAGCTACGTTGCCAACCGAGCTGATACCGCAGAGGCTCTCGACTTCTTC CGCCGCGGCCTGATTCACGCTCCCGTCACCATCGTTGGCCTTTCCGACCTGCCCCGAGTCTTCCGCTTGATGGAA GAGGGCAAGATTGTCGGTCGATACGTGCTCGACACCAGCAGATAA |
Gene | >Ophcf2|06748 ATGGGAACGGAGCAGTCCCATACGCTCACCAACGAAGCCGAGATGCCCACTGATGACGACTCGATGCCAGCAGAA CAGCCCCAAACAAGGCCATCCGACGCCGAGATCCCCTCCCTCCCCTCGGAGCAATGGGCCCAAGTCCTCGAATCC AAAGGCTCCCGTCCGTCTCTTCCCCCAATCTCCCTCTCCCCACAACCACATGACTAAACAGGCCTTCTCTTCTTT TTCTTCCAGCCCCCATCTACAAACGCATCCCCGTCCCCCAACCGTCGGCAGATCAAGTCCTCGTCCACGTCCTCT TCTCAGGCGTCTGCCATTCAGACCTCCACATCCACCGCGCAGACTGGTCGAGCCTCAACCCGTCCCTCCCCCTGA CAGGCGGCCACGAAGGAGCGGGCATAGTCGTGGCCCGCGGCCAACTCGTCACCACCATCCCCCTCGGCGCCCGCG TCGGCATAAAATGGATCAACAGCTCGTGTCTAAGCTGCTCCTTCTGCCACCGCGGCCTCGAACAGCTCTGTCCCC GGGCCAAAATGTCCGGCTATTCCCTCCCGGGAACCTTTCAGCAGTATGCGCTGGCTCAGGCTTCGCATCTGGCTC GCATCCCGGACGAGTGCGCCCATCGGTTGGCAGAGGTGGCCCCCGTGTTATGCGCCGGAATCACCGTCTACCGCG GCCTCAAGAGCTCCGGCGTCATCCCCGGTCAGACCGTCGCCGTCGTCGGTGCCGGAGGTGGCTTGGGGAGTATGG CGGTGCAGTATGCGCGGGCCATGGGTCTCGACGTCATCGCCGTTGACTCCGGATCCGAGAAGCGAGAGGCGTGCG AGAGGCTCGGAGCCGTGTCCTTCGTTGACTTCCGAGACGAGGCTGACGTCGTGGCTGCTGTCAAGGCCGCCTCGT CGGATGGTCTCGGTCCCGACGCCGTGCTGTTGACGGCCGTCGGTGAGGAGCCCTTCCGTCAGGCGACGCTCTACG TCCGTCCGGCCGGCACCGTCGTAGCCGTCGGTCTCCCGCCCGGAGCTCAGTTCAGCGCGCCCGTCTTGGAGACCG TTCTTCGCATGGTTACTATCCGTGGCAGCTACGTTGCCAACCGAGCTGATACCGCAGAGGCTCTCGACTTCTTCC GCCGCGGCCTGATTCACGCTCCCGTCACCATCGTTGGCCTTTCCGACCTGCCCCGAGTCTTCCGCTTGATGGAAG AGGGCAAGATTGTCGGTCGATACGTGCTCGACACCAGCAGATAA |