Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06736
Gene name
Locationscaffold_08:918680..920824
Strand-
Gene length (bp)2144
Transcript length (bp)2022
Coding sequence length (bp)2022
Protein length (aa) 674

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09531 Ndc1_Nup Nucleoporin protein Ndc1-Nup 1.5E-175 17 613

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.5

Transmembrane Domains

Domain # Start End Length
1 26 48 22
2 52 74 22
3 81 103 22
4 107 126 19
5 147 164 17
6 212 234 22
7 268 290 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06736
MAVTPSRRAPYKDVLQPALHRRFSSTATLLLAASYLEALLLAPWTSFFWSWFPFGPCGIRTGLIFACGLAILVLR
IANYQVGFRTTASGLHSLVLILSSAGSWETAFWYGFSALLFCPVYLASVPGSSNLQWITYLSGDRARLNERPLFL
ACYLIMCSLWQTLRHYRLDLDHVDLEMPKREIESRESDSGAQSGVLDAISSQIPKVLSECGFQAFWSLGSTFALY
FTCLRWFVWGWSMTVLRLFYSLPQSKIPPQSWPVDLFLMARCICAGTLLFAVWSTGNTAFSLFMAKEPLKSGKPL
TSESKDPNGSLLNGLKSKKPSIQAFAMWELALISQNFDTRRQAIYRDIDRKDGPLWAQICAICMELIQSIERRVD
QYGKPDTLVVARPAEEVIRQRVSAPLLDEPILSKTNRSYGVMGGVEKAWDQVGRTPGSSAVSELSPLAKKTWKGA
KDRLLSKEQQEALSPDHIRNGLESWAAGLADVWWLGGLLRQDSGKRLAAVVLGSPRAEPAMYIHAIEALCQLALH
SLAEDEFGIVQRDVASVIRTMTAVTGKVESLKRQFPSHWTDPAGKAVTSPAVDAVTEALRTGLERLVTTFEPYGR
DLGLSRGDVRLAREAATRTAEAKSVARAVEKKKTATGPKPRRGQERERERERERERQRERPRATRGVEMEQVR*
Coding >Ophcf2|06736
ATGGCCGTGACACCGAGTCGAAGGGCTCCTTACAAGGACGTGCTACAGCCCGCCTTGCATAGGCGCTTCTCCTCG
ACGGCCACTCTCTTGCTAGCCGCGTCGTATCTCGAGGCTCTTCTCCTGGCGCCGTGGACATCCTTCTTTTGGTCG
TGGTTCCCCTTTGGACCATGCGGCATCCGCACCGGCCTCATCTTCGCCTGCGGTCTCGCCATCCTCGTCCTCCGC
ATCGCAAACTACCAAGTCGGCTTCCGGACGACGGCTTCGGGACTGCACTCTCTCGTCTTGATTCTCTCCAGCGCG
GGATCTTGGGAGACGGCCTTTTGGTACGGCTTCTCGGCCTTGCTCTTTTGCCCCGTCTACCTGGCCTCCGTGCCT
GGCTCGTCAAACCTCCAATGGATCACGTACCTGAGCGGTGATCGCGCCAGACTCAACGAGCGGCCTTTGTTTTTG
GCCTGCTACCTGATAATGTGCTCGCTGTGGCAGACTCTGCGCCATTATAGGCTCGACCTGGATCACGTCGACCTC
GAGATGCCGAAGCGAGAAATCGAGAGTCGAGAGTCGGACTCAGGAGCGCAGTCGGGGGTCCTCGACGCAATATCT
TCTCAGATTCCCAAGGTTCTGTCGGAATGTGGATTTCAGGCCTTTTGGTCTCTGGGCTCGACTTTCGCCCTTTAC
TTCACTTGCTTGAGGTGGTTTGTATGGGGCTGGTCCATGACCGTATTACGACTATTTTACAGCCTTCCGCAGTCC
AAGATACCGCCGCAATCATGGCCGGTGGATCTCTTTCTCATGGCACGCTGCATATGCGCTGGCACACTCTTGTTC
GCCGTCTGGTCGACGGGGAATACGGCCTTTTCCCTCTTCATGGCCAAAGAGCCTCTGAAGAGCGGGAAGCCTCTG
ACGTCGGAGTCGAAGGATCCTAACGGGAGTCTTTTGAACGGGCTCAAGAGCAAGAAGCCATCCATACAGGCCTTT
GCCATGTGGGAGCTGGCGCTCATCTCTCAGAATTTTGACACGCGCAGACAAGCCATATACCGAGACATCGACCGC
AAGGACGGCCCCTTGTGGGCGCAGATTTGCGCCATCTGCATGGAACTCATACAGAGTATAGAGCGGCGGGTGGAC
CAGTACGGGAAGCCGGACACGTTGGTCGTCGCTCGGCCCGCAGAAGAGGTCATCAGACAACGGGTATCGGCGCCA
CTGCTAGACGAGCCCATCTTGAGCAAGACAAACCGGAGCTACGGCGTGATGGGTGGCGTGGAAAAGGCATGGGAT
CAAGTCGGTCGAACGCCCGGCTCGTCGGCCGTGTCTGAGCTGAGCCCACTGGCGAAAAAGACGTGGAAGGGAGCC
AAGGACCGGCTCCTGAGCAAGGAGCAGCAGGAGGCGCTCTCGCCGGACCACATCAGGAACGGGCTCGAGAGTTGG
GCAGCCGGATTGGCCGACGTCTGGTGGCTCGGGGGTCTGCTGCGGCAGGACTCGGGCAAGCGTCTGGCTGCGGTG
GTTTTAGGGTCGCCACGCGCGGAGCCTGCGATGTACATTCACGCCATCGAGGCACTCTGTCAACTCGCATTGCAC
AGCCTCGCGGAAGACGAGTTCGGCATCGTGCAGCGAGACGTGGCGAGCGTGATACGGACCATGACGGCAGTGACG
GGAAAGGTGGAATCGCTCAAGCGGCAGTTCCCGAGCCACTGGACGGACCCTGCCGGAAAGGCGGTCACGAGTCCC
GCAGTGGACGCCGTGACGGAGGCGCTGCGCACGGGGCTGGAGCGGTTGGTGACGACGTTTGAGCCCTACGGGCGC
GATCTGGGGCTGTCGCGGGGAGACGTCAGGCTGGCCAGGGAGGCGGCGACTCGGACGGCGGAGGCCAAGAGCGTG
GCACGGGCCGTGGAGAAGAAGAAGACGGCGACGGGGCCGAAGCCGAGGAGAGGGCAGGAAAGGGAGAGAGAGAGG
GAGCGCGAGAGGGAGAGGCAAAGGGAGAGACCGAGGGCGACACGTGGCGTGGAGATGGAACAAGTGCGATGA
Transcript >Ophcf2|06736
ATGGCCGTGACACCGAGTCGAAGGGCTCCTTACAAGGACGTGCTACAGCCCGCCTTGCATAGGCGCTTCTCCTCG
ACGGCCACTCTCTTGCTAGCCGCGTCGTATCTCGAGGCTCTTCTCCTGGCGCCGTGGACATCCTTCTTTTGGTCG
TGGTTCCCCTTTGGACCATGCGGCATCCGCACCGGCCTCATCTTCGCCTGCGGTCTCGCCATCCTCGTCCTCCGC
ATCGCAAACTACCAAGTCGGCTTCCGGACGACGGCTTCGGGACTGCACTCTCTCGTCTTGATTCTCTCCAGCGCG
GGATCTTGGGAGACGGCCTTTTGGTACGGCTTCTCGGCCTTGCTCTTTTGCCCCGTCTACCTGGCCTCCGTGCCT
GGCTCGTCAAACCTCCAATGGATCACGTACCTGAGCGGTGATCGCGCCAGACTCAACGAGCGGCCTTTGTTTTTG
GCCTGCTACCTGATAATGTGCTCGCTGTGGCAGACTCTGCGCCATTATAGGCTCGACCTGGATCACGTCGACCTC
GAGATGCCGAAGCGAGAAATCGAGAGTCGAGAGTCGGACTCAGGAGCGCAGTCGGGGGTCCTCGACGCAATATCT
TCTCAGATTCCCAAGGTTCTGTCGGAATGTGGATTTCAGGCCTTTTGGTCTCTGGGCTCGACTTTCGCCCTTTAC
TTCACTTGCTTGAGGTGGTTTGTATGGGGCTGGTCCATGACCGTATTACGACTATTTTACAGCCTTCCGCAGTCC
AAGATACCGCCGCAATCATGGCCGGTGGATCTCTTTCTCATGGCACGCTGCATATGCGCTGGCACACTCTTGTTC
GCCGTCTGGTCGACGGGGAATACGGCCTTTTCCCTCTTCATGGCCAAAGAGCCTCTGAAGAGCGGGAAGCCTCTG
ACGTCGGAGTCGAAGGATCCTAACGGGAGTCTTTTGAACGGGCTCAAGAGCAAGAAGCCATCCATACAGGCCTTT
GCCATGTGGGAGCTGGCGCTCATCTCTCAGAATTTTGACACGCGCAGACAAGCCATATACCGAGACATCGACCGC
AAGGACGGCCCCTTGTGGGCGCAGATTTGCGCCATCTGCATGGAACTCATACAGAGTATAGAGCGGCGGGTGGAC
CAGTACGGGAAGCCGGACACGTTGGTCGTCGCTCGGCCCGCAGAAGAGGTCATCAGACAACGGGTATCGGCGCCA
CTGCTAGACGAGCCCATCTTGAGCAAGACAAACCGGAGCTACGGCGTGATGGGTGGCGTGGAAAAGGCATGGGAT
CAAGTCGGTCGAACGCCCGGCTCGTCGGCCGTGTCTGAGCTGAGCCCACTGGCGAAAAAGACGTGGAAGGGAGCC
AAGGACCGGCTCCTGAGCAAGGAGCAGCAGGAGGCGCTCTCGCCGGACCACATCAGGAACGGGCTCGAGAGTTGG
GCAGCCGGATTGGCCGACGTCTGGTGGCTCGGGGGTCTGCTGCGGCAGGACTCGGGCAAGCGTCTGGCTGCGGTG
GTTTTAGGGTCGCCACGCGCGGAGCCTGCGATGTACATTCACGCCATCGAGGCACTCTGTCAACTCGCATTGCAC
AGCCTCGCGGAAGACGAGTTCGGCATCGTGCAGCGAGACGTGGCGAGCGTGATACGGACCATGACGGCAGTGACG
GGAAAGGTGGAATCGCTCAAGCGGCAGTTCCCGAGCCACTGGACGGACCCTGCCGGAAAGGCGGTCACGAGTCCC
GCAGTGGACGCCGTGACGGAGGCGCTGCGCACGGGGCTGGAGCGGTTGGTGACGACGTTTGAGCCCTACGGGCGC
GATCTGGGGCTGTCGCGGGGAGACGTCAGGCTGGCCAGGGAGGCGGCGACTCGGACGGCGGAGGCCAAGAGCGTG
GCACGGGCCGTGGAGAAGAAGAAGACGGCGACGGGGCCGAAGCCGAGGAGAGGGCAGGAAAGGGAGAGAGAGAGG
GAGCGCGAGAGGGAGAGGCAAAGGGAGAGACCGAGGGCGACACGTGGCGTGGAGATGGAACAAGTGCGATGA
Gene >Ophcf2|06736
ATGGCCGTGACACCGAGTCGAAGGGCTCCTTACAAGGACGTGCTACAGCCCGCCTTGCATAGGCGCTTCTCCTCG
ACGGCCACTCTCTTGCTAGCCGCGTCGTATCTCGAGGCTCTTCTCCTGGCGCCGTGGACATCCTGTGAGCGGATC
ATGATGCAGCCTCTCGAGGCGATGGTAACAGACAGAGCTGACGAGACGCAGTCTTTTGGTCGTGGTTCCCCTTTG
GACCATGCGGCATCCGCACCGGCCTCATCTTCGCCTGCGGTCTCGCCATCCTCGTCCTCCGCATCGCAAACTACC
AAGTCGGCTTCCGGACGACGGCTTCGGGACTGCACTCTCTCGTCTTGATTCTCTCCAGCGCGGGATCTTGGGAGA
CGGCCTTTTGGTACGGCTTCTCGGCCTTGCTCTTTTGCCCCGTCTACCTGGCCTCCGTGCCTGGCTCGTCAAACC
TCCAATGGATCACGTACCTGAGCGGTGATCGCGCCAGACTCAACGAGCGGCCTTTGTTTTTGGCCTGCTACCTGA
TAATGTGCTCGCTGTGGCAGACTCTGCGCCATTATAGGCTCGACCTGGATCACGTCGACCTCGAGATGCCGAAGC
GAGAAATCGAGAGTCGAGAGTCGGACTCAGGAGCGCAGTCGGGGGTCCTCGACGCAATATCTTCTCAGATTCCCA
AGGTTCTGTCGGAATGTGGATTTCAGGCCTTTTGGTCTCTGGGCTCGACTTTCGCCCTTTACTTCACTTGCTTGA
GGTGGTTTGTATGGGGCTGGTCCATGACCGTATTACGACTATTTTACAGCCTTCCGCAGTCCAAGATACCGCCGC
AATCATGGCCGGTGGATCTCTTTCTCATGGCACGCTGCATATGCGCTGGCACACTCTTGTTCGCCGTCTGGTCGA
CGGGGAATACGGCCTTTTCCCTCTTCATGGCCAAAGAGCCTCTGAAGAGCGGGAAGCCTCTGACGTCGGAGTCGA
AGGATCCTAACGGGAGTCTTTTGAACGGGCTCAAGAGCAAGAAGCCATCCATACAGGTGTGTCTCGTCAGCCATC
TACTGGTTCCGTGATAGCATCTTGGCTAACATGAACATGAGGCCTTTGCCATGTGGGAGCTGGCGCTCATCTCTC
AGAATTTTGACACGCGCAGACAAGCCATATACCGAGACATCGACCGCAAGGACGGCCCCTTGTGGGCGCAGATTT
GCGCCATCTGCATGGAACTCATACAGAGTATAGAGCGGCGGGTGGACCAGTACGGGAAGCCGGACACGTTGGTCG
TCGCTCGGCCCGCAGAAGAGGTCATCAGACAACGGGTATCGGCGCCACTGCTAGACGAGCCCATCTTGAGCAAGA
CAAACCGGAGCTACGGCGTGATGGGTGGCGTGGAAAAGGCATGGGATCAAGTCGGTCGAACGCCCGGCTCGTCGG
CCGTGTCTGAGCTGAGCCCACTGGCGAAAAAGACGTGGAAGGGAGCCAAGGACCGGCTCCTGAGCAAGGAGCAGC
AGGAGGCGCTCTCGCCGGACCACATCAGGAACGGGCTCGAGAGTTGGGCAGCCGGATTGGCCGACGTCTGGTGGC
TCGGGGGTCTGCTGCGGCAGGACTCGGGCAAGCGTCTGGCTGCGGTGGTTTTAGGGTCGCCACGCGCGGAGCCTG
CGATGTACATTCACGCCATCGAGGCACTCTGTCAACTCGCATTGCACAGCCTCGCGGAAGACGAGTTCGGCATCG
TGCAGCGAGACGTGGCGAGCGTGATACGGACCATGACGGCAGTGACGGGAAAGGTGGAATCGCTCAAGCGGCAGT
TCCCGAGCCACTGGACGGACCCTGCCGGAAAGGCGGTCACGAGTCCCGCAGTGGACGCCGTGACGGAGGCGCTGC
GCACGGGGCTGGAGCGGTTGGTGACGACGTTTGAGCCCTACGGGCGCGATCTGGGGCTGTCGCGGGGAGACGTCA
GGCTGGCCAGGGAGGCGGCGACTCGGACGGCGGAGGCCAAGAGCGTGGCACGGGCCGTGGAGAAGAAGAAGACGG
CGACGGGGCCGAAGCCGAGGAGAGGGCAGGAAAGGGAGAGAGAGAGGGAGCGCGAGAGGGAGAGGCAAAGGGAGA
GACCGAGGGCGACACGTGGCGTGGAGATGGAACAAGTGCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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