Protein ID | Ophcf2|06681 |
Gene name | |
Location | scaffold_08:790589..791047 |
Strand | - |
Gene length (bp) | 458 |
Transcript length (bp) | 285 |
Coding sequence length (bp) | 285 |
Protein length (aa) | 95 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06522 | B12D | NADH-ubiquinone reductase complex 1 MLRQ subunit | 1.3E-05 | 50 | 88 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 52 | 71 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06681 MRSTVALRMFRPTQRMMFRSSPRVMRPLPNEELAGHTISQRLRKLKEIPAELIPLAVVVGFALFAAGYSIVRKIM TDKNLRLTRSRQPPGRNDH* |
Coding | >Ophcf2|06681 ATGCGCTCGACAGTCGCCCTCAGGATGTTCCGACCGACGCAGCGGATGATGTTTCGTTCGTCGCCTCGAGTCATG CGCCCTCTTCCGAATGAAGAACTGGCAGGCCATACCATCTCCCAGCGGCTACGCAAGCTCAAGGAGATCCCGGCC GAACTGATACCGCTCGCCGTCGTCGTGGGATTCGCCCTTTTTGCTGCTGGCTACTCGATCGTGAGGAAGATTATG ACGGACAAGAACCTTCGACTCACCAGGTCCCGACAGCCTCCTGGCCGAAATGACCACTGA |
Transcript | >Ophcf2|06681 ATGCGCTCGACAGTCGCCCTCAGGATGTTCCGACCGACGCAGCGGATGATGTTTCGTTCGTCGCCTCGAGTCATG CGCCCTCTTCCGAATGAAGAACTGGCAGGCCATACCATCTCCCAGCGGCTACGCAAGCTCAAGGAGATCCCGGCC GAACTGATACCGCTCGCCGTCGTCGTGGGATTCGCCCTTTTTGCTGCTGGCTACTCGATCGTGAGGAAGATTATG ACGGACAAGAACCTTCGACTCACCAGGTCCCGACAGCCTCCTGGCCGAAATGACCACTGA |
Gene | >Ophcf2|06681 ATGCGCTCGACAGTCGCCCTCAGGATGTTCCGACCGACGCAGCGGATGATGTTTCGTTCGTCGCCTCGAGTCATG CGCCCTCTTCCGGTGAGTGCATGCCCAGGGATGTGCTTGGAGACTCGGATCTGACGCGCCGGACTAGAATGAAGA ACTGGCAGGTGGGTAGCTGGAAGCTCTCCGACATTTGATGAATCTTGGGACGCAATCTGATCTCAGTCAAGGCCA TACCATCTCCCAGCGGCTACGCAAGCTCAAGGAGATCCCGGCCGAACTGATACCGCTCGGTAACCCTACCCGACC GGCTTCAAATGGCAGCTGCCAAGCGCTAACACGAACCAGCCGTCGTCGTGGGATTCGCCCTTTTTGCTGCTGGCT ACTCGATCGTGAGGAAGATTATGACGGACAAGAACCTTCGACTCACCAGGTCCCGACAGCCTCCTGGCCGAAATG ACCACTGA |