Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06657
Gene name
Locationscaffold_08:727582..728781
Strand+
Gene length (bp)1199
Transcript length (bp)1101
Coding sequence length (bp)1101
Protein length (aa) 367

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08551 DUF1751 Eukaryotic integral membrane protein (DUF1751) 1.5E-27 48 146

GO

GO Term Description Terminal node
GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum Yes
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0048193 Golgi vesicle transport No
GO:0016192 vesicle-mediated transport No
GO:0008150 biological_process No
GO:0031224 intrinsic component of membrane No
GO:0006810 transport No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 10 27 17
2 39 58 19
3 68 85 17
4 97 119 22
5 134 156 22
6 168 190 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06657
MPPRINIPPVTRTLLVALVFQSILSASIRYRQWTGHADIIIPYLTFVPQLSLAYPWTLVSTTLVEGNVFTLAIAA
LTLYHGGRYLERAWSSAELAKFLVICSIVPNLLTFGIMLLFFTLTRNESWTLSVISGTVSLQVGFLVAFSQLIPA
HTVTLFRGILSLRVPRFPLLYIGVVAVLSLTPLLSRAAFWLAVFGFLTSWTYLRFYKVVFPDLDSSQPASLRGDA
SETFALAEFFPGPVKPAVAALSDHVFDILVAMRLCTPFSQADVFAARGDRFLQRSAPGSARAEAERRRAIALQAL
DQRLNAATANSVARSSPSQPIPVQPTAPTVQTQPQPSTQNAMISPPEPMLGATKFEPDDDDEARKS*
Coding >Ophcf2|06657
ATGCCTCCGCGCATCAACATCCCGCCCGTGACCCGCACCCTCCTCGTCGCCCTCGTCTTCCAGTCTATCCTCAGC
GCCTCCATCCGCTACCGTCAATGGACTGGCCACGCCGACATCATCATCCCCTACCTGACCTTTGTCCCTCAGCTC
TCCCTCGCCTACCCCTGGACGCTCGTTTCGACGACGCTGGTTGAGGGTAACGTCTTTACGCTCGCCATTGCCGCC
TTGACCCTCTATCATGGCGGCAGGTATCTGGAGCGCGCCTGGTCCTCGGCCGAGCTTGCCAAGTTTCTCGTCATC
TGCTCCATCGTGCCCAACCTGCTTACCTTTGGCATCATGCTCCTCTTCTTCACCCTGACGCGCAACGAGAGCTGG
ACCCTCTCCGTCATCTCGGGCACCGTCTCCCTCCAGGTGGGGTTCCTCGTCGCCTTCAGCCAGCTCATCCCGGCG
CACACCGTCACTCTTTTCCGCGGCATCCTCTCGCTGAGGGTTCCCCGATTCCCGCTGCTGTACATTGGCGTCGTG
GCCGTCTTGTCGTTGACGCCCCTGTTGTCGAGGGCCGCCTTCTGGCTCGCCGTCTTTGGCTTCCTGACGAGCTGG
ACCTACCTGCGCTTCTACAAGGTTGTCTTCCCCGACCTCGACTCGTCTCAACCGGCATCTCTGCGGGGCGACGCA
AGCGAAACGTTCGCCCTGGCCGAGTTCTTCCCCGGACCCGTCAAGCCGGCCGTGGCCGCCCTTTCGGACCACGTC
TTCGATATCCTCGTCGCCATGCGCCTCTGCACGCCCTTTTCCCAAGCCGACGTCTTCGCCGCCCGCGGAGACAGG
TTCCTACAGAGGAGCGCGCCTGGAAGCGCCCGTGCCGAGGCCGAACGGAGGCGAGCCATCGCCCTTCAGGCGCTC
GACCAGAGACTCAACGCCGCCACGGCCAACAGCGTCGCCAGGTCGTCGCCATCTCAGCCGATTCCCGTCCAACCG
ACGGCACCGACTGTCCAAACACAGCCGCAGCCGAGCACCCAGAATGCCATGATATCTCCGCCCGAACCGATGCTC
GGCGCGACCAAGTTTGAGCCCGACGACGACGACGAGGCGAGGAAGAGTTGA
Transcript >Ophcf2|06657
ATGCCTCCGCGCATCAACATCCCGCCCGTGACCCGCACCCTCCTCGTCGCCCTCGTCTTCCAGTCTATCCTCAGC
GCCTCCATCCGCTACCGTCAATGGACTGGCCACGCCGACATCATCATCCCCTACCTGACCTTTGTCCCTCAGCTC
TCCCTCGCCTACCCCTGGACGCTCGTTTCGACGACGCTGGTTGAGGGTAACGTCTTTACGCTCGCCATTGCCGCC
TTGACCCTCTATCATGGCGGCAGGTATCTGGAGCGCGCCTGGTCCTCGGCCGAGCTTGCCAAGTTTCTCGTCATC
TGCTCCATCGTGCCCAACCTGCTTACCTTTGGCATCATGCTCCTCTTCTTCACCCTGACGCGCAACGAGAGCTGG
ACCCTCTCCGTCATCTCGGGCACCGTCTCCCTCCAGGTGGGGTTCCTCGTCGCCTTCAGCCAGCTCATCCCGGCG
CACACCGTCACTCTTTTCCGCGGCATCCTCTCGCTGAGGGTTCCCCGATTCCCGCTGCTGTACATTGGCGTCGTG
GCCGTCTTGTCGTTGACGCCCCTGTTGTCGAGGGCCGCCTTCTGGCTCGCCGTCTTTGGCTTCCTGACGAGCTGG
ACCTACCTGCGCTTCTACAAGGTTGTCTTCCCCGACCTCGACTCGTCTCAACCGGCATCTCTGCGGGGCGACGCA
AGCGAAACGTTCGCCCTGGCCGAGTTCTTCCCCGGACCCGTCAAGCCGGCCGTGGCCGCCCTTTCGGACCACGTC
TTCGATATCCTCGTCGCCATGCGCCTCTGCACGCCCTTTTCCCAAGCCGACGTCTTCGCCGCCCGCGGAGACAGG
TTCCTACAGAGGAGCGCGCCTGGAAGCGCCCGTGCCGAGGCCGAACGGAGGCGAGCCATCGCCCTTCAGGCGCTC
GACCAGAGACTCAACGCCGCCACGGCCAACAGCGTCGCCAGGTCGTCGCCATCTCAGCCGATTCCCGTCCAACCG
ACGGCACCGACTGTCCAAACACAGCCGCAGCCGAGCACCCAGAATGCCATGATATCTCCGCCCGAACCGATGCTC
GGCGCGACCAAGTTTGAGCCCGACGACGACGACGAGGCGAGGAAGAGTTGA
Gene >Ophcf2|06657
ATGCCTCCGCGCATCAACATCCCGCCCGTGACCCGCACCCTCCTCGTCGCCCTCGTCTTCCAGTCTATCCTCAGC
GCCTCCATCCGCTACCGTCAATGGACTGGCCACGCCGACATCATCATCCCCTACCTGACCTTTGTCCCTCAGCTC
TCCCTCGCCTACCCCTGGACGCTCGTTTCGACGACGCTGGTTGAGGGTAACGTCTTTACGCTCGCCATTGCCGCC
TTGACCCTCTATCATGGCGGCAGGTATCTGGAGCGCGCCTGGTCCTCGGCCGAGCTTGCCAAGTTTCTCGTCATC
TGCTCCATCGTGCCCAACCTGCTTACCTTTGGCATCATGCTCCTCTTCTTCACCCTGACGCGCAACGAGAGCTGG
ACGTACGTCGTCAAAGCGCTCCATTTCTTTTTCCTACTTCCCTGAGCCCCTCTACCTGTTCTCTCTGCCGTGCTA
ACAGGCTTGCGCGCGTCTCTCCCAGCCTCTCCGTCATCTCGGGCACCGTCTCCCTCCAGGTGGGGTTCCTCGTCG
CCTTCAGCCAGCTCATCCCGGCGCACACCGTCACTCTTTTCCGCGGCATCCTCTCGCTGAGGGTTCCCCGATTCC
CGCTGCTGTACATTGGCGTCGTGGCCGTCTTGTCGTTGACGCCCCTGTTGTCGAGGGCCGCCTTCTGGCTCGCCG
TCTTTGGCTTCCTGACGAGCTGGACCTACCTGCGCTTCTACAAGGTTGTCTTCCCCGACCTCGACTCGTCTCAAC
CGGCATCTCTGCGGGGCGACGCAAGCGAAACGTTCGCCCTGGCCGAGTTCTTCCCCGGACCCGTCAAGCCGGCCG
TGGCCGCCCTTTCGGACCACGTCTTCGATATCCTCGTCGCCATGCGCCTCTGCACGCCCTTTTCCCAAGCCGACG
TCTTCGCCGCCCGCGGAGACAGGTTCCTACAGAGGAGCGCGCCTGGAAGCGCCCGTGCCGAGGCCGAACGGAGGC
GAGCCATCGCCCTTCAGGCGCTCGACCAGAGACTCAACGCCGCCACGGCCAACAGCGTCGCCAGGTCGTCGCCAT
CTCAGCCGATTCCCGTCCAACCGACGGCACCGACTGTCCAAACACAGCCGCAGCCGAGCACCCAGAATGCCATGA
TATCTCCGCCCGAACCGATGCTCGGCGCGACCAAGTTTGAGCCCGACGACGACGACGAGGCGAGGAAGAGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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