Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06646
Gene name
Locationscaffold_08:692814..693879
Strand-
Gene length (bp)1065
Transcript length (bp)951
Coding sequence length (bp)951
Protein length (aa) 317

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 7.9E-16 8 92
PF00153 Mito_carr Mitochondrial carrier protein 8.8E-16 105 209
PF00153 Mito_carr Mitochondrial carrier protein 1.4E-15 216 299

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 62 84 22
3 112 134 22
4 178 200 22
5 215 237 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06646
MTASQNDNVAHALAGAGGGILSMMLTYPLITLSTRAQVESTKAETGFVAAVRRIVAREGIAGLYSGVNSALFGIS
VTNFVYYFWYEWTRGSFERAARSAGRAGKKLSTIESMIAGAIAGSATVIITNPIWVVNTRVTTRQQSVQGQDVEA
AATGRRRRVTPSTIGTLMSLLRNEGPQALFAGVIPALVLVINPILQYTFFEQMKNAVEKRQRAVTPTIAFVLGAL
GKLLATSVTYPYITVKSQMHVAGHSNSKKEGMSQALRRVIGDEGYAGLYKGIGPKVTQSVLTAALLFAFKDFLYE
QTVRLRTSAARKRLAV*
Coding >Ophcf2|06646
ATGACCGCTTCACAGAACGACAACGTCGCCCACGCCCTCGCCGGCGCCGGCGGAGGCATCCTCTCCATGATGTTA
ACATATCCGCTCATCACGCTCTCGACACGCGCACAGGTCGAGTCCACCAAAGCGGAGACGGGCTTCGTCGCCGCC
GTCCGTCGCATCGTCGCCCGCGAGGGCATCGCCGGACTGTATTCGGGCGTCAACTCGGCACTCTTCGGAATCAGC
GTCACAAATTTCGTCTACTATTTCTGGTACGAGTGGACGAGGGGCTCCTTTGAGCGCGCCGCTCGCTCGGCCGGG
CGGGCGGGAAAGAAGCTCTCAACCATCGAGTCGATGATAGCCGGTGCCATCGCCGGGTCGGCCACCGTCATAATC
ACCAATCCAATCTGGGTCGTCAACACCAGAGTAACCACTCGTCAGCAGAGCGTGCAAGGACAAGACGTCGAGGCC
GCTGCCACAGGTCGACGTCGGCGTGTCACCCCCTCAACCATCGGCACCCTCATGTCGCTGCTCCGCAACGAAGGT
CCGCAGGCGCTCTTCGCCGGCGTCATCCCCGCTCTCGTCCTCGTCATAAACCCGATTCTGCAATATACCTTTTTC
GAGCAGATGAAGAACGCCGTCGAGAAGCGGCAGAGGGCCGTCACTCCCACCATTGCCTTCGTTCTCGGTGCGCTG
GGCAAGCTGCTCGCCACGTCTGTCACGTACCCGTACATTACCGTCAAGAGTCAGATGCATGTCGCGGGACACAGT
AACAGCAAGAAAGAGGGCATGTCTCAGGCTCTGCGCCGCGTCATCGGGGACGAGGGCTACGCCGGCCTCTACAAG
GGTATCGGTCCCAAGGTCACCCAGAGCGTTCTGACGGCTGCCTTGCTCTTCGCCTTCAAGGACTTTCTGTACGAG
CAGACGGTCAGGCTTCGCACGTCGGCTGCTCGAAAGCGTCTCGCCGTCTAG
Transcript >Ophcf2|06646
ATGACCGCTTCACAGAACGACAACGTCGCCCACGCCCTCGCCGGCGCCGGCGGAGGCATCCTCTCCATGATGTTA
ACATATCCGCTCATCACGCTCTCGACACGCGCACAGGTCGAGTCCACCAAAGCGGAGACGGGCTTCGTCGCCGCC
GTCCGTCGCATCGTCGCCCGCGAGGGCATCGCCGGACTGTATTCGGGCGTCAACTCGGCACTCTTCGGAATCAGC
GTCACAAATTTCGTCTACTATTTCTGGTACGAGTGGACGAGGGGCTCCTTTGAGCGCGCCGCTCGCTCGGCCGGG
CGGGCGGGAAAGAAGCTCTCAACCATCGAGTCGATGATAGCCGGTGCCATCGCCGGGTCGGCCACCGTCATAATC
ACCAATCCAATCTGGGTCGTCAACACCAGAGTAACCACTCGTCAGCAGAGCGTGCAAGGACAAGACGTCGAGGCC
GCTGCCACAGGTCGACGTCGGCGTGTCACCCCCTCAACCATCGGCACCCTCATGTCGCTGCTCCGCAACGAAGGT
CCGCAGGCGCTCTTCGCCGGCGTCATCCCCGCTCTCGTCCTCGTCATAAACCCGATTCTGCAATATACCTTTTTC
GAGCAGATGAAGAACGCCGTCGAGAAGCGGCAGAGGGCCGTCACTCCCACCATTGCCTTCGTTCTCGGTGCGCTG
GGCAAGCTGCTCGCCACGTCTGTCACGTACCCGTACATTACCGTCAAGAGTCAGATGCATGTCGCGGGACACAGT
AACAGCAAGAAAGAGGGCATGTCTCAGGCTCTGCGCCGCGTCATCGGGGACGAGGGCTACGCCGGCCTCTACAAG
GGTATCGGTCCCAAGGTCACCCAGAGCGTTCTGACGGCTGCCTTGCTCTTCGCCTTCAAGGACTTTCTGTACGAG
CAGACGGTCAGGCTTCGCACGTCGGCTGCTCGAAAGCGTCTCGCCGTCTAG
Gene >Ophcf2|06646
ATGACCGCTTCACAGAACGACAACGTCGCCCACGCCCTCGCCGGCGCCGGCGGAGGCATCCTCTCCATGATGTTA
ACGTACGCGCCCTCCAACAGCCGTGTCCTCACCGACGACGCGTCATGACTGAATGCTCATCACAGATATCCGCTC
ATCACGCTCTCGACACGCGCACAGGTCGAGTCCACCAAAGCGGAGACGGGCTTCGTCGCCGCCGTCCGTCGCATC
GTCGCCCGCGAGGGCATCGCCGGACTGTATTCGGGCGTCAACTCGGCACTCTTCGGAATCAGCGTCACAAATTTC
GTCTACTATTTCTGGTACGAGTGGACGAGGGGCTCCTTTGAGCGCGCCGCTCGCTCGGCCGGGCGGGCGGGAAAG
AAGCTCTCAACCATCGAGTCGATGATAGCCGGTGCCATCGCCGGGTCGGCCACCGTCATAATCACCAATCCAATC
TGGGTCGTCAACACCAGAGTAACCACTCGTCAGCAGAGCGTGCAAGGACAAGACGTCGAGGCCGCTGCCACAGGT
CGACGTCGGCGTGTCACCCCCTCAACCATCGGCACCCTCATGTCGCTGCTCCGCAACGAAGGTCCGCAGGCGCTC
TTCGCCGGCGTCATCCCCGCTCTCGTCCTCGTCATAAACCCGATTCTGCAATATACCTTTTTCGAGCAGATGAAG
AACGCCGTCGAGAAGCGGCAGAGGGCCGTCACTCCCACCATTGCCTTCGTTCTCGGTGCGCTGGGCAAGCTGCTC
GCCACGTCTGTCACGTACCCGTACATTACCGTCAAGAGTCAGATGCATGTCGCGGGACACAGTAACAGCAAGAAA
GAGGGCATGTCTCAGGCTCTGCGCCGCGTCATCGGGGACGAGGGCTACGCCGGCCTCTACAAGGGTGAGTTCTCC
GTGGCTGTCTTTGGACCGGCCGCTAAATGATCATCTGCAGGTATCGGTCCCAAGGTCACCCAGAGCGTTCTGACG
GCTGCCTTGCTCTTCGCCTTCAAGGACTTTCTGTACGAGCAGACGGTCAGGCTTCGCACGTCGGCTGCTCGAAAG
CGTCTCGCCGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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