Protein ID | Ophcf2|06627 |
Gene name | |
Location | scaffold_08:637210..641052 |
Strand | - |
Gene length (bp) | 3842 |
Transcript length (bp) | 1416 |
Coding sequence length (bp) | 1416 |
Protein length (aa) | 472 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 38 | 60 | 22 |
2 | 91 | 113 | 22 |
3 | 134 | 156 | 22 |
4 | 171 | 193 | 22 |
5 | 214 | 236 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 17.62 | 8.26 | 26.98 |
Alive | In ants, during behavior modification | 6.22 | 1.80 | 10.64 |
Dead | In ants, recently dead | 6.47 | 2.11 | 10.83 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.000238 | yes |
Alive | Dead | 0.910820 | no |
Dead | Fungus | 0.000238 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06627 MPELEVLLVGAVGEGGRGSRRACVTKAPALYSWRRLPLVTWLVLAIYLDSYVFVFASAVLQHGVGLDSVGTCDGA ILLCLVCYVTTKVQPPILFWGGGGLSLGLQIFLYLFLVEKAHMMRPTPKSRFRSRLYMFNSMGMLGVYIVVVVVN FVFRIAEIRNGACVIGMRSVAMIPLISFDTVANVYLTGLFLVPLTRLYTFRHMARSPANIRLRSAAIRTFCGAVF TLVSSIVNLSVLMALDGEPGWVCLMCCNCDILFSACVLHWITSNDKSTTSSSTSSRNTAPTPCRLRSTTPVNAAA SSPFSQQQQQQQQQQQQRPSPESLASSGRAVVVTTTIRHEKPPVSPRTPGLPGLPPSPPLTPPESETAEVLLRTR LGAAKDRLLAANIDRALRQDRTARALLLQRLHWQRLSLLSDPVTAAIARQRLVQLQSGIGLYLASLSTDQALASY AVRLADIGLVDRASLSLTGPL* |
Coding | >Ophcf2|06627 ATGCCAGAGTTGGAAGTCCTTTTGGTCGGAGCCGTCGGGGAGGGGGGCCGGGGATCGCGTCGGGCTTGTGTCACA AAAGCTCCAGCCCTATACTCCTGGCGCCGCCTCCCGCTCGTCACCTGGCTGGTGCTGGCCATCTACCTCGACTCG TACGTCTTCGTCTTCGCCTCGGCGGTGCTGCAGCATGGTGTCGGTTTGGATAGTGTCGGGACGTGCGATGGCGCG ATTCTGCTGTGCTTGGTTTGCTATGTTACCACCAAGGTGCAACCCCCGATTCTCTTTTGGGGGGGGGGGGGTTTG AGCTTAGGATTGCAGATTTTCCTCTACCTCTTTCTCGTCGAAAAGGCCCATATGATGCGGCCGACGCCCAAGTCT CGTTTCCGGTCGAGGCTTTACATGTTCAACTCGATGGGCATGCTGGGAGTCTACATTGTCGTCGTCGTCGTCAAC TTCGTCTTCCGTATTGCGGAAATCAGAAACGGGGCTTGCGTCATTGGCATGCGGAGCGTTGCCATGATTCCTCTC ATTTCCTTTGACACCGTCGCCAACGTTTACCTTACCGGCCTGTTTCTCGTGCCTCTTACCCGCCTCTACACGTTC CGCCATATGGCTCGCAGCCCGGCCAATATCCGGCTCCGTTCGGCCGCCATCCGCACCTTTTGCGGCGCCGTCTTC ACCCTCGTCAGCAGCATTGTGAACCTTTCGGTGTTGATGGCGTTGGATGGGGAGCCTGGGTGGGTTTGTTTAATG TGTTGCAATTGTGATATTCTCTTCTCCGCTTGCGTCCTCCACTGGATAACATCAAACGACAAATCCACGACATCA AGCAGCACCTCATCCCGCAACACCGCCCCGACCCCCTGCCGCCTCCGCTCCACGACGCCCGTCAACGCAGCAGCC TCGTCTCCGTTCTCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCCATCCCCCGAGTCGTTGGCG TCTTCGGGGCGTGCAGTGGTTGTGACGACGACGATTCGACATGAGAAACCCCCGGTCTCCCCGAGAACCCCCGGT CTCCCCGGTCTCCCCCCGTCTCCCCCCCTCACCCCCCCCGAATCCGAAACAGCAGAAGTCCTCCTCCGCACCCGC CTCGGAGCCGCCAAAGACAGACTCCTAGCCGCCAACATCGACCGAGCCCTCCGCCAAGACAGAACTGCCCGCGCC CTGCTGCTTCAGAGGCTGCACTGGCAGAGGCTCAGCCTCCTCTCCGACCCCGTCACGGCCGCCATCGCCCGCCAG AGGTTGGTCCAGCTGCAGTCTGGCATTGGCCTCTATCTCGCCAGCTTGTCGACGGATCAGGCCTTGGCGTCGTAC GCTGTCAGGCTGGCCGATATCGGGCTCGTCGACCGGGCTTCTCTGAGTCTGACTGGGCCTCTTTGA |
Transcript | >Ophcf2|06627 ATGCCAGAGTTGGAAGTCCTTTTGGTCGGAGCCGTCGGGGAGGGGGGCCGGGGATCGCGTCGGGCTTGTGTCACA AAAGCTCCAGCCCTATACTCCTGGCGCCGCCTCCCGCTCGTCACCTGGCTGGTGCTGGCCATCTACCTCGACTCG TACGTCTTCGTCTTCGCCTCGGCGGTGCTGCAGCATGGTGTCGGTTTGGATAGTGTCGGGACGTGCGATGGCGCG ATTCTGCTGTGCTTGGTTTGCTATGTTACCACCAAGGTGCAACCCCCGATTCTCTTTTGGGGGGGGGGGGGTTTG AGCTTAGGATTGCAGATTTTCCTCTACCTCTTTCTCGTCGAAAAGGCCCATATGATGCGGCCGACGCCCAAGTCT CGTTTCCGGTCGAGGCTTTACATGTTCAACTCGATGGGCATGCTGGGAGTCTACATTGTCGTCGTCGTCGTCAAC TTCGTCTTCCGTATTGCGGAAATCAGAAACGGGGCTTGCGTCATTGGCATGCGGAGCGTTGCCATGATTCCTCTC ATTTCCTTTGACACCGTCGCCAACGTTTACCTTACCGGCCTGTTTCTCGTGCCTCTTACCCGCCTCTACACGTTC CGCCATATGGCTCGCAGCCCGGCCAATATCCGGCTCCGTTCGGCCGCCATCCGCACCTTTTGCGGCGCCGTCTTC ACCCTCGTCAGCAGCATTGTGAACCTTTCGGTGTTGATGGCGTTGGATGGGGAGCCTGGGTGGGTTTGTTTAATG TGTTGCAATTGTGATATTCTCTTCTCCGCTTGCGTCCTCCACTGGATAACATCAAACGACAAATCCACGACATCA AGCAGCACCTCATCCCGCAACACCGCCCCGACCCCCTGCCGCCTCCGCTCCACGACGCCCGTCAACGCAGCAGCC TCGTCTCCGTTCTCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCCATCCCCCGAGTCGTTGGCG TCTTCGGGGCGTGCAGTGGTTGTGACGACGACGATTCGACATGAGAAACCCCCGGTCTCCCCGAGAACCCCCGGT CTCCCCGGTCTCCCCCCGTCTCCCCCCCTCACCCCCCCCGAATCCGAAACAGCAGAAGTCCTCCTCCGCACCCGC CTCGGAGCCGCCAAAGACAGACTCCTAGCCGCCAACATCGACCGAGCCCTCCGCCAAGACAGAACTGCCCGCGCC CTGCTGCTTCAGAGGCTGCACTGGCAGAGGCTCAGCCTCCTCTCCGACCCCGTCACGGCCGCCATCGCCCGCCAG AGGTTGGTCCAGCTGCAGTCTGGCATTGGCCTCTATCTCGCCAGCTTGTCGACGGATCAGGCCTTGGCGTCGTAC GCTGTCAGGCTGGCCGATATCGGGCTCGTCGACCGGGCTTCTCTGAGTCTGACTGGGCCTCTTTGA |
Gene | >Ophcf2|06627 ATGCCAGAGTTGGAAGTCCTTTTGGTCGGAGCCGTCGGGGAGGGGGGCCGGGGATCGCGTCGGGCTTGTGTGTGT GTGTGTGTTACTGGAAGGATGGATGGAAGGACGGATGGACGGACAGATGAACGGGATGGACGGATGAAAGGGAGG GAGGCGTTGTGGTGGATGGTTTGCGGCTGAGGAGACGCCACGGGCTTGATATTGATGGCTGAGGAGGAAGGAGGA AGATTACGGGGGATTTCGGTGTATGAGATATCCAATAGTTGTTAGAAGAGGCGAGAAGGCTGCTGTAGCTGTAAT GTGGCTACAAGTAGTTGACGGAAGTTTGCAAGCCTCATGTCATTGTGAAAGACGGTCGCACAGCATCATCGTGGC TTTGGAGAACAGTCGTGTGAGAAGGGGGCAAGCTCAGGCGAGAAGAAGAAGCCGGATGCGACTGTCAGAAGGGGG AGGATGAGGCAGGAGAGTATAGGACATAGGCAGATGCAGACGCAGAAGAAGGAGCAGAAGAAGGAGCAGAATGAG CAGAAGCAGAATGAGCAGAAGCAGAAGAAGGGACAGAAGCAAGAAGCAGATGCTGGGGAGCCCCATCTCGAGCAT CGTCATGGCTGATGTTCCCTCGGGGGGAAAGGTTGTGAGCGTCGGTTTGGGGATTGTTGCTGCGACGGTGCTTTC GGTTTGTCTCTGTGGGTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTGGCATCTCT GCTTTTGGATTTTTGTTGGGGGTTGTGTGGTTTGGGGGGTTCTCGTTTCTTCGTCTTTGGTTAATCTTGTTTAAC CCTTTTGGCCTCTTTCAACTTCTGTCAGCTTCCACGCCCCTCCATCATCGTCAACCCCCATCGACCTCCATACCT CGTCTGTCATCATCAACCTCCCATCACCCTCCATCTCCCTCCATCACCCTCAACCTCCCTCCATCATCTTCACCC TCCGTCAACCTCCGCTTCCCTCCATCACCACCACCCTCCACCACCCTCCCCTCGTCCAACTCCCTCGTCCAACTC CAAACCACCCAACTAACTTCCCGCCCCCAGCACAAAAGCTCCAGCCCTATACTCCTGGCGCCGCCTCCCGCTCGT CACCTGGCGTGAGTCCCTTCCCCCCCCCTTTCTCGAACCAAGCCGACGGAACCAGTGGTGCTGGCCATCTACCTC GACTCGTACGTCTTCGTCTTCGCCTCGGCGGTGCTGCAGCATGGTGTCGGTTTGGATAGTGTCGGGACGTGCGAT GGCGCGATTCTGCTGTGCTTGGTTTGCTATGTTACCACCAAGGTGCAACCCCCGATTCTCTTTTGGGGGGGGGGG GGTTTGAGCTTAGGATTGCAGATTGTGAGTTTCTTGGCTTGAGTGCTTTGGGACGGTTCTTACAGCTGGGGCAGT TCCTCTACCTCTTTCTCGTCGAAAAGGCCGTTTGTTTCCCCCTTTTCAACTCGGGTGTCGAGAGAGGGGGGAAGG GAACTGACGAAGATGTAGCATATGATGCGGCCGACGCCCAAGTCTCGTTTCCGGTCGAGGCTTTACATGTTCAAC TCGATGGGCATGCTGGGAGTCTACATTGTCGTCGTCGTCGTCAACTTCGTCTTGTTTGGTTTCCCCCTTCCCTAC GGTCATGATGGTTGCAGCTGTGCTCACGGAGGGATAGCCGTATTGCGGAAATCAGAAACGGGGCTTGCGTCATTG GCATGCGGAGCGTTGCCATGATTCCTCTCATTTCCTTTGACACCGTCGCCAACGTTTACCTTACCGGCCTGTTTC TCGTGCCTCTTACCCGTCAAGCCCCTTCCCCCTTCTCCTCGCCCCGTCCTCTCGAAAGGTGCAGATACTGACGAG ATGAAGGCCTCTACACGTTCCGCCATATGGCTCGCAGCCCGGCCAATATCCGGCTCCGTTCGGCCGCCATCCGCA CCTTTTGCGGCGCCGTCTTCACCCTCGTCAGCAGCATTGTGTGAGTCGGGCGCTTGGCTTTTGACCATGGGGGTC GAGCTGACGGGTCAGGAACCTTTCGGTGTTGATGGCGTTGGATGGGGAGCCTGGGTGGGTTTGTTTAATGTGTTG CAATTGTGATAGTTGGTTGCCTTTTTTTTCTTTTCTTTTTCTTTTTGCTGTTGCTTGCCGTCAACTCGACTTTTC TTTTACTTTACACAACTCCTCCCCCCTCCTCTCCATTCTCTCCTCTCTATCTAACACGCTCAGTTCTCTTCTCCG CTTGCGTCCTCCACTGGATAACATCAAACGACAAATCCACGACATCAAGCAGCACCTCATCCCGCAACACCGCCC CGACCCCCTGCCGCCTCCGCTCCACGACGCCCGTCAACGCAGCAGCCTCGTCTCCGTTCTCACAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCGGCCATCCCCCGAGTCGTTGGCGTCTTCGGGGCGTGCAGTGGTTGTGACGA CGACGATTCGACATGAGAGTAGGCCGTTGCATCACGAGCGGCAGCCGTCGTCGGATGTGGATGGGGCTCGTGATG GGACTCGGACGGTTATCGTTGCGGGGGGTGGGAATAAGACGGGGGTCTCTTTTTCGGTGCTTTGAAGAGGGAGGG GGTTTTGGGTTTGGTTTCTTGCTGGGTTAGTTGGGGTTCGTAAGTCTAGAGTAACAAGACGAGCCAGCAACTAGA CATGCATCTTGGGAACTTTTGCCGCATCGACGAGTCCATAACGGTGGGGCGTGGCAGGGCTGAGCCGAGCTCGAG TCGTGCGTCTGCTGCTTGTGTTTGAGTCGTGGGCGGCATGTGATGATGTCCTGGGATGGGATGAGACGGTTAAAG TAGCGCATCTTGTTCATTCGACATGTTCGTTACGGATCGTCAGTTTTCTGAAGGAAACATTCACCTCTGCGGTGC ATGTATGCATGTATGTATGCATGTATGTATGCATGCATGTATAGTATGTAAACAAGAGTCTTGATAGACAACTCC ATCTTCACTCAACACCCAACCCAATCCCACAAGCAACTCCAACTCCCAACTCCCAACGGCATCCTCGGATCCCTC ACGACTCGTCGCAAAGACCAACCCCCATCAAGGCGCAGCAACTCAGCGCGACTCACAAACCCCGGAAACTAAGGG TATATCCCCCCCCCCAAACCCAAACCCTCCAGCCAGACAAGACGGACAAATCGAGCTATCCCCCATGTTCATCCC AACTTCCCGGGCAAGATGCTGATGCGTACTCAGAGATGGCTATCCCCCCTCCTCCTCTTCCACCTCCTCCTCGCA ACTCTCCTCTTCGTCATTCCCATCCTCGCCATCGGCCCTTCGCTGCGAGGCTCGCTCGATCCATCTCTTACCGGG AAACCCTTCGACCGACTGCTTGACGAGAACCTCACCACCGGAAAGACGAGACTCCCTCCCCGAGTCCCCGAGAAC CCCCGGTCTCCCCGAGAACCCCCGGTCTCCCCGGTCTCCCCCCGTCTCCCCCCCTCACCCCCCCCGAATCCGAAA CAGCAGAAGTCCTCCTCCGCACCCGCCTCGGAGCCGCCAAAGACAGACTCCTAGCCGCCAACATCGACCGAGCCC TCCGCCAAGACAGAACTGCCCGCGCCCTGCTGCTTCAGAGGCTGCACTGGCAGAGGCTCAGCCTCCTCTCCGACC CCGTCACGGCCGCCATCGCCCGCCAGAGGTTGGTCCAGCTGCAGTCTGGCATTGGCCTCTATCTCGCCAGCTTGT CGACGGATCAGGCCTTGGCGTCGTACGCTGTCAGGCTGGCCGATATCGGGCTCGTCGACCGGGCTTCTCTGAGTC TGACTGGGCCTCTTTGA |