Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06627
Gene name
Locationscaffold_08:637210..641052
Strand-
Gene length (bp)3842
Transcript length (bp)1416
Coding sequence length (bp)1416
Protein length (aa) 472

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 38 60 22
2 91 113 22
3 134 156 22
4 171 193 22
5 214 236 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 17.62 8.26 26.98
Alive In ants, during behavior modification 6.22 1.80 10.64
Dead In ants, recently dead 6.47 2.11 10.83

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.000238 yes
Alive Dead 0.910820 no
Dead Fungus 0.000238 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06627
MPELEVLLVGAVGEGGRGSRRACVTKAPALYSWRRLPLVTWLVLAIYLDSYVFVFASAVLQHGVGLDSVGTCDGA
ILLCLVCYVTTKVQPPILFWGGGGLSLGLQIFLYLFLVEKAHMMRPTPKSRFRSRLYMFNSMGMLGVYIVVVVVN
FVFRIAEIRNGACVIGMRSVAMIPLISFDTVANVYLTGLFLVPLTRLYTFRHMARSPANIRLRSAAIRTFCGAVF
TLVSSIVNLSVLMALDGEPGWVCLMCCNCDILFSACVLHWITSNDKSTTSSSTSSRNTAPTPCRLRSTTPVNAAA
SSPFSQQQQQQQQQQQQRPSPESLASSGRAVVVTTTIRHEKPPVSPRTPGLPGLPPSPPLTPPESETAEVLLRTR
LGAAKDRLLAANIDRALRQDRTARALLLQRLHWQRLSLLSDPVTAAIARQRLVQLQSGIGLYLASLSTDQALASY
AVRLADIGLVDRASLSLTGPL*
Coding >Ophcf2|06627
ATGCCAGAGTTGGAAGTCCTTTTGGTCGGAGCCGTCGGGGAGGGGGGCCGGGGATCGCGTCGGGCTTGTGTCACA
AAAGCTCCAGCCCTATACTCCTGGCGCCGCCTCCCGCTCGTCACCTGGCTGGTGCTGGCCATCTACCTCGACTCG
TACGTCTTCGTCTTCGCCTCGGCGGTGCTGCAGCATGGTGTCGGTTTGGATAGTGTCGGGACGTGCGATGGCGCG
ATTCTGCTGTGCTTGGTTTGCTATGTTACCACCAAGGTGCAACCCCCGATTCTCTTTTGGGGGGGGGGGGGTTTG
AGCTTAGGATTGCAGATTTTCCTCTACCTCTTTCTCGTCGAAAAGGCCCATATGATGCGGCCGACGCCCAAGTCT
CGTTTCCGGTCGAGGCTTTACATGTTCAACTCGATGGGCATGCTGGGAGTCTACATTGTCGTCGTCGTCGTCAAC
TTCGTCTTCCGTATTGCGGAAATCAGAAACGGGGCTTGCGTCATTGGCATGCGGAGCGTTGCCATGATTCCTCTC
ATTTCCTTTGACACCGTCGCCAACGTTTACCTTACCGGCCTGTTTCTCGTGCCTCTTACCCGCCTCTACACGTTC
CGCCATATGGCTCGCAGCCCGGCCAATATCCGGCTCCGTTCGGCCGCCATCCGCACCTTTTGCGGCGCCGTCTTC
ACCCTCGTCAGCAGCATTGTGAACCTTTCGGTGTTGATGGCGTTGGATGGGGAGCCTGGGTGGGTTTGTTTAATG
TGTTGCAATTGTGATATTCTCTTCTCCGCTTGCGTCCTCCACTGGATAACATCAAACGACAAATCCACGACATCA
AGCAGCACCTCATCCCGCAACACCGCCCCGACCCCCTGCCGCCTCCGCTCCACGACGCCCGTCAACGCAGCAGCC
TCGTCTCCGTTCTCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCCATCCCCCGAGTCGTTGGCG
TCTTCGGGGCGTGCAGTGGTTGTGACGACGACGATTCGACATGAGAAACCCCCGGTCTCCCCGAGAACCCCCGGT
CTCCCCGGTCTCCCCCCGTCTCCCCCCCTCACCCCCCCCGAATCCGAAACAGCAGAAGTCCTCCTCCGCACCCGC
CTCGGAGCCGCCAAAGACAGACTCCTAGCCGCCAACATCGACCGAGCCCTCCGCCAAGACAGAACTGCCCGCGCC
CTGCTGCTTCAGAGGCTGCACTGGCAGAGGCTCAGCCTCCTCTCCGACCCCGTCACGGCCGCCATCGCCCGCCAG
AGGTTGGTCCAGCTGCAGTCTGGCATTGGCCTCTATCTCGCCAGCTTGTCGACGGATCAGGCCTTGGCGTCGTAC
GCTGTCAGGCTGGCCGATATCGGGCTCGTCGACCGGGCTTCTCTGAGTCTGACTGGGCCTCTTTGA
Transcript >Ophcf2|06627
ATGCCAGAGTTGGAAGTCCTTTTGGTCGGAGCCGTCGGGGAGGGGGGCCGGGGATCGCGTCGGGCTTGTGTCACA
AAAGCTCCAGCCCTATACTCCTGGCGCCGCCTCCCGCTCGTCACCTGGCTGGTGCTGGCCATCTACCTCGACTCG
TACGTCTTCGTCTTCGCCTCGGCGGTGCTGCAGCATGGTGTCGGTTTGGATAGTGTCGGGACGTGCGATGGCGCG
ATTCTGCTGTGCTTGGTTTGCTATGTTACCACCAAGGTGCAACCCCCGATTCTCTTTTGGGGGGGGGGGGGTTTG
AGCTTAGGATTGCAGATTTTCCTCTACCTCTTTCTCGTCGAAAAGGCCCATATGATGCGGCCGACGCCCAAGTCT
CGTTTCCGGTCGAGGCTTTACATGTTCAACTCGATGGGCATGCTGGGAGTCTACATTGTCGTCGTCGTCGTCAAC
TTCGTCTTCCGTATTGCGGAAATCAGAAACGGGGCTTGCGTCATTGGCATGCGGAGCGTTGCCATGATTCCTCTC
ATTTCCTTTGACACCGTCGCCAACGTTTACCTTACCGGCCTGTTTCTCGTGCCTCTTACCCGCCTCTACACGTTC
CGCCATATGGCTCGCAGCCCGGCCAATATCCGGCTCCGTTCGGCCGCCATCCGCACCTTTTGCGGCGCCGTCTTC
ACCCTCGTCAGCAGCATTGTGAACCTTTCGGTGTTGATGGCGTTGGATGGGGAGCCTGGGTGGGTTTGTTTAATG
TGTTGCAATTGTGATATTCTCTTCTCCGCTTGCGTCCTCCACTGGATAACATCAAACGACAAATCCACGACATCA
AGCAGCACCTCATCCCGCAACACCGCCCCGACCCCCTGCCGCCTCCGCTCCACGACGCCCGTCAACGCAGCAGCC
TCGTCTCCGTTCTCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCCATCCCCCGAGTCGTTGGCG
TCTTCGGGGCGTGCAGTGGTTGTGACGACGACGATTCGACATGAGAAACCCCCGGTCTCCCCGAGAACCCCCGGT
CTCCCCGGTCTCCCCCCGTCTCCCCCCCTCACCCCCCCCGAATCCGAAACAGCAGAAGTCCTCCTCCGCACCCGC
CTCGGAGCCGCCAAAGACAGACTCCTAGCCGCCAACATCGACCGAGCCCTCCGCCAAGACAGAACTGCCCGCGCC
CTGCTGCTTCAGAGGCTGCACTGGCAGAGGCTCAGCCTCCTCTCCGACCCCGTCACGGCCGCCATCGCCCGCCAG
AGGTTGGTCCAGCTGCAGTCTGGCATTGGCCTCTATCTCGCCAGCTTGTCGACGGATCAGGCCTTGGCGTCGTAC
GCTGTCAGGCTGGCCGATATCGGGCTCGTCGACCGGGCTTCTCTGAGTCTGACTGGGCCTCTTTGA
Gene >Ophcf2|06627
ATGCCAGAGTTGGAAGTCCTTTTGGTCGGAGCCGTCGGGGAGGGGGGCCGGGGATCGCGTCGGGCTTGTGTGTGT
GTGTGTGTTACTGGAAGGATGGATGGAAGGACGGATGGACGGACAGATGAACGGGATGGACGGATGAAAGGGAGG
GAGGCGTTGTGGTGGATGGTTTGCGGCTGAGGAGACGCCACGGGCTTGATATTGATGGCTGAGGAGGAAGGAGGA
AGATTACGGGGGATTTCGGTGTATGAGATATCCAATAGTTGTTAGAAGAGGCGAGAAGGCTGCTGTAGCTGTAAT
GTGGCTACAAGTAGTTGACGGAAGTTTGCAAGCCTCATGTCATTGTGAAAGACGGTCGCACAGCATCATCGTGGC
TTTGGAGAACAGTCGTGTGAGAAGGGGGCAAGCTCAGGCGAGAAGAAGAAGCCGGATGCGACTGTCAGAAGGGGG
AGGATGAGGCAGGAGAGTATAGGACATAGGCAGATGCAGACGCAGAAGAAGGAGCAGAAGAAGGAGCAGAATGAG
CAGAAGCAGAATGAGCAGAAGCAGAAGAAGGGACAGAAGCAAGAAGCAGATGCTGGGGAGCCCCATCTCGAGCAT
CGTCATGGCTGATGTTCCCTCGGGGGGAAAGGTTGTGAGCGTCGGTTTGGGGATTGTTGCTGCGACGGTGCTTTC
GGTTTGTCTCTGTGGGTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTGGCATCTCT
GCTTTTGGATTTTTGTTGGGGGTTGTGTGGTTTGGGGGGTTCTCGTTTCTTCGTCTTTGGTTAATCTTGTTTAAC
CCTTTTGGCCTCTTTCAACTTCTGTCAGCTTCCACGCCCCTCCATCATCGTCAACCCCCATCGACCTCCATACCT
CGTCTGTCATCATCAACCTCCCATCACCCTCCATCTCCCTCCATCACCCTCAACCTCCCTCCATCATCTTCACCC
TCCGTCAACCTCCGCTTCCCTCCATCACCACCACCCTCCACCACCCTCCCCTCGTCCAACTCCCTCGTCCAACTC
CAAACCACCCAACTAACTTCCCGCCCCCAGCACAAAAGCTCCAGCCCTATACTCCTGGCGCCGCCTCCCGCTCGT
CACCTGGCGTGAGTCCCTTCCCCCCCCCTTTCTCGAACCAAGCCGACGGAACCAGTGGTGCTGGCCATCTACCTC
GACTCGTACGTCTTCGTCTTCGCCTCGGCGGTGCTGCAGCATGGTGTCGGTTTGGATAGTGTCGGGACGTGCGAT
GGCGCGATTCTGCTGTGCTTGGTTTGCTATGTTACCACCAAGGTGCAACCCCCGATTCTCTTTTGGGGGGGGGGG
GGTTTGAGCTTAGGATTGCAGATTGTGAGTTTCTTGGCTTGAGTGCTTTGGGACGGTTCTTACAGCTGGGGCAGT
TCCTCTACCTCTTTCTCGTCGAAAAGGCCGTTTGTTTCCCCCTTTTCAACTCGGGTGTCGAGAGAGGGGGGAAGG
GAACTGACGAAGATGTAGCATATGATGCGGCCGACGCCCAAGTCTCGTTTCCGGTCGAGGCTTTACATGTTCAAC
TCGATGGGCATGCTGGGAGTCTACATTGTCGTCGTCGTCGTCAACTTCGTCTTGTTTGGTTTCCCCCTTCCCTAC
GGTCATGATGGTTGCAGCTGTGCTCACGGAGGGATAGCCGTATTGCGGAAATCAGAAACGGGGCTTGCGTCATTG
GCATGCGGAGCGTTGCCATGATTCCTCTCATTTCCTTTGACACCGTCGCCAACGTTTACCTTACCGGCCTGTTTC
TCGTGCCTCTTACCCGTCAAGCCCCTTCCCCCTTCTCCTCGCCCCGTCCTCTCGAAAGGTGCAGATACTGACGAG
ATGAAGGCCTCTACACGTTCCGCCATATGGCTCGCAGCCCGGCCAATATCCGGCTCCGTTCGGCCGCCATCCGCA
CCTTTTGCGGCGCCGTCTTCACCCTCGTCAGCAGCATTGTGTGAGTCGGGCGCTTGGCTTTTGACCATGGGGGTC
GAGCTGACGGGTCAGGAACCTTTCGGTGTTGATGGCGTTGGATGGGGAGCCTGGGTGGGTTTGTTTAATGTGTTG
CAATTGTGATAGTTGGTTGCCTTTTTTTTCTTTTCTTTTTCTTTTTGCTGTTGCTTGCCGTCAACTCGACTTTTC
TTTTACTTTACACAACTCCTCCCCCCTCCTCTCCATTCTCTCCTCTCTATCTAACACGCTCAGTTCTCTTCTCCG
CTTGCGTCCTCCACTGGATAACATCAAACGACAAATCCACGACATCAAGCAGCACCTCATCCCGCAACACCGCCC
CGACCCCCTGCCGCCTCCGCTCCACGACGCCCGTCAACGCAGCAGCCTCGTCTCCGTTCTCACAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCGGCCATCCCCCGAGTCGTTGGCGTCTTCGGGGCGTGCAGTGGTTGTGACGA
CGACGATTCGACATGAGAGTAGGCCGTTGCATCACGAGCGGCAGCCGTCGTCGGATGTGGATGGGGCTCGTGATG
GGACTCGGACGGTTATCGTTGCGGGGGGTGGGAATAAGACGGGGGTCTCTTTTTCGGTGCTTTGAAGAGGGAGGG
GGTTTTGGGTTTGGTTTCTTGCTGGGTTAGTTGGGGTTCGTAAGTCTAGAGTAACAAGACGAGCCAGCAACTAGA
CATGCATCTTGGGAACTTTTGCCGCATCGACGAGTCCATAACGGTGGGGCGTGGCAGGGCTGAGCCGAGCTCGAG
TCGTGCGTCTGCTGCTTGTGTTTGAGTCGTGGGCGGCATGTGATGATGTCCTGGGATGGGATGAGACGGTTAAAG
TAGCGCATCTTGTTCATTCGACATGTTCGTTACGGATCGTCAGTTTTCTGAAGGAAACATTCACCTCTGCGGTGC
ATGTATGCATGTATGTATGCATGTATGTATGCATGCATGTATAGTATGTAAACAAGAGTCTTGATAGACAACTCC
ATCTTCACTCAACACCCAACCCAATCCCACAAGCAACTCCAACTCCCAACTCCCAACGGCATCCTCGGATCCCTC
ACGACTCGTCGCAAAGACCAACCCCCATCAAGGCGCAGCAACTCAGCGCGACTCACAAACCCCGGAAACTAAGGG
TATATCCCCCCCCCCAAACCCAAACCCTCCAGCCAGACAAGACGGACAAATCGAGCTATCCCCCATGTTCATCCC
AACTTCCCGGGCAAGATGCTGATGCGTACTCAGAGATGGCTATCCCCCCTCCTCCTCTTCCACCTCCTCCTCGCA
ACTCTCCTCTTCGTCATTCCCATCCTCGCCATCGGCCCTTCGCTGCGAGGCTCGCTCGATCCATCTCTTACCGGG
AAACCCTTCGACCGACTGCTTGACGAGAACCTCACCACCGGAAAGACGAGACTCCCTCCCCGAGTCCCCGAGAAC
CCCCGGTCTCCCCGAGAACCCCCGGTCTCCCCGGTCTCCCCCCGTCTCCCCCCCTCACCCCCCCCGAATCCGAAA
CAGCAGAAGTCCTCCTCCGCACCCGCCTCGGAGCCGCCAAAGACAGACTCCTAGCCGCCAACATCGACCGAGCCC
TCCGCCAAGACAGAACTGCCCGCGCCCTGCTGCTTCAGAGGCTGCACTGGCAGAGGCTCAGCCTCCTCTCCGACC
CCGTCACGGCCGCCATCGCCCGCCAGAGGTTGGTCCAGCTGCAGTCTGGCATTGGCCTCTATCTCGCCAGCTTGT
CGACGGATCAGGCCTTGGCGTCGTACGCTGTCAGGCTGGCCGATATCGGGCTCGTCGACCGGGCTTCTCTGAGTC
TGACTGGGCCTCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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