Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06610
Gene name
Locationscaffold_08:583751..584662
Strand+
Gene length (bp)911
Transcript length (bp)792
Coding sequence length (bp)792
Protein length (aa) 264

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01168 Ala_racemase_N Alanine racemase, N-terminal domain 8.0E-22 28 254

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Mitochondrion Mitochondrial transit peptide 0.7847 0.3843 0.0272 0.0557 0.7733 0.1287 0.3388 0.3596 0.1768 0.0129

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup3860
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3900
Ophiocordyceps australis map64 (Brazil) OphauB2|6519
Ophiocordyceps camponoti-floridani Ophcf2|06610 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|3231
Ophiocordyceps kimflemingae Ophio5|5013
Ophiocordyceps subramaniannii Hirsu2|7649

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06610
MSETSDEMRIDPARAEALFSRLASVKDRIAAQAQGRNVRLVAVSKLKPANDILALHREPGSHVHFGENYAQELSQ
KAPLLPRSIQWHYIGGLQSGRCKTLAKIPNLFCVSSVDSSKKAHLLESARAELLASDSSISQLSVHVQVNTSAEE
AKSGCPPGAETVALCRDIVESCPSLRLLGLMTIGAIARSKAAAEGDVNEDFVSLTKQRDLVAKELGLAPESLELS
MGMSEDFEGAIAMGSGEVRIGSTIFGLRPAKSDAKIQE*
Coding >Ophcf2|06610
ATGAGCGAGACCTCTGACGAGATGCGCATCGATCCCGCCCGCGCCGAAGCTCTCTTCTCCCGCCTGGCCTCTGTC
AAAGACCGCATCGCCGCCCAAGCCCAGGGACGGAATGTCCGTCTCGTCGCCGTCTCCAAGCTCAAGCCAGCAAAC
GACATCCTCGCTCTACACCGAGAGCCAGGCTCGCACGTTCACTTTGGCGAGAACTACGCTCAGGAACTGAGTCAA
AAGGCCCCTCTCCTCCCCCGCTCCATCCAATGGCATTACATCGGCGGCCTGCAGTCAGGCCGCTGTAAAACTCTC
GCCAAGATTCCCAACCTCTTCTGCGTCTCCAGCGTCGACTCGTCCAAGAAAGCCCACCTCCTTGAATCCGCCCGA
GCCGAGCTCCTCGCCTCGGACTCCTCGATATCCCAACTCTCGGTTCACGTCCAGGTCAACACGTCGGCCGAGGAG
GCCAAGTCCGGCTGCCCGCCCGGCGCCGAGACCGTCGCTCTGTGCCGCGACATCGTCGAGTCGTGCCCCAGCCTC
CGTCTGCTCGGCCTCATGACCATTGGTGCCATCGCCCGCAGCAAGGCCGCTGCCGAGGGTGACGTCAATGAGGAT
TTCGTCTCTCTGACGAAGCAGCGGGACCTAGTCGCCAAGGAGCTTGGTTTGGCACCGGAGAGCCTCGAGCTGAGC
ATGGGCATGAGCGAAGACTTTGAGGGTGCCATTGCCATGGGTAGCGGAGAGGTCAGAATCGGCAGCACCATCTTT
GGCCTCCGGCCGGCCAAGTCGGATGCCAAGATTCAAGAATGA
Transcript >Ophcf2|06610
ATGAGCGAGACCTCTGACGAGATGCGCATCGATCCCGCCCGCGCCGAAGCTCTCTTCTCCCGCCTGGCCTCTGTC
AAAGACCGCATCGCCGCCCAAGCCCAGGGACGGAATGTCCGTCTCGTCGCCGTCTCCAAGCTCAAGCCAGCAAAC
GACATCCTCGCTCTACACCGAGAGCCAGGCTCGCACGTTCACTTTGGCGAGAACTACGCTCAGGAACTGAGTCAA
AAGGCCCCTCTCCTCCCCCGCTCCATCCAATGGCATTACATCGGCGGCCTGCAGTCAGGCCGCTGTAAAACTCTC
GCCAAGATTCCCAACCTCTTCTGCGTCTCCAGCGTCGACTCGTCCAAGAAAGCCCACCTCCTTGAATCCGCCCGA
GCCGAGCTCCTCGCCTCGGACTCCTCGATATCCCAACTCTCGGTTCACGTCCAGGTCAACACGTCGGCCGAGGAG
GCCAAGTCCGGCTGCCCGCCCGGCGCCGAGACCGTCGCTCTGTGCCGCGACATCGTCGAGTCGTGCCCCAGCCTC
CGTCTGCTCGGCCTCATGACCATTGGTGCCATCGCCCGCAGCAAGGCCGCTGCCGAGGGTGACGTCAATGAGGAT
TTCGTCTCTCTGACGAAGCAGCGGGACCTAGTCGCCAAGGAGCTTGGTTTGGCACCGGAGAGCCTCGAGCTGAGC
ATGGGCATGAGCGAAGACTTTGAGGGTGCCATTGCCATGGGTAGCGGAGAGGTCAGAATCGGCAGCACCATCTTT
GGCCTCCGGCCGGCCAAGTCGGATGCCAAGATTCAAGAATGA
Gene >Ophcf2|06610
ATGAGCGAGACCTCTGACGAGATGCGCATCGATCCCGCCCGCGCCGAAGCTCTCTTCTCCCGCCTGGCCTCTGTC
AAAGACCGCATCGCCGCCCAAGCCCAGGGACGGAATGTGAATCCCTCTACGTCGAGGACACTAGAGAATCAAGCC
AGGCTGACTCCCGCTCACCAGGTCCGTCTCGTCGCCGTCTCCAAGCTCAAGCCAGCAAACGACATCCTCGCTCTA
CACCGAGAGCCAGGCTCGCACGTTCACTTTGGCGAGAACTACGCTCAGGAACTGAGTCAAAAGGCCCCTCTCCTC
CCCCGCTCCATCCAATGGCATTACATCGGCGGCCTGCAGTCAGGTGAGCTCTCTCTTCACCTCTTCATCTTGTAT
CTAGCTGACCGCATCACCCCTCAAAAGGCCGCTGTAAAACTCTCGCCAAGATTCCCAACCTCTTCTGCGTCTCCA
GCGTCGACTCGTCCAAGAAAGCCCACCTCCTTGAATCCGCCCGAGCCGAGCTCCTCGCCTCGGACTCCTCGATAT
CCCAACTCTCGGTTCACGTCCAGGTCAACACGTCGGCCGAGGAGGCCAAGTCCGGCTGCCCGCCCGGCGCCGAGA
CCGTCGCTCTGTGCCGCGACATCGTCGAGTCGTGCCCCAGCCTCCGTCTGCTCGGCCTCATGACCATTGGTGCCA
TCGCCCGCAGCAAGGCCGCTGCCGAGGGTGACGTCAATGAGGATTTCGTCTCTCTGACGAAGCAGCGGGACCTAG
TCGCCAAGGAGCTTGGTTTGGCACCGGAGAGCCTCGAGCTGAGCATGGGCATGAGCGAAGACTTTGAGGGTGCCA
TTGCCATGGGTAGCGGAGAGGTCAGAATCGGCAGCACCATCTTTGGCCTCCGGCCGGCCAAGTCGGATGCCAAGA
TTCAAGAATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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