Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06574
Gene name
Locationscaffold_08:476647..477494
Strand+
Gene length (bp)847
Transcript length (bp)792
Coding sequence length (bp)792
Protein length (aa) 264

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PFAM Domains

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 54 0.5

Transmembrane Domains

Domain # Start End Length
1 223 245 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06574
MISSRASHIRRTPQPIPSHLQPCTPIVDVPATPPIVLLLHLLLLLTTPTIVQANIEKVIFPGPPANTPLTDANLD
SLTPQRSVLRTNLSRVFPAAEGLAFRGQSSWLLLHDLVEGQRYELRVCWATVEPTSFALDLYHLHHVWRTPELNQ
SLNDYASSRRGVIDTIVPSHQQLPERKTSALLLHVRAAANYFTDDHQLMKLPPPVLVDLILDPYLYNVVPRSLVP
IAGYLVLVGVVTWFLAQGIASSLESVAASSQRHANKCD*
Coding >Ophcf2|06574
ATGATCTCATCCCGGGCTTCCCACATCAGACGAACACCGCAACCGATTCCATCCCATCTACAGCCATGCACCCCA
ATCGTCGACGTCCCCGCTACCCCCCCCATCGTCCTCCTCCTCCACCTCCTCCTGCTCCTCACCACACCAACAATC
GTCCAAGCCAACATCGAAAAGGTCATCTTCCCCGGCCCTCCCGCCAACACGCCGCTCACCGACGCCAACCTCGAC
TCCCTCACCCCACAGCGCTCCGTGCTCCGCACCAACCTAAGCCGCGTCTTCCCTGCCGCAGAGGGGCTCGCTTTC
CGTGGTCAGTCGTCGTGGCTGCTTCTGCATGACCTTGTCGAGGGGCAGAGATACGAGTTGCGCGTTTGCTGGGCT
ACCGTCGAACCGACAAGCTTCGCACTCGACCTTTATCATCTCCATCATGTCTGGCGTACGCCCGAGCTCAACCAA
TCCCTCAACGATTATGCGTCCTCGCGACGTGGTGTAATAGACACCATCGTGCCCAGCCATCAGCAGCTCCCAGAG
CGCAAGACGTCGGCCCTGCTCCTTCACGTCCGCGCCGCGGCTAACTACTTCACCGACGACCATCAACTCATGAAG
CTTCCTCCGCCCGTCCTGGTCGACCTCATCCTCGACCCGTATCTATACAACGTCGTTCCGCGGTCCCTGGTGCCC
ATCGCCGGCTACCTCGTTCTCGTTGGCGTCGTTACTTGGTTTCTTGCTCAAGGGATTGCCTCCAGCCTCGAGTCT
GTCGCCGCTTCTTCCCAACGACATGCCAACAAGTGTGACTAG
Transcript >Ophcf2|06574
ATGATCTCATCCCGGGCTTCCCACATCAGACGAACACCGCAACCGATTCCATCCCATCTACAGCCATGCACCCCA
ATCGTCGACGTCCCCGCTACCCCCCCCATCGTCCTCCTCCTCCACCTCCTCCTGCTCCTCACCACACCAACAATC
GTCCAAGCCAACATCGAAAAGGTCATCTTCCCCGGCCCTCCCGCCAACACGCCGCTCACCGACGCCAACCTCGAC
TCCCTCACCCCACAGCGCTCCGTGCTCCGCACCAACCTAAGCCGCGTCTTCCCTGCCGCAGAGGGGCTCGCTTTC
CGTGGTCAGTCGTCGTGGCTGCTTCTGCATGACCTTGTCGAGGGGCAGAGATACGAGTTGCGCGTTTGCTGGGCT
ACCGTCGAACCGACAAGCTTCGCACTCGACCTTTATCATCTCCATCATGTCTGGCGTACGCCCGAGCTCAACCAA
TCCCTCAACGATTATGCGTCCTCGCGACGTGGTGTAATAGACACCATCGTGCCCAGCCATCAGCAGCTCCCAGAG
CGCAAGACGTCGGCCCTGCTCCTTCACGTCCGCGCCGCGGCTAACTACTTCACCGACGACCATCAACTCATGAAG
CTTCCTCCGCCCGTCCTGGTCGACCTCATCCTCGACCCGTATCTATACAACGTCGTTCCGCGGTCCCTGGTGCCC
ATCGCCGGCTACCTCGTTCTCGTTGGCGTCGTTACTTGGTTTCTTGCTCAAGGGATTGCCTCCAGCCTCGAGTCT
GTCGCCGCTTCTTCCCAACGACATGCCAACAAGTGTGACTAG
Gene >Ophcf2|06574
ATGATCTCATCCCGGGCTTCCCACATCAGACGAACACCGCAACCGATTCCATCCCATCTACAGCCATGCACCCCA
ATCGTCGACGTCCCCGCTACCCCCCCCATCGTCCTCCTCCTCCACCTCCTCCTGCTCCTCACCACACCAACAATC
GTCCAAGCCAACATCGAAAAGGTCATCTTCCCCGGCCCTCCCGCCAACACGCCGCTCACCGACGCCAACCTCGAC
TCCCTCACCCCACAGCGCTCCGTGCTCCGCACCAACCTAAGCCGCGTCTTCCCTGCCGCAGAGGGGCTCGCTTTC
CGTGGTCAGTCGTCGTGGCTGCTTCTGCATGACCTTGTCGAGGGGCAGAGATACGAGTTGCGCGTTTGCTGGGCT
ACCGTCGTGAGTCATCCCGCGCTTGGGCACGCCTGGGGGGAAAGCGATATAACTTGCTCAGGAACCGACAAGCTT
CGCACTCGACCTTTATCATCTCCATCATGTCTGGCGTACGCCCGAGCTCAACCAATCCCTCAACGATTATGCGTC
CTCGCGACGTGGTGTAATAGACACCATCGTGCCCAGCCATCAGCAGCTCCCAGAGCGCAAGACGTCGGCCCTGCT
CCTTCACGTCCGCGCCGCGGCTAACTACTTCACCGACGACCATCAACTCATGAAGCTTCCTCCGCCCGTCCTGGT
CGACCTCATCCTCGACCCGTATCTATACAACGTCGTTCCGCGGTCCCTGGTGCCCATCGCCGGCTACCTCGTTCT
CGTTGGCGTCGTTACTTGGTTTCTTGCTCAAGGGATTGCCTCCAGCCTCGAGTCTGTCGCCGCTTCTTCCCAACG
ACATGCCAACAAGTGTGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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