Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06566
Gene name
Locationscaffold_08:460011..461191
Strand-
Gene length (bp)1180
Transcript length (bp)720
Coding sequence length (bp)720
Protein length (aa) 240

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01092 Ribosomal_S6e Ribosomal protein S6e 1.3E-54 1 126

GO

GO Term Description Terminal node
GO:0005840 ribosome Yes
GO:0006412 translation Yes
GO:0003735 structural constituent of ribosome Yes
GO:0009058 biosynthetic process No
GO:0044238 primary metabolic process No
GO:0019538 protein metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0043604 amide biosynthetic process No
GO:0043170 macromolecule metabolic process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0044260 cellular macromolecule metabolic process No
GO:0005575 cellular_component No
GO:1901576 organic substance biosynthetic process No
GO:0008152 metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0009987 cellular process No
GO:0110165 cellular anatomical entity No
GO:0044237 cellular metabolic process No
GO:0071704 organic substance metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0043229 intracellular organelle No
GO:0034645 cellular macromolecule biosynthetic process No
GO:0043043 peptide biosynthetic process No
GO:0003674 molecular_function No
GO:0006518 peptide metabolic process No
GO:0043603 cellular amide metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0008150 biological_process No
GO:0043226 organelle No
GO:0043228 non-membrane-bounded organelle No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0043232 intracellular non-membrane-bounded organelle No
GO:0005198 structural molecule activity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5628 0.2855 0.2456 0.0373 0.2336 0.0244 0.2329 0.0125 0.0032 0.0021

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5103
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2079
Ophiocordyceps australis map64 (Brazil) OphauB2|7488
Ophiocordyceps camponoti-floridani Ophcf2|06566 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|3632
Ophiocordyceps kimflemingae Ophio5|284
Ophiocordyceps subramaniannii Hirsu2|3179

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06566
MKLNISYPANGSQKLIDIEDERKLAVFMEKRMGAEVPGDTVGDEFKGYIFRITGGNDKQGFPMKQGVMHPSRVRL
LLSEGHSCYRPRRTGERRRKSVRGCIVGMDLSVLALSIVKQGEKNIPGLTDVVHPKRLGPKRATKIRKFFGLTKD
DDVRKYVIRREVQPKGEGKKPYTKAPKIQRLVTPQRLQHKRHRAALKRRQAEKVKDEANEYAQILAKRVAEAKAH
KADVRKRRASSMRK*
Coding >Ophcf2|06566
ATGAAGTTGAACATCAGCTACCCTGCCAACGGCAGCCAGAAGCTCATCGACATTGAAGATGAGCGCAAGCTCGCA
GTCTTCATGGAGAAGCGCATGGGCGCCGAAGTTCCAGGTGATACCGTCGGCGACGAATTCAAGGGCTACATCTTC
CGCATCACCGGCGGAAACGACAAGCAAGGCTTCCCCATGAAGCAGGGCGTCATGCACCCCAGTCGCGTCCGCCTG
CTTCTCTCCGAAGGGCACTCGTGCTATCGACCTCGCCGCACGGGCGAGCGCAGACGCAAGTCGGTCCGCGGCTGC
ATCGTCGGCATGGACCTTTCTGTCTTGGCTCTCAGCATCGTCAAGCAGGGCGAAAAAAATATCCCCGGCCTGACC
GACGTCGTTCACCCCAAGCGTCTTGGTCCCAAGCGCGCCACCAAGATCCGAAAGTTCTTCGGCCTCACCAAGGAT
GACGATGTCCGCAAATACGTCATCCGACGAGAAGTCCAGCCCAAAGGCGAAGGCAAGAAGCCCTACACCAAGGCC
CCCAAGATCCAGAGACTCGTCACCCCCCAGCGCCTCCAACACAAGCGCCACCGCGCCGCTCTCAAGAGGCGACAG
GCCGAGAAGGTCAAGGACGAGGCGAATGAATACGCCCAAATCCTGGCCAAGCGCGTAGCTGAGGCCAAGGCCCAC
AAGGCCGACGTCCGCAAGCGCCGGGCGAGCTCCATGCGCAAGTGA
Transcript >Ophcf2|06566
ATGAAGTTGAACATCAGCTACCCTGCCAACGGCAGCCAGAAGCTCATCGACATTGAAGATGAGCGCAAGCTCGCA
GTCTTCATGGAGAAGCGCATGGGCGCCGAAGTTCCAGGTGATACCGTCGGCGACGAATTCAAGGGCTACATCTTC
CGCATCACCGGCGGAAACGACAAGCAAGGCTTCCCCATGAAGCAGGGCGTCATGCACCCCAGTCGCGTCCGCCTG
CTTCTCTCCGAAGGGCACTCGTGCTATCGACCTCGCCGCACGGGCGAGCGCAGACGCAAGTCGGTCCGCGGCTGC
ATCGTCGGCATGGACCTTTCTGTCTTGGCTCTCAGCATCGTCAAGCAGGGCGAAAAAAATATCCCCGGCCTGACC
GACGTCGTTCACCCCAAGCGTCTTGGTCCCAAGCGCGCCACCAAGATCCGAAAGTTCTTCGGCCTCACCAAGGAT
GACGATGTCCGCAAATACGTCATCCGACGAGAAGTCCAGCCCAAAGGCGAAGGCAAGAAGCCCTACACCAAGGCC
CCCAAGATCCAGAGACTCGTCACCCCCCAGCGCCTCCAACACAAGCGCCACCGCGCCGCTCTCAAGAGGCGACAG
GCCGAGAAGGTCAAGGACGAGGCGAATGAATACGCCCAAATCCTGGCCAAGCGCGTAGCTGAGGCCAAGGCCCAC
AAGGCCGACGTCCGCAAGCGCCGGGCGAGCTCCATGCGCAAGTGA
Gene >Ophcf2|06566
ATGAAGGTACCGTCATCCTCCTCCTCCTCCTCCGGGAAAAAAAAAAAAAGACGTCTGGCCTTGTGTTCCCGCTGA
CATCTGGCGCAGTTGAACATCAGCTACCCTGCCAACGGCAGCCAGAAGCTCATCGACATTGAAGATGAGCGCAAG
CTCGCAGTCTTCATGGAGAAGCGCGTACGTCGACCCCATCCACCAAGCCGTCAAAGTCCCCTCCCGCTCATAATA
CCCCCTTAGATGGGCGCCGAAGTTCCAGGTGATACCGTCGGCGACGAATTCAAGGGCTACATCTTCCGCATCACC
GGCGGAAACGACAAGCAAGGCTTCCCCATGAAGCAGGGCGTCATGCACCCCAGTCGCGTCCGCCTGCTTCTCTCC
GAAGGGCACTCGTGCTATCGACCTCGCCGCACGGGCGAGCGCAGACGCAAGTCGGTCCGCGGCTGCATCGTCGGC
ATGGACCTTTCTGTCTTGGCTCTCAGCATCGTCAAGCAGGGCGAAAAAAATATCCCCGGCCTGACCGACGTCGTT
CACCCCAAGCGTCTTGGTCCCAAGCGCGCCACCAAGATCCGAAAGTTCTTCGGCCTCACCAAGGATGACGATGTA
TGTGTCTTCACGCTCCGCACCCATACTCGATCATCGCCTGCCCGGACTCGCCGTCCGGGTAGAGAGTGAGAGGAT
ATACAGCCCCCCCCCCCCCCCCCCTCCCCCCCAACCCACCCCCTCTCCTACATCCCGCCGTCGGCATGAGACAAA
GCCACGAGCGCATCTCTTCGTTCACACACTCTCACACACACACCACGAGGCGTTTAACTAATCTTCCGGGAAACA
ACTCCAGGTCCGCAAATACGTCATCCGACGAGAAGTCCAGCCCAAAGGCGAAGGCAAGAAGCCCTACACCAAGGC
CCCCAAGATCCAGAGACTCGTCACCCCCCAGCGCCTCCAACACAAGCGCCACCGCGCCGCTCTCAAGAGGCGACA
GGCCGAGAAGGTCAAGGACGAGGCGGTGAGTAGTTCCTCGTCCCTCCCCCTCCCCTTCCCCCGCCCAAGAATATC
GTTTGTCATCCCCTTCTGACTCTCCCCTTCGCAGAATGAATACGCCCAAATCCTGGCCAAGCGCGTAGCTGAGGC
CAAGGCCCACAAGGCCGACGTCCGCAAGCGCCGGGCGAGCTCCATGCGCAAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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