Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06552
Gene name
Locationscaffold_08:413180..414600
Strand-
Gene length (bp)1420
Transcript length (bp)1353
Coding sequence length (bp)1353
Protein length (aa) 451

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01733 Nucleoside_tran Nucleoside transporter 6.3E-42 142 447

GO

GO Term Description Terminal node
GO:0005337 nucleoside transmembrane transporter activity Yes
GO:1901642 nucleoside transmembrane transport Yes
GO:0016021 integral component of membrane Yes
GO:0031224 intrinsic component of membrane No
GO:0051234 establishment of localization No
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No
GO:0006810 transport No
GO:1901264 carbohydrate derivative transport No
GO:0071702 organic substance transport No
GO:1901505 carbohydrate derivative transmembrane transporter activity No
GO:0022857 transmembrane transporter activity No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0005575 cellular_component No
GO:0015931 nucleobase-containing compound transport No
GO:0003674 molecular_function No
GO:0071705 nitrogen compound transport No
GO:0015858 nucleoside transport No
GO:0055085 transmembrane transport No
GO:0015932 nucleobase-containing compound transmembrane transporter activity No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 67 0.5

Transmembrane Domains

Domain # Start End Length
1 36 58 22
2 73 92 19
3 105 127 22
4 137 159 22
5 172 194 22
6 220 242 22
7 284 306 22
8 356 375 19
9 388 410 22
10 425 447 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06552
MEGSRTAYRRLGTDMDDDDAGSVVTEGPPFSWLEYAIFGFLGVAMLWAWNMFLAAAPYFSSRFAADAWIEANFQS
AILASSTLVNLGTLVVLTKLQREASYTFRINLALVINTLVFALLTCSTALFLDASPSSYLAFLLLVVAAASWATG
LSQNGCFAFAASFGRPEYTQAIMAGQSVAGVLPAVAQVITVLLFPPKQHRATVGDGHGREDVPAKGQTSAFVYFL
TAVAISVAALLALATLVRRHRALLENSRLLPDGMEASVNSIQDAERASRKVATLWHLFVKLRWLALGVALTFAAT
MFFPVFTTKTLSVHPDAAPLFRPAAFIPLAFLCWNLGDLVGRVLAVLPLSLRHRPFYLFVLSVIRIGQLPLYLLC
NIGGRGASVPSDFFYLVIVQLLFGLTNGWLGSSFMMAAGEWVEPGEREAAGAFMGLCLVVGLALGSFLSFTIADI
*
Coding >Ophcf2|06552
ATGGAAGGCTCAAGAACCGCTTACCGGCGTCTGGGCACCGACATGGACGACGATGACGCCGGCTCCGTCGTCACC
GAAGGGCCGCCCTTCTCATGGCTCGAGTACGCCATCTTTGGCTTCCTCGGCGTCGCCATGCTCTGGGCCTGGAAC
ATGTTCCTCGCCGCCGCGCCCTACTTCTCGTCTCGGTTCGCAGCCGACGCCTGGATAGAAGCCAACTTCCAGTCC
GCCATCCTCGCATCCTCTACGCTCGTCAACCTCGGCACCCTTGTCGTTCTCACGAAGCTACAGCGCGAGGCCTCG
TACACGTTCCGCATCAATCTAGCTCTCGTCATCAACACTCTCGTCTTCGCCCTCCTCACCTGCTCGACCGCTCTC
TTCCTCGACGCCTCCCCCTCGTCCTATCTCGCCTTTCTTCTCCTCGTCGTCGCCGCCGCTTCTTGGGCGACCGGC
CTCAGTCAAAATGGTTGTTTTGCCTTTGCCGCCAGCTTCGGTCGGCCAGAGTACACGCAGGCGATCATGGCCGGC
CAGAGCGTCGCCGGCGTCCTCCCCGCCGTCGCCCAGGTCATCACCGTTCTACTCTTCCCGCCCAAGCAACACCGT
GCTACCGTCGGCGACGGCCATGGCCGTGAAGACGTACCTGCCAAGGGACAGACGTCGGCCTTTGTCTATTTCCTC
ACCGCCGTCGCCATCTCCGTCGCTGCCCTCTTGGCGCTTGCCACTCTCGTGCGGAGACACCGCGCCCTTCTCGAA
AACAGTCGGCTCTTGCCCGACGGCATGGAAGCCTCCGTCAACAGCATCCAAGACGCCGAGCGAGCCTCCCGCAAG
GTGGCGACGCTATGGCACCTCTTCGTCAAGCTCCGCTGGCTCGCGCTTGGCGTCGCACTCACATTTGCCGCCACC
ATGTTCTTCCCCGTCTTTACTACCAAGACGCTCTCCGTCCATCCAGACGCCGCTCCGCTCTTCCGCCCTGCCGCC
TTCATCCCGCTCGCCTTCCTGTGCTGGAACCTTGGCGACCTGGTCGGCAGGGTCCTCGCCGTCCTACCTTTATCG
CTGCGGCACCGACCCTTTTACCTCTTCGTTCTCTCCGTCATCCGCATCGGCCAGTTGCCGCTCTACCTGCTCTGC
AATATTGGCGGCCGGGGCGCCTCGGTCCCCAGCGACTTCTTCTATCTCGTCATCGTCCAGCTCTTGTTCGGCCTG
ACCAATGGCTGGCTGGGCTCGAGCTTCATGATGGCTGCCGGTGAATGGGTCGAGCCGGGGGAGCGTGAGGCCGCC
GGTGCCTTTATGGGCCTCTGTCTAGTCGTCGGCTTGGCCTTGGGCAGCTTCCTGAGCTTTACCATCGCCGACATC
TAA
Transcript >Ophcf2|06552
ATGGAAGGCTCAAGAACCGCTTACCGGCGTCTGGGCACCGACATGGACGACGATGACGCCGGCTCCGTCGTCACC
GAAGGGCCGCCCTTCTCATGGCTCGAGTACGCCATCTTTGGCTTCCTCGGCGTCGCCATGCTCTGGGCCTGGAAC
ATGTTCCTCGCCGCCGCGCCCTACTTCTCGTCTCGGTTCGCAGCCGACGCCTGGATAGAAGCCAACTTCCAGTCC
GCCATCCTCGCATCCTCTACGCTCGTCAACCTCGGCACCCTTGTCGTTCTCACGAAGCTACAGCGCGAGGCCTCG
TACACGTTCCGCATCAATCTAGCTCTCGTCATCAACACTCTCGTCTTCGCCCTCCTCACCTGCTCGACCGCTCTC
TTCCTCGACGCCTCCCCCTCGTCCTATCTCGCCTTTCTTCTCCTCGTCGTCGCCGCCGCTTCTTGGGCGACCGGC
CTCAGTCAAAATGGTTGTTTTGCCTTTGCCGCCAGCTTCGGTCGGCCAGAGTACACGCAGGCGATCATGGCCGGC
CAGAGCGTCGCCGGCGTCCTCCCCGCCGTCGCCCAGGTCATCACCGTTCTACTCTTCCCGCCCAAGCAACACCGT
GCTACCGTCGGCGACGGCCATGGCCGTGAAGACGTACCTGCCAAGGGACAGACGTCGGCCTTTGTCTATTTCCTC
ACCGCCGTCGCCATCTCCGTCGCTGCCCTCTTGGCGCTTGCCACTCTCGTGCGGAGACACCGCGCCCTTCTCGAA
AACAGTCGGCTCTTGCCCGACGGCATGGAAGCCTCCGTCAACAGCATCCAAGACGCCGAGCGAGCCTCCCGCAAG
GTGGCGACGCTATGGCACCTCTTCGTCAAGCTCCGCTGGCTCGCGCTTGGCGTCGCACTCACATTTGCCGCCACC
ATGTTCTTCCCCGTCTTTACTACCAAGACGCTCTCCGTCCATCCAGACGCCGCTCCGCTCTTCCGCCCTGCCGCC
TTCATCCCGCTCGCCTTCCTGTGCTGGAACCTTGGCGACCTGGTCGGCAGGGTCCTCGCCGTCCTACCTTTATCG
CTGCGGCACCGACCCTTTTACCTCTTCGTTCTCTCCGTCATCCGCATCGGCCAGTTGCCGCTCTACCTGCTCTGC
AATATTGGCGGCCGGGGCGCCTCGGTCCCCAGCGACTTCTTCTATCTCGTCATCGTCCAGCTCTTGTTCGGCCTG
ACCAATGGCTGGCTGGGCTCGAGCTTCATGATGGCTGCCGGTGAATGGGTCGAGCCGGGGGAGCGTGAGGCCGCC
GGTGCCTTTATGGGCCTCTGTCTAGTCGTCGGCTTGGCCTTGGGCAGCTTCCTGAGCTTTACCATCGCCGACATC
TAA
Gene >Ophcf2|06552
ATGGAAGGCTCAAGAACCGCTTACCGGCGTCTGGGCACCGACATGGACGACGATGACGCCGGCTCCGTCGTCACC
GAAGGGCCGCCCTTCTCATGGCTCGAGTACGCCATCTTTGGCTTCCTCGGCGTCGCCATGCTCTGGGCCTGGTTC
GTCTCTCCCTTCTCCTGATCAAAGAAGGCGGAGGGAGACCTCTTCTGACGTCGGCGTCACCAGGAACATGTTCCT
CGCCGCCGCGCCCTACTTCTCGTCTCGGTTCGCAGCCGACGCCTGGATAGAAGCCAACTTCCAGTCCGCCATCCT
CGCATCCTCTACGCTCGTCAACCTCGGCACCCTTGTCGTTCTCACGAAGCTACAGCGCGAGGCCTCGTACACGTT
CCGCATCAATCTAGCTCTCGTCATCAACACTCTCGTCTTCGCCCTCCTCACCTGCTCGACCGCTCTCTTCCTCGA
CGCCTCCCCCTCGTCCTATCTCGCCTTTCTTCTCCTCGTCGTCGCCGCCGCTTCTTGGGCGACCGGCCTCAGTCA
AAATGGTTGTTTTGCCTTTGCCGCCAGCTTCGGTCGGCCAGAGTACACGCAGGCGATCATGGCCGGCCAGAGCGT
CGCCGGCGTCCTCCCCGCCGTCGCCCAGGTCATCACCGTTCTACTCTTCCCGCCCAAGCAACACCGTGCTACCGT
CGGCGACGGCCATGGCCGTGAAGACGTACCTGCCAAGGGACAGACGTCGGCCTTTGTCTATTTCCTCACCGCCGT
CGCCATCTCCGTCGCTGCCCTCTTGGCGCTTGCCACTCTCGTGCGGAGACACCGCGCCCTTCTCGAAAACAGTCG
GCTCTTGCCCGACGGCATGGAAGCCTCCGTCAACAGCATCCAAGACGCCGAGCGAGCCTCCCGCAAGGTGGCGAC
GCTATGGCACCTCTTCGTCAAGCTCCGCTGGCTCGCGCTTGGCGTCGCACTCACATTTGCCGCCACCATGTTCTT
CCCCGTCTTTACTACCAAGACGCTCTCCGTCCATCCAGACGCCGCTCCGCTCTTCCGCCCTGCCGCCTTCATCCC
GCTCGCCTTCCTGTGCTGGAACCTTGGCGACCTGGTCGGCAGGGTCCTCGCCGTCCTACCTTTATCGCTGCGGCA
CCGACCCTTTTACCTCTTCGTTCTCTCCGTCATCCGCATCGGCCAGTTGCCGCTCTACCTGCTCTGCAATATTGG
CGGCCGGGGCGCCTCGGTCCCCAGCGACTTCTTCTATCTCGTCATCGTCCAGCTCTTGTTCGGCCTGACCAATGG
CTGGCTGGGCTCGAGCTTCATGATGGCTGCCGGTGAATGGGTCGAGCCGGGGGAGCGTGAGGCCGCCGGTGCCTT
TATGGGCCTCTGTCTAGTCGTCGGCTTGGCCTTGGGCAGCTTCCTGAGCTTTACCATCGCCGACATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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