Protein ID | Ophcf2|06529 |
Gene name | |
Location | scaffold_08:355866..357365 |
Strand | - |
Gene length (bp) | 1499 |
Transcript length (bp) | 1248 |
Coding sequence length (bp) | 1248 |
Protein length (aa) | 416 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03435 | Sacchrp_dh_NADP | Saccharopine dehydrogenase NADP binding domain | 2.6E-16 | 5 | 135 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016491 | oxidoreductase activity | Yes |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 288 | 307 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06529 MYDLVILGATGYTGLLTAEHVATNLPSSLKWALAGRSKAKLQTVADECKQLSPTMSTPELELVNVDDADQMDALV RKTSLVITTVGPYFRFGEAVVRACAQAGTHYVDCTGETPWVASMIKKYEGAARQSGAILVPCNGVESAATDLITW SLVSFVKEKLGVGVEDVVLSIHKSSIVPSGGTVATAMGVFDHYSLSDLMSNRKPYALSPVPHPERQRPVSSFLNT LLGIRHVPDLGLQATSLQAAVDAPVIERTWGLLQQTPSRKAQFYGPKFNWIAYQKPRNWLSGIAMHWVLAVGTVI IALVAPVRTLIKKLAHEPGQGLSKDGMAREELDYRGTAVPDDPSGAVKKRAYCRAQYRGSSYQATALFLAHAAQT MLEDKMELPGGFYTPACLGKGYVDRVNRAGFKIDVKMLDD* |
Coding | >Ophcf2|06529 ATGTACGATCTCGTCATCTTGGGAGCTACCGGCTATACTGGCCTCTTGACGGCCGAGCACGTCGCTACCAATCTC CCTTCCAGTCTCAAATGGGCTCTCGCAGGCCGCTCCAAGGCCAAGCTGCAGACCGTGGCGGACGAATGCAAGCAG TTGAGCCCTACCATGTCGACGCCTGAGCTGGAGCTGGTTAATGTGGATGACGCGGATCAGATGGACGCCCTCGTT CGCAAGACGTCGCTCGTCATCACCACGGTTGGCCCTTACTTTCGCTTCGGCGAGGCTGTGGTTCGGGCTTGTGCT CAGGCTGGCACTCACTATGTTGACTGCACCGGCGAGACCCCCTGGGTGGCGAGCATGATTAAGAAATACGAGGGA GCGGCGAGGCAGAGCGGTGCCATCTTGGTTCCCTGCAATGGCGTCGAGTCGGCTGCCACCGACCTCATCACCTGG AGCCTCGTGAGCTTCGTCAAGGAGAAGCTAGGCGTTGGAGTAGAGGACGTCGTTCTATCCATCCACAAGTCCAGC ATCGTCCCGTCCGGCGGCACCGTCGCCACGGCAATGGGCGTCTTCGACCACTACTCCCTCTCGGATCTCATGTCC AACAGAAAGCCCTACGCCCTCTCCCCCGTCCCGCACCCTGAAAGGCAGCGCCCCGTCTCGTCGTTCCTCAACACC CTCCTCGGCATCCGACACGTACCCGATCTCGGCCTCCAGGCGACGTCGCTACAGGCGGCCGTCGACGCGCCGGTG ATAGAGCGCACATGGGGCCTCCTTCAGCAGACCCCCTCGCGCAAGGCCCAGTTCTACGGCCCCAAATTCAACTGG ATCGCCTACCAGAAGCCGCGGAACTGGCTCTCCGGCATAGCCATGCACTGGGTCCTCGCCGTCGGCACCGTCATC ATCGCCCTCGTCGCCCCCGTCAGGACCCTCATCAAGAAGCTCGCCCACGAGCCTGGCCAGGGCCTCAGCAAGGAC GGCATGGCCAGAGAGGAGCTCGACTACCGCGGAACGGCCGTGCCGGATGATCCGTCGGGAGCCGTCAAGAAGCGA GCCTACTGTCGGGCTCAGTACCGCGGCAGCTCGTATCAAGCCACGGCTCTCTTCTTGGCGCACGCGGCTCAGACG ATGCTCGAGGATAAGATGGAGCTTCCAGGAGGCTTCTACACGCCGGCCTGCCTCGGCAAGGGCTACGTCGATCGC GTGAACCGCGCTGGCTTCAAGATCGATGTCAAGATGTTGGATGATTAG |
Transcript | >Ophcf2|06529 ATGTACGATCTCGTCATCTTGGGAGCTACCGGCTATACTGGCCTCTTGACGGCCGAGCACGTCGCTACCAATCTC CCTTCCAGTCTCAAATGGGCTCTCGCAGGCCGCTCCAAGGCCAAGCTGCAGACCGTGGCGGACGAATGCAAGCAG TTGAGCCCTACCATGTCGACGCCTGAGCTGGAGCTGGTTAATGTGGATGACGCGGATCAGATGGACGCCCTCGTT CGCAAGACGTCGCTCGTCATCACCACGGTTGGCCCTTACTTTCGCTTCGGCGAGGCTGTGGTTCGGGCTTGTGCT CAGGCTGGCACTCACTATGTTGACTGCACCGGCGAGACCCCCTGGGTGGCGAGCATGATTAAGAAATACGAGGGA GCGGCGAGGCAGAGCGGTGCCATCTTGGTTCCCTGCAATGGCGTCGAGTCGGCTGCCACCGACCTCATCACCTGG AGCCTCGTGAGCTTCGTCAAGGAGAAGCTAGGCGTTGGAGTAGAGGACGTCGTTCTATCCATCCACAAGTCCAGC ATCGTCCCGTCCGGCGGCACCGTCGCCACGGCAATGGGCGTCTTCGACCACTACTCCCTCTCGGATCTCATGTCC AACAGAAAGCCCTACGCCCTCTCCCCCGTCCCGCACCCTGAAAGGCAGCGCCCCGTCTCGTCGTTCCTCAACACC CTCCTCGGCATCCGACACGTACCCGATCTCGGCCTCCAGGCGACGTCGCTACAGGCGGCCGTCGACGCGCCGGTG ATAGAGCGCACATGGGGCCTCCTTCAGCAGACCCCCTCGCGCAAGGCCCAGTTCTACGGCCCCAAATTCAACTGG ATCGCCTACCAGAAGCCGCGGAACTGGCTCTCCGGCATAGCCATGCACTGGGTCCTCGCCGTCGGCACCGTCATC ATCGCCCTCGTCGCCCCCGTCAGGACCCTCATCAAGAAGCTCGCCCACGAGCCTGGCCAGGGCCTCAGCAAGGAC GGCATGGCCAGAGAGGAGCTCGACTACCGCGGAACGGCCGTGCCGGATGATCCGTCGGGAGCCGTCAAGAAGCGA GCCTACTGTCGGGCTCAGTACCGCGGCAGCTCGTATCAAGCCACGGCTCTCTTCTTGGCGCACGCGGCTCAGACG ATGCTCGAGGATAAGATGGAGCTTCCAGGAGGCTTCTACACGCCGGCCTGCCTCGGCAAGGGCTACGTCGATCGC GTGAACCGCGCTGGCTTCAAGATCGATGTCAAGATGTTGGATGATTAG |
Gene | >Ophcf2|06529 ATGTACGATCTCGTCATCTTGGGAGCTACCGGTGAGGAAACCGCGCGGTCGACACGAGTCTTCTCTTTACCGCTG GTGCTGATTCCATGACGCAGGCTATACTGGCCTCTTGACGGCCGAGCACGTCGCTACCAATCTCCCTTCCAGTCT CAAATGGGCTCTCGCAGGCCGCTCCAAGGCCAAGCTGCAGACCGTGGCGGACGAATGCAAGCAGTTGAGCCCTAC CATGTCGACGCCTGGTGTGTTCTCCCCTTCGCAACCTTGCTTATTTCGATCCGAGCGCTGAGCGTGTGAATGGTC AAAGAGCTGGAGCTGGTTAATGTGGATGACGCGGATCAGATGGACGCCCTCGTTCGCAAGACGTCGCTCGTCATC ACCACGGTTGGCCCTTACTTTCGCTTCGGCGAGGCTGTGGTTCGGGCTTGTGCTCAGGCTGGCACTCACTATGTT GACTGCACCGGCGAGACCCCCTGGGTGGCGAGCATGATTAAGAAATACGAGGGAGCGGCGAGGCAGAGCGGTGCC ATCTTGGTTCCCTGCAATGGCGTCGAGTCGGCTGCCACCGACCTCATCACCTGGAGCCTCGTGAGCTTCGTCAAG GAGAAGCTAGGCGTTGGAGTAGAGGACGTCGTTCTATCCATCCACAAGTCCAGGTCAGTCATCGTCTCCCCCATC CAGTCGACGCCAATATCACAACATCTCCTCTAACACCAGCATGGCAGCATCGTCCCGTCCGGCGGCACCGTCGCC ACGGCAATGGGCGTCTTCGACCACTACTCCCTCTCGGATCTCATGTCCAACAGAAAGCCCTACGCCCTCTCCCCC GTCCCGCACCCTGAAAGGCAGCGCCCCGTCTCGTCGTTCCTCAACACCCTCCTCGGCATCCGACACGTACCCGAT CTCGGCCTCCAGGCGACGTCGCTACAGGCGGCCGTCGACGCGCCGGTGATAGAGCGCACATGGGGCCTCCTTCAG CAGACCCCCTCGCGCAAGGCCCAGTTCTACGGCCCCAAATTCAACTGGATCGCCTACCAGAAGCCGCGGAACTGG CTCTCCGGCATAGCCATGCACTGGGTCCTCGCCGTCGGCACCGTCATCATCGCCCTCGTCGCCCCCGTCAGGACC CTCATCAAGAAGCTCGCCCACGAGCCTGGCCAGGGCCTCAGCAAGGACGGCATGGCCAGAGAGGAGCTCGACTAC CGCGGAACGGCCGTGCCGGATGATCCGTCGGGAGCCGTCAAGAAGCGAGCCTACTGTCGGGCTCAGTACCGCGGC AGCTCGTATCAAGGTGAGTCTCGCGACCCTATTATATCCCCTACGGGAAAGCTAACGATGGGAAAGCCACGGCTC TCTTCTTGGCGCACGCGGCTCAGACGATGCTCGAGGATAAGATGGAGCTTCCAGGAGGCTTCTACACGCCGGCCT GCCTCGGCAAGGGCTACGTCGATCGCGTGAACCGCGCTGGCTTCAAGATCGATGTCAAGATGTTGGATGATTAG |