Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06528
Gene name
Locationscaffold_08:353790..355352
Strand+
Gene length (bp)1562
Transcript length (bp)1404
Coding sequence length (bp)1404
Protein length (aa) 468

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02582 DUF155 RMND1/Sif2-Sif3/Mrx10, DUF155 5.3E-52 243 413

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 438 460 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06528
MERAASDENTPLLPASDGRPRNARTVTFSADPVTRTIEPDALPTSLNNKLRRRYSHGSAVPSSVVAKIGPQRSTK
KTEKLKLLPNPDLQEDEDEESGRDVYSQYTRIKDPTARRDAARLGKSDRARLPRVTAYCTANRYDMDGLMRFFKG
RGKTRGANPKLIDECIYTPYADAKPSSPRSPRQRRHSTGGDLYEADALGQSSPPLPQPPEADAYHDVVADDRLPT
VIEPAPELDVQVHTPEAFLFDYGVIVVWGMTEAHEARFLRDIAKFEVEKLAADDVETEHFNFYYTHEYQARIYND
FITLRDKHNYMTKLAISHALAQSVKTSLFEELIASTIDTCKDIPTQIALTGKIKLSRKQINMQIGELFILRINIH
LNGSVLDTPELFWVEPQLEPVYQAVRSYLEMDQRVELLTERLDVIADLLAVLKDQLSHGHDEMLEWIVIILIAME
ILVAAINIVVDVYAGEA*
Coding >Ophcf2|06528
ATGGAGCGTGCGGCCTCGGACGAGAATACGCCCCTACTGCCGGCCTCGGATGGCCGGCCCCGAAACGCGCGGACC
GTCACCTTCAGCGCCGATCCCGTGACGCGTACCATCGAGCCAGATGCCTTGCCGACGTCACTCAACAACAAGCTT
CGTCGGCGATACAGCCATGGCAGCGCTGTCCCTTCATCCGTCGTCGCAAAGATTGGGCCCCAGCGGAGCACGAAG
AAGACGGAGAAGCTCAAGTTGTTGCCCAACCCGGATCTTCAGGAGGATGAGGATGAGGAGAGCGGTCGCGATGTC
TACTCGCAGTATACCCGTATCAAGGATCCTACCGCCAGGAGAGACGCTGCTCGCCTCGGGAAGAGTGATCGTGCT
CGTCTGCCGCGCGTCACGGCTTATTGCACTGCAAACCGCTACGACATGGATGGCCTCATGCGCTTCTTCAAGGGC
CGCGGTAAGACGAGGGGCGCCAACCCCAAACTCATCGACGAGTGCATCTACACTCCATACGCCGACGCGAAGCCC
TCCAGTCCGCGCTCTCCCCGTCAACGGCGCCACTCGACGGGCGGCGATTTGTACGAAGCCGATGCTCTCGGTCAG
TCGTCACCACCGCTGCCGCAGCCGCCGGAAGCCGATGCCTATCACGACGTCGTTGCCGATGACCGTCTGCCGACC
GTCATTGAGCCGGCGCCTGAACTCGACGTTCAGGTCCATACGCCTGAGGCATTCCTCTTCGACTACGGCGTCATC
GTCGTCTGGGGCATGACTGAGGCTCACGAGGCTCGCTTCCTGAGGGATATTGCCAAGTTTGAGGTGGAGAAGCTG
GCGGCTGACGATGTCGAGACGGAGCATTTCAACTTTTACTACACGCACGAGTATCAGGCTCGCATCTACAACGAC
TTCATCACCCTCCGAGATAAGCACAACTACATGACCAAGCTGGCTATATCGCATGCCCTCGCCCAGAGCGTAAAG
ACATCCCTCTTCGAGGAGCTCATCGCTTCCACGATAGATACGTGCAAGGACATACCGACGCAGATCGCCCTCACC
GGAAAGATCAAACTCAGCAGGAAGCAGATCAACATGCAGATCGGCGAGCTCTTCATCCTACGCATCAACATCCAC
CTCAACGGCTCTGTTCTCGATACGCCGGAGCTCTTCTGGGTCGAGCCTCAGCTTGAACCCGTTTACCAGGCCGTC
CGCAGCTACCTCGAGATGGACCAGCGCGTCGAGCTGTTGACGGAGCGGCTTGACGTCATTGCCGACTTGCTGGCT
GTGTTGAAGGACCAGCTTAGCCACGGCCATGATGAGATGCTCGAGTGGATTGTCATCATCCTCATCGCCATGGAG
ATTCTCGTGGCCGCCATCAACATCGTCGTGGACGTTTACGCAGGCGAGGCATAG
Transcript >Ophcf2|06528
ATGGAGCGTGCGGCCTCGGACGAGAATACGCCCCTACTGCCGGCCTCGGATGGCCGGCCCCGAAACGCGCGGACC
GTCACCTTCAGCGCCGATCCCGTGACGCGTACCATCGAGCCAGATGCCTTGCCGACGTCACTCAACAACAAGCTT
CGTCGGCGATACAGCCATGGCAGCGCTGTCCCTTCATCCGTCGTCGCAAAGATTGGGCCCCAGCGGAGCACGAAG
AAGACGGAGAAGCTCAAGTTGTTGCCCAACCCGGATCTTCAGGAGGATGAGGATGAGGAGAGCGGTCGCGATGTC
TACTCGCAGTATACCCGTATCAAGGATCCTACCGCCAGGAGAGACGCTGCTCGCCTCGGGAAGAGTGATCGTGCT
CGTCTGCCGCGCGTCACGGCTTATTGCACTGCAAACCGCTACGACATGGATGGCCTCATGCGCTTCTTCAAGGGC
CGCGGTAAGACGAGGGGCGCCAACCCCAAACTCATCGACGAGTGCATCTACACTCCATACGCCGACGCGAAGCCC
TCCAGTCCGCGCTCTCCCCGTCAACGGCGCCACTCGACGGGCGGCGATTTGTACGAAGCCGATGCTCTCGGTCAG
TCGTCACCACCGCTGCCGCAGCCGCCGGAAGCCGATGCCTATCACGACGTCGTTGCCGATGACCGTCTGCCGACC
GTCATTGAGCCGGCGCCTGAACTCGACGTTCAGGTCCATACGCCTGAGGCATTCCTCTTCGACTACGGCGTCATC
GTCGTCTGGGGCATGACTGAGGCTCACGAGGCTCGCTTCCTGAGGGATATTGCCAAGTTTGAGGTGGAGAAGCTG
GCGGCTGACGATGTCGAGACGGAGCATTTCAACTTTTACTACACGCACGAGTATCAGGCTCGCATCTACAACGAC
TTCATCACCCTCCGAGATAAGCACAACTACATGACCAAGCTGGCTATATCGCATGCCCTCGCCCAGAGCGTAAAG
ACATCCCTCTTCGAGGAGCTCATCGCTTCCACGATAGATACGTGCAAGGACATACCGACGCAGATCGCCCTCACC
GGAAAGATCAAACTCAGCAGGAAGCAGATCAACATGCAGATCGGCGAGCTCTTCATCCTACGCATCAACATCCAC
CTCAACGGCTCTGTTCTCGATACGCCGGAGCTCTTCTGGGTCGAGCCTCAGCTTGAACCCGTTTACCAGGCCGTC
CGCAGCTACCTCGAGATGGACCAGCGCGTCGAGCTGTTGACGGAGCGGCTTGACGTCATTGCCGACTTGCTGGCT
GTGTTGAAGGACCAGCTTAGCCACGGCCATGATGAGATGCTCGAGTGGATTGTCATCATCCTCATCGCCATGGAG
ATTCTCGTGGCCGCCATCAACATCGTCGTGGACGTTTACGCAGGCGAGGCATAG
Gene >Ophcf2|06528
ATGGAGCGTGCGGCCTCGGACGAGAATACGCCCCTACTGCCGGCCTCGGATGGCCGGCCCCGAAACGCGCGGACC
GTCACCTTCAGCGCCGATCCCGTGACGCGTACCATCGAGCCAGATGCCTTGCCGACGTCACTCAACAACAAGCTT
CGTCGGCGATACAGCCATGGCAGCGCTGTCCCTTCATCCGTCGTCGCAAAGATTGGGCCCCAGCGGAGCACGAAG
AAGACGGAGAAGCTCAAGTTGTTGCCCAACCCGGATCTTCAGGAGGATGAGGATGAGGAGAGCGGTCGCGATGTC
TACTCGCAGTATACCCGTATCAAGGATCCTACCGCCAGGAGAGACGCTGCTCGCCTCGGGAAGAGTGATCGTGCT
CGTCTGCCGCGCGTCACGGCTTATTGCACTGCAAACCGCTACGACATGGATGGCCTCATGCGCTTCTTCAAGGGC
CGCGGTAAGACGAGGGGCGCCAACCCCAAACTCATCGACGAGTGCATCTACACTCCATACGCCGACGCGAAGCCC
TCCAGTCCGCGCTCTCCCCGTCAACGGCGCCACTCGACGGGCGGCGATTTGTACGAAGCCGATGCTCTCGGTCAG
TCGTCACCACCGCTGCCGCAGCCGCCGGAAGCCGATGCCTATCACGACGTCGTTGCCGATGACCGTCTGCCGACC
GTCATTGAGCCGGCGCCTGAACTCGACGTTCAGGTCCATACGCCTGAGGCATTCCTCTTCGACTACGGCGTCATC
GTCGTCTGGGGCATGACTGAGGCTCACGAGGCTCGCTTCCTGAGGGATATTGCCAAGTTTGAGGTGGAGAAGCTG
GCGGCTGACGATGTCGAGACGGAGCATTTCAACTTTTACTACACGCACGAGTATCAGGCTCGCATCTACAACGAC
TTCATCACCCTCCGAGATAAGCACAACTACATGACCAAGCTGGCTATATCGCATGCCCTCGCCCAGAGCGTAAAG
GTGATGACGGCTTCGTTCCTCTGGACCATGTCCCCTGGCTAACAATAAGGGAACCGTGCCCGAGAAATCAGACAT
CCCTCTTCGAGGAGCTCATCGCTTCCACGATAGATACGTGCAAGGACATACCGACGCAGATCGCCCTCACCGGAA
AGATCAAACTCAGCAGGAAGCAGATCAACATGCAGATCGGCGAGCTCTTCATCCTACGCATCAACATCCACCTCA
ACGGCTCTGTTCTCGATACGCCGGAGCTCTTCTGGGTCGAGCCTCAGCTTGAACCCGTTTACCAGGCCGTCCGCA
GCTACCTCGAGATGGACCAGCGCGTCGAGCTGTTGACGGAGCGGCTTGACGTCATTGCCGACTTGCTGGCTGTGT
TGAAGGACCAGCTTAGCCACGGCCATGATGAGATGCTCGAGTGGATTGGTGAGTCGGCTTTTACCTCTTCTTCTC
ATCATTGCTCCACGGCACAGCTGGCTATCCGGGTCGTCGTCGACTGACATGTTCGTCCAGTCATCATCCTCATCG
CCATGGAGATTCTCGTGGCCGCCATCAACATCGTCGTGGACGTTTACGCAGGCGAGGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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