Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06520
Gene name
Locationscaffold_08:332220..333534
Strand-
Gene length (bp)1314
Transcript length (bp)1314
Coding sequence length (bp)1314
Protein length (aa) 438

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 39 61 22
3 74 96 22
4 116 138 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06520
MSRAAWPVLGSTLALLATSTVLCLQINIVVNTTASPLRPATAVAGSLQFFVLAILWWLAVSRILHTGRATHPNLT
FGLGLFACALAAAVSAASLVYLRNAGAESEAVAQLQTRLLVATSVAVTFATGLQLASIISHFIASREPASLKREA
SEMPAEQPTRRLRRIKSIPYSQTKSSGDETAQEKMASPPLPPSPVVTTTPKGFVFTSPFARAVRSSSFKQKSTAP
KKQRRRASEDSDIRRTSLQGSSFDSWDTSSVDIHNRQVVLEMSTPSSAKQQSLETIPASPSHSRRSSVGSPTDPG
FPQSLRTSRSLSHGTLKHREEARPTPASSIHELHIHPLFRSDSQDPPPLASPGTSVVASPIAGQVITRRESSKSL
GGMLSGSTSGLHSPLAHQTCFESSEPTPDGSHASEEDSEGERPTTAPVPPWLLTQERDQSDE*
Coding >Ophcf2|06520
ATGTCTCGCGCCGCCTGGCCTGTCCTCGGCAGCACCTTGGCCCTGCTCGCAACGTCGACGGTCCTGTGTCTGCAG
ATCAACATCGTCGTCAACACCACGGCCTCTCCCCTGAGGCCCGCAACCGCCGTCGCCGGCTCTCTGCAGTTTTTC
GTCCTAGCCATCCTCTGGTGGCTCGCCGTGTCTCGCATCTTGCACACCGGCAGAGCGACACATCCCAACCTCACC
TTTGGCCTGGGCCTTTTCGCCTGCGCACTCGCCGCCGCCGTCTCCGCCGCGTCTTTGGTATACCTGCGCAACGCC
GGTGCCGAGTCGGAGGCCGTTGCCCAACTCCAGACCCGACTTCTGGTGGCCACCTCGGTCGCCGTGACGTTTGCC
ACTGGTCTCCAGCTCGCCTCCATCATCTCTCACTTCATCGCGTCTCGGGAGCCTGCCTCTCTTAAGCGAGAAGCT
TCCGAGATGCCGGCCGAACAACCCACAAGACGGCTGCGTCGCATCAAGTCGATCCCATACAGCCAGACCAAGAGT
AGCGGTGACGAGACGGCGCAGGAAAAAATGGCATCGCCTCCCCTGCCCCCGTCACCCGTCGTCACCACGACGCCC
AAGGGCTTCGTCTTCACTTCTCCCTTTGCCCGAGCCGTACGGTCGAGCTCATTCAAGCAAAAGTCGACAGCGCCC
AAGAAGCAGCGACGGCGGGCTTCCGAAGATTCAGACATCCGGAGGACAAGCCTCCAAGGGTCTTCGTTCGATTCG
TGGGATACGTCCTCGGTCGATATCCACAACCGACAGGTGGTGCTGGAGATGTCGACTCCTTCGTCAGCAAAGCAG
CAGAGCCTCGAGACTATTCCCGCCAGTCCGTCGCACAGCCGGAGGTCGAGCGTGGGGAGCCCAACTGACCCCGGC
TTTCCTCAGTCGTTGCGCACCAGCCGAAGCCTAAGCCATGGCACGCTGAAGCATCGAGAGGAAGCTCGACCTACG
CCCGCGAGCTCCATTCACGAGCTTCACATCCATCCGCTGTTTCGATCCGACTCGCAGGACCCACCACCGCTGGCA
TCGCCCGGGACCAGCGTCGTGGCGTCGCCCATCGCAGGGCAGGTCATCACGCGTCGCGAAAGCAGCAAATCTCTC
GGCGGGATGCTCAGTGGCAGTACATCGGGATTGCACAGCCCGCTAGCCCATCAAACTTGCTTCGAAAGCTCGGAG
CCGACGCCGGACGGCTCTCACGCGTCGGAAGAGGATAGCGAGGGGGAACGACCGACAACGGCTCCTGTGCCTCCG
TGGCTGCTGACTCAGGAGCGCGACCAGAGCGATGAGTGA
Transcript >Ophcf2|06520
ATGTCTCGCGCCGCCTGGCCTGTCCTCGGCAGCACCTTGGCCCTGCTCGCAACGTCGACGGTCCTGTGTCTGCAG
ATCAACATCGTCGTCAACACCACGGCCTCTCCCCTGAGGCCCGCAACCGCCGTCGCCGGCTCTCTGCAGTTTTTC
GTCCTAGCCATCCTCTGGTGGCTCGCCGTGTCTCGCATCTTGCACACCGGCAGAGCGACACATCCCAACCTCACC
TTTGGCCTGGGCCTTTTCGCCTGCGCACTCGCCGCCGCCGTCTCCGCCGCGTCTTTGGTATACCTGCGCAACGCC
GGTGCCGAGTCGGAGGCCGTTGCCCAACTCCAGACCCGACTTCTGGTGGCCACCTCGGTCGCCGTGACGTTTGCC
ACTGGTCTCCAGCTCGCCTCCATCATCTCTCACTTCATCGCGTCTCGGGAGCCTGCCTCTCTTAAGCGAGAAGCT
TCCGAGATGCCGGCCGAACAACCCACAAGACGGCTGCGTCGCATCAAGTCGATCCCATACAGCCAGACCAAGAGT
AGCGGTGACGAGACGGCGCAGGAAAAAATGGCATCGCCTCCCCTGCCCCCGTCACCCGTCGTCACCACGACGCCC
AAGGGCTTCGTCTTCACTTCTCCCTTTGCCCGAGCCGTACGGTCGAGCTCATTCAAGCAAAAGTCGACAGCGCCC
AAGAAGCAGCGACGGCGGGCTTCCGAAGATTCAGACATCCGGAGGACAAGCCTCCAAGGGTCTTCGTTCGATTCG
TGGGATACGTCCTCGGTCGATATCCACAACCGACAGGTGGTGCTGGAGATGTCGACTCCTTCGTCAGCAAAGCAG
CAGAGCCTCGAGACTATTCCCGCCAGTCCGTCGCACAGCCGGAGGTCGAGCGTGGGGAGCCCAACTGACCCCGGC
TTTCCTCAGTCGTTGCGCACCAGCCGAAGCCTAAGCCATGGCACGCTGAAGCATCGAGAGGAAGCTCGACCTACG
CCCGCGAGCTCCATTCACGAGCTTCACATCCATCCGCTGTTTCGATCCGACTCGCAGGACCCACCACCGCTGGCA
TCGCCCGGGACCAGCGTCGTGGCGTCGCCCATCGCAGGGCAGGTCATCACGCGTCGCGAAAGCAGCAAATCTCTC
GGCGGGATGCTCAGTGGCAGTACATCGGGATTGCACAGCCCGCTAGCCCATCAAACTTGCTTCGAAAGCTCGGAG
CCGACGCCGGACGGCTCTCACGCGTCGGAAGAGGATAGCGAGGGGGAACGACCGACAACGGCTCCTGTGCCTCCG
TGGCTGCTGACTCAGGAGCGCGACCAGAGCGATGAGTGA
Gene >Ophcf2|06520
ATGTCTCGCGCCGCCTGGCCTGTCCTCGGCAGCACCTTGGCCCTGCTCGCAACGTCGACGGTCCTGTGTCTGCAG
ATCAACATCGTCGTCAACACCACGGCCTCTCCCCTGAGGCCCGCAACCGCCGTCGCCGGCTCTCTGCAGTTTTTC
GTCCTAGCCATCCTCTGGTGGCTCGCCGTGTCTCGCATCTTGCACACCGGCAGAGCGACACATCCCAACCTCACC
TTTGGCCTGGGCCTTTTCGCCTGCGCACTCGCCGCCGCCGTCTCCGCCGCGTCTTTGGTATACCTGCGCAACGCC
GGTGCCGAGTCGGAGGCCGTTGCCCAACTCCAGACCCGACTTCTGGTGGCCACCTCGGTCGCCGTGACGTTTGCC
ACTGGTCTCCAGCTCGCCTCCATCATCTCTCACTTCATCGCGTCTCGGGAGCCTGCCTCTCTTAAGCGAGAAGCT
TCCGAGATGCCGGCCGAACAACCCACAAGACGGCTGCGTCGCATCAAGTCGATCCCATACAGCCAGACCAAGAGT
AGCGGTGACGAGACGGCGCAGGAAAAAATGGCATCGCCTCCCCTGCCCCCGTCACCCGTCGTCACCACGACGCCC
AAGGGCTTCGTCTTCACTTCTCCCTTTGCCCGAGCCGTACGGTCGAGCTCATTCAAGCAAAAGTCGACAGCGCCC
AAGAAGCAGCGACGGCGGGCTTCCGAAGATTCAGACATCCGGAGGACAAGCCTCCAAGGGTCTTCGTTCGATTCG
TGGGATACGTCCTCGGTCGATATCCACAACCGACAGGTGGTGCTGGAGATGTCGACTCCTTCGTCAGCAAAGCAG
CAGAGCCTCGAGACTATTCCCGCCAGTCCGTCGCACAGCCGGAGGTCGAGCGTGGGGAGCCCAACTGACCCCGGC
TTTCCTCAGTCGTTGCGCACCAGCCGAAGCCTAAGCCATGGCACGCTGAAGCATCGAGAGGAAGCTCGACCTACG
CCCGCGAGCTCCATTCACGAGCTTCACATCCATCCGCTGTTTCGATCCGACTCGCAGGACCCACCACCGCTGGCA
TCGCCCGGGACCAGCGTCGTGGCGTCGCCCATCGCAGGGCAGGTCATCACGCGTCGCGAAAGCAGCAAATCTCTC
GGCGGGATGCTCAGTGGCAGTACATCGGGATTGCACAGCCCGCTAGCCCATCAAACTTGCTTCGAAAGCTCGGAG
CCGACGCCGGACGGCTCTCACGCGTCGGAAGAGGATAGCGAGGGGGAACGACCGACAACGGCTCCTGTGCCTCCG
TGGCTGCTGACTCAGGAGCGCGACCAGAGCGATGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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