Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06496
Gene name
Locationscaffold_08:262997..263977
Strand+
Gene length (bp)980
Transcript length (bp)918
Coding sequence length (bp)918
Protein length (aa) 306

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10153 Efg1 rRNA-processing protein Efg1 2.8E-30 46 155

GO

GO Term Description Terminal node
GO:0006364 rRNA processing Yes
GO:0006725 cellular aromatic compound metabolic process No
GO:0044237 cellular metabolic process No
GO:0006396 RNA processing No
GO:0009987 cellular process No
GO:0008152 metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0034660 ncRNA metabolic process No
GO:0043170 macromolecule metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0016072 rRNA metabolic process No
GO:0034470 ncRNA processing No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.155 0.9371 0.0562 0.0075 0.202 0.0033 0.0177 0.0096 0.0088 0.0012

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup4062
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2325
Ophiocordyceps australis map64 (Brazil) OphauB2|7924
Ophiocordyceps camponoti-floridani Ophcf2|06496 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|4963
Ophiocordyceps kimflemingae Ophio5|5155
Ophiocordyceps subramaniannii Hirsu2|8192

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06496
MGTKRSFSEAEPHASYDKARDVQRKKHRGPAKYAHKPKDGPSGSSKRARSIARLLEHNQELPSHVRNELERELTT
LRTDIADKAFQKKRVIMISKYHKVRFFERRKASRLVKQLKRQMEQQPDDMDRLKRDLHVAEVDEAYTLYYPFMER
YVSLYAKSRTTQADEEDDDAVASAKLSLRAERPPMWSVVEQAVAEGPAACVRLRERRNAADEEKAKRPKPRQAAA
AKGRDGRKQPAGAKQEKDDDAKQVKADGAKKGKGDGEKQRMDAGSGKPQLNRKERRRLMREAVDKAEAEAEAEGG
FFEEL*
Coding >Ophcf2|06496
ATGGGCACCAAGAGATCCTTCTCCGAAGCAGAGCCGCACGCATCTTACGACAAGGCTCGTGACGTACAGCGGAAG
AAGCACCGCGGTCCGGCAAAGTACGCGCATAAGCCAAAGGATGGGCCCTCGGGATCGAGCAAACGCGCCCGCAGC
ATTGCGCGGCTGCTGGAGCACAATCAGGAGCTACCATCTCATGTTCGGAACGAACTAGAGCGAGAGCTCACTACA
TTGCGGACGGATATCGCCGACAAGGCTTTTCAGAAGAAGCGCGTCATCATGATCTCCAAGTATCACAAAGTGCGG
TTCTTTGAGCGAAGGAAGGCGTCGAGACTGGTAAAACAGCTCAAACGGCAAATGGAGCAGCAGCCCGATGACATG
GACCGCTTGAAGCGGGACCTGCACGTCGCCGAGGTGGACGAAGCCTACACACTCTACTATCCCTTCATGGAGCGG
TACGTCAGCCTATACGCCAAGTCGCGAACGACGCAGGCAGACGAGGAGGACGACGATGCGGTGGCGTCGGCCAAG
CTATCGCTGAGAGCCGAGAGGCCGCCCATGTGGTCTGTGGTGGAACAGGCGGTGGCGGAGGGTCCCGCTGCCTGT
GTGAGGCTGCGGGAAAGGCGCAATGCGGCCGATGAGGAGAAGGCGAAGCGCCCAAAGCCTCGCCAGGCGGCGGCG
GCAAAGGGCCGGGACGGACGGAAACAGCCTGCCGGCGCCAAGCAGGAGAAGGATGACGACGCGAAGCAAGTGAAG
GCTGACGGCGCAAAGAAAGGGAAAGGTGACGGGGAGAAGCAACGGATGGATGCCGGCTCGGGCAAGCCGCAGCTC
AACCGCAAGGAGAGGCGGCGTCTGATGCGCGAAGCCGTCGACAAGGCTGAGGCTGAGGCTGAGGCTGAGGGCGGC
TTCTTTGAGGAGCTGTGA
Transcript >Ophcf2|06496
ATGGGCACCAAGAGATCCTTCTCCGAAGCAGAGCCGCACGCATCTTACGACAAGGCTCGTGACGTACAGCGGAAG
AAGCACCGCGGTCCGGCAAAGTACGCGCATAAGCCAAAGGATGGGCCCTCGGGATCGAGCAAACGCGCCCGCAGC
ATTGCGCGGCTGCTGGAGCACAATCAGGAGCTACCATCTCATGTTCGGAACGAACTAGAGCGAGAGCTCACTACA
TTGCGGACGGATATCGCCGACAAGGCTTTTCAGAAGAAGCGCGTCATCATGATCTCCAAGTATCACAAAGTGCGG
TTCTTTGAGCGAAGGAAGGCGTCGAGACTGGTAAAACAGCTCAAACGGCAAATGGAGCAGCAGCCCGATGACATG
GACCGCTTGAAGCGGGACCTGCACGTCGCCGAGGTGGACGAAGCCTACACACTCTACTATCCCTTCATGGAGCGG
TACGTCAGCCTATACGCCAAGTCGCGAACGACGCAGGCAGACGAGGAGGACGACGATGCGGTGGCGTCGGCCAAG
CTATCGCTGAGAGCCGAGAGGCCGCCCATGTGGTCTGTGGTGGAACAGGCGGTGGCGGAGGGTCCCGCTGCCTGT
GTGAGGCTGCGGGAAAGGCGCAATGCGGCCGATGAGGAGAAGGCGAAGCGCCCAAAGCCTCGCCAGGCGGCGGCG
GCAAAGGGCCGGGACGGACGGAAACAGCCTGCCGGCGCCAAGCAGGAGAAGGATGACGACGCGAAGCAAGTGAAG
GCTGACGGCGCAAAGAAAGGGAAAGGTGACGGGGAGAAGCAACGGATGGATGCCGGCTCGGGCAAGCCGCAGCTC
AACCGCAAGGAGAGGCGGCGTCTGATGCGCGAAGCCGTCGACAAGGCTGAGGCTGAGGCTGAGGCTGAGGGCGGC
TTCTTTGAGGAGCTGTGA
Gene >Ophcf2|06496
ATGGGCACCAAGAGATCCTTCTCCGAAGCAGAGCCGCACGCATCTTACGACAAGGCTCGTGACGTACAGCGGAAG
AAGCACCGCGGTCCGGCAAAGTACGCGCATAAGCCAAAGGATGGGCCCTCGGGATCGAGCAAACGCGCCCGCAGC
ATTGCGCGGCTGCTGGAGCACAATCAGGAGCTACCATCTCATGTTCGGAACGAACTAGAGCGAGAGCTCACTACA
TTGCGGACGGATATCGCCGACAAGGCTTTTCAGAAGAAGCGCGTCATCATGATCTCCAAGTATCACAAAGTGCGG
TTCTTTGGTACGTTGACGGAGAACTACTCGCTTGCGCTACATACGGCTGCTGATATAGTGGCTTTGCAGAGCGAA
GGAAGGCGTCGAGACTGGTAAAACAGCTCAAACGGCAAATGGAGCAGCAGCCCGATGACATGGACCGCTTGAAGC
GGGACCTGCACGTCGCCGAGGTGGACGAAGCCTACACACTCTACTATCCCTTCATGGAGCGGTACGTCAGCCTAT
ACGCCAAGTCGCGAACGACGCAGGCAGACGAGGAGGACGACGATGCGGTGGCGTCGGCCAAGCTATCGCTGAGAG
CCGAGAGGCCGCCCATGTGGTCTGTGGTGGAACAGGCGGTGGCGGAGGGTCCCGCTGCCTGTGTGAGGCTGCGGG
AAAGGCGCAATGCGGCCGATGAGGAGAAGGCGAAGCGCCCAAAGCCTCGCCAGGCGGCGGCGGCAAAGGGCCGGG
ACGGACGGAAACAGCCTGCCGGCGCCAAGCAGGAGAAGGATGACGACGCGAAGCAAGTGAAGGCTGACGGCGCAA
AGAAAGGGAAAGGTGACGGGGAGAAGCAACGGATGGATGCCGGCTCGGGCAAGCCGCAGCTCAACCGCAAGGAGA
GGCGGCGTCTGATGCGCGAAGCCGTCGACAAGGCTGAGGCTGAGGCTGAGGCTGAGGGCGGCTTCTTTGAGGAGC
TGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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