Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06465
Gene name
Locationscaffold_08:152774..154967
Strand+
Gene length (bp)2193
Transcript length (bp)1998
Coding sequence length (bp)1998
Protein length (aa) 666

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04049 ANAPC8 Anaphase promoting complex subunit 8 / Cdc23 2.0E-52 11 181
PF13181 TPR_8 Tetratricopeptide repeat 1.5E-02 373 405
PF13181 TPR_8 Tetratricopeptide repeat 6.7E-05 407 437
PF13181 TPR_8 Tetratricopeptide repeat 3.4E-02 532 558
PF13414 TPR_11 TPR repeat 1.2E-06 413 452
PF13432 TPR_16 Tetratricopeptide repeat 6.2E-05 412 451

GO

GO Term Description Terminal node
GO:0005680 anaphase-promoting complex Yes
GO:0030071 regulation of mitotic metaphase/anaphase transition Yes
GO:0005515 protein binding Yes
GO:0000152 nuclear ubiquitin ligase complex No
GO:0032991 protein-containing complex No
GO:0010965 regulation of mitotic sister chromatid separation No
GO:0005488 binding No
GO:1905818 regulation of chromosome separation No
GO:0000151 ubiquitin ligase complex No
GO:0010564 regulation of cell cycle process No
GO:0050794 regulation of cellular process No
GO:1901990 regulation of mitotic cell cycle phase transition No
GO:0050789 regulation of biological process No
GO:1901987 regulation of cell cycle phase transition No
GO:1990234 transferase complex No
GO:0051983 regulation of chromosome segregation No
GO:1902494 catalytic complex No
GO:0033043 regulation of organelle organization No
GO:0007346 regulation of mitotic cell cycle No
GO:0033045 regulation of sister chromatid segregation No
GO:0005575 cellular_component No
GO:1902099 regulation of metaphase/anaphase transition of cell cycle No
GO:0003674 molecular_function No
GO:0140513 nuclear protein-containing complex No
GO:0031461 cullin-RING ubiquitin ligase complex No
GO:0051726 regulation of cell cycle No
GO:0065007 biological regulation No
GO:0140535 intracellular protein-containing complex No
GO:0008150 biological_process No
GO:0033044 regulation of chromosome organization No
GO:0051128 regulation of cellular component organization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06465
MAHSVLEVGHLRAALQDAVIQCSERCLYQSAKWAAELLNALPEADGTDQDTHSPDISASNQFPDEAAMEAREHHR
YLLAKSLFDCKEYDRCAAVFLPEPILSSVLAPRSDVPAASSSRRAKGKGKATASRRGPAVAFLPKLSQKSLFLAL
YAKLISGEKRKNEESEMVMGPQDLGTVVNKELLVIGRYLTAWFEERTVEDDEVVGSHGWLEYLYGMVLAKEKNDA
KAMEFLVRSVHKFPMNWGCWLEMTSLVSRVDELNRILKHCPQNIVSFIFHVHTSLELYQQSPSLANSLEQLLSIF
PNSAFLLTCSALLAYHAKDLIAAEQHFSRLVALHPHRLDSLDNYSNILYVLNMRPKLAFVAHLCSSVDKFRPESC
VVIGNYYSLLSMHDKAVQHFRRALTLDRSCLSAWTLMGHEYVELKNTHAAIESYRRAVDVNRRDYRAWYGLGQTY
EMLEMHTYSLWYYKKAAGLRPWDGKMWLAVGSCLHKMGRERDGIKALKRALLADAYYDSGSSFGSGGDLVGARGA
AGHMDPDILLQIAVMYDQLDEEDEAKAYMELCVAQEDGGSAAAADGAGESTMKHNESSAGSDDDPDRQDGQGEGT
GVTAATSKARMWLARYAMRTEDYTTANRLATELCHDGVEVEEAKALVREIRSILDSAGGVYGSAS*
Coding >Ophcf2|06465
ATGGCGCACAGTGTTCTCGAGGTCGGCCATCTCCGGGCGGCGCTACAGGATGCCGTCATCCAGTGCTCAGAGAGA
TGTCTCTACCAGTCGGCCAAATGGGCTGCGGAGCTTCTCAACGCCTTGCCCGAGGCAGACGGCACTGATCAGGAC
ACCCATAGTCCAGACATCTCAGCCTCGAACCAGTTCCCGGACGAGGCCGCTATGGAGGCACGAGAGCACCACCGA
TACCTGCTAGCAAAGTCCCTTTTTGATTGCAAAGAGTATGACCGCTGCGCCGCCGTCTTTCTTCCCGAACCCATC
CTCTCCTCAGTCCTCGCCCCGCGCTCCGATGTGCCCGCCGCGTCATCGTCTCGAAGAGCCAAGGGCAAAGGAAAG
GCGACGGCCTCAAGGCGCGGTCCGGCCGTAGCTTTTTTGCCAAAACTCAGCCAGAAAAGTCTCTTTCTTGCCCTA
TACGCCAAGCTCATCTCGGGTGAGAAGCGGAAGAACGAGGAGTCGGAAATGGTCATGGGCCCCCAAGACCTCGGC
ACCGTCGTCAACAAGGAATTGCTCGTCATCGGACGCTACCTGACGGCATGGTTCGAAGAACGGACGGTGGAAGAC
GACGAGGTCGTCGGCAGTCATGGCTGGCTCGAGTATCTATACGGCATGGTCTTGGCCAAGGAGAAGAACGACGCC
AAGGCCATGGAGTTTCTCGTCCGCAGCGTTCACAAGTTCCCCATGAATTGGGGCTGCTGGCTGGAGATGACGTCT
CTCGTCTCCCGAGTCGACGAGCTCAACCGCATCTTGAAGCATTGCCCGCAGAACATCGTCTCCTTCATATTCCAC
GTCCACACTTCTCTGGAGTTGTACCAGCAGTCCCCTAGCCTGGCCAACAGCCTCGAGCAGCTGCTTTCCATCTTT
CCAAATTCAGCTTTTCTCCTCACTTGCAGCGCCCTGTTGGCGTACCACGCCAAAGACTTGATAGCCGCCGAGCAG
CATTTCAGCCGGCTCGTCGCTCTCCACCCGCATCGACTAGACTCCCTCGACAACTACTCCAACATACTCTATGTT
CTAAACATGCGGCCCAAGTTGGCCTTTGTCGCCCACCTCTGCTCCAGCGTCGACAAGTTTCGACCCGAGTCTTGC
GTGGTGATAGGAAACTACTATTCCCTTCTTTCGATGCACGATAAGGCAGTGCAACACTTTCGGAGGGCATTGACA
TTGGACAGATCTTGCCTCTCGGCATGGACCTTGATGGGCCATGAATACGTCGAGCTCAAGAACACGCACGCTGCC
ATCGAGTCGTACCGGCGAGCCGTTGACGTTAACCGGCGTGACTATCGTGCCTGGTACGGCCTAGGCCAGACGTAC
GAGATGCTCGAGATGCACACCTATTCGCTGTGGTACTACAAGAAAGCGGCTGGCCTGCGGCCGTGGGACGGCAAG
ATGTGGCTGGCCGTAGGCTCGTGTCTGCACAAGATGGGCCGGGAACGGGACGGCATCAAGGCCCTCAAGCGAGCC
CTGTTGGCCGACGCCTATTACGACTCGGGGAGCAGCTTCGGCAGCGGAGGCGACCTCGTCGGCGCCCGGGGAGCT
GCCGGCCACATGGACCCGGACATCCTACTGCAGATCGCCGTTATGTACGACCAGCTGGACGAGGAGGACGAGGCC
AAGGCTTACATGGAGCTCTGTGTGGCCCAAGAGGATGGTGGGTCAGCGGCAGCGGCTGACGGCGCGGGCGAGTCG
ACGATGAAGCACAACGAATCTTCGGCCGGCTCCGACGACGATCCGGACCGGCAAGACGGTCAAGGCGAGGGCACG
GGCGTGACGGCCGCGACCAGCAAGGCGCGCATGTGGCTGGCCAGATACGCCATGCGCACGGAAGACTATACAACC
GCCAACCGGCTCGCCACGGAGCTGTGTCACGACGGAGTCGAGGTCGAGGAGGCCAAGGCCCTGGTGCGGGAGATC
AGATCCATCCTGGACTCCGCCGGGGGCGTCTACGGCTCTGCCAGCTAG
Transcript >Ophcf2|06465
ATGGCGCACAGTGTTCTCGAGGTCGGCCATCTCCGGGCGGCGCTACAGGATGCCGTCATCCAGTGCTCAGAGAGA
TGTCTCTACCAGTCGGCCAAATGGGCTGCGGAGCTTCTCAACGCCTTGCCCGAGGCAGACGGCACTGATCAGGAC
ACCCATAGTCCAGACATCTCAGCCTCGAACCAGTTCCCGGACGAGGCCGCTATGGAGGCACGAGAGCACCACCGA
TACCTGCTAGCAAAGTCCCTTTTTGATTGCAAAGAGTATGACCGCTGCGCCGCCGTCTTTCTTCCCGAACCCATC
CTCTCCTCAGTCCTCGCCCCGCGCTCCGATGTGCCCGCCGCGTCATCGTCTCGAAGAGCCAAGGGCAAAGGAAAG
GCGACGGCCTCAAGGCGCGGTCCGGCCGTAGCTTTTTTGCCAAAACTCAGCCAGAAAAGTCTCTTTCTTGCCCTA
TACGCCAAGCTCATCTCGGGTGAGAAGCGGAAGAACGAGGAGTCGGAAATGGTCATGGGCCCCCAAGACCTCGGC
ACCGTCGTCAACAAGGAATTGCTCGTCATCGGACGCTACCTGACGGCATGGTTCGAAGAACGGACGGTGGAAGAC
GACGAGGTCGTCGGCAGTCATGGCTGGCTCGAGTATCTATACGGCATGGTCTTGGCCAAGGAGAAGAACGACGCC
AAGGCCATGGAGTTTCTCGTCCGCAGCGTTCACAAGTTCCCCATGAATTGGGGCTGCTGGCTGGAGATGACGTCT
CTCGTCTCCCGAGTCGACGAGCTCAACCGCATCTTGAAGCATTGCCCGCAGAACATCGTCTCCTTCATATTCCAC
GTCCACACTTCTCTGGAGTTGTACCAGCAGTCCCCTAGCCTGGCCAACAGCCTCGAGCAGCTGCTTTCCATCTTT
CCAAATTCAGCTTTTCTCCTCACTTGCAGCGCCCTGTTGGCGTACCACGCCAAAGACTTGATAGCCGCCGAGCAG
CATTTCAGCCGGCTCGTCGCTCTCCACCCGCATCGACTAGACTCCCTCGACAACTACTCCAACATACTCTATGTT
CTAAACATGCGGCCCAAGTTGGCCTTTGTCGCCCACCTCTGCTCCAGCGTCGACAAGTTTCGACCCGAGTCTTGC
GTGGTGATAGGAAACTACTATTCCCTTCTTTCGATGCACGATAAGGCAGTGCAACACTTTCGGAGGGCATTGACA
TTGGACAGATCTTGCCTCTCGGCATGGACCTTGATGGGCCATGAATACGTCGAGCTCAAGAACACGCACGCTGCC
ATCGAGTCGTACCGGCGAGCCGTTGACGTTAACCGGCGTGACTATCGTGCCTGGTACGGCCTAGGCCAGACGTAC
GAGATGCTCGAGATGCACACCTATTCGCTGTGGTACTACAAGAAAGCGGCTGGCCTGCGGCCGTGGGACGGCAAG
ATGTGGCTGGCCGTAGGCTCGTGTCTGCACAAGATGGGCCGGGAACGGGACGGCATCAAGGCCCTCAAGCGAGCC
CTGTTGGCCGACGCCTATTACGACTCGGGGAGCAGCTTCGGCAGCGGAGGCGACCTCGTCGGCGCCCGGGGAGCT
GCCGGCCACATGGACCCGGACATCCTACTGCAGATCGCCGTTATGTACGACCAGCTGGACGAGGAGGACGAGGCC
AAGGCTTACATGGAGCTCTGTGTGGCCCAAGAGGATGGTGGGTCAGCGGCAGCGGCTGACGGCGCGGGCGAGTCG
ACGATGAAGCACAACGAATCTTCGGCCGGCTCCGACGACGATCCGGACCGGCAAGACGGTCAAGGCGAGGGCACG
GGCGTGACGGCCGCGACCAGCAAGGCGCGCATGTGGCTGGCCAGATACGCCATGCGCACGGAAGACTATACAACC
GCCAACCGGCTCGCCACGGAGCTGTGTCACGACGGAGTCGAGGTCGAGGAGGCCAAGGCCCTGGTGCGGGAGATC
AGATCCATCCTGGACTCCGCCGGGGGCGTCTACGGCTCTGCCAGCTAG
Gene >Ophcf2|06465
ATGGCGCACAGTGTTCTCGAGGTCGGCCATCTCCGGGCGGCGCTACAGGATGCCGTCATCCAGTGCTCAGAGAGA
TGTCTCTACCAGTCGGCCAAATGGTAGCCTCTTCCTGCTCGCTGCTCCTCGCCTCTGCCTGCTGACGGCCTCCGC
TGATGTTTTATTGCTGACAAAACACGCTGTAGGGCTGCGGAGCTTCTCAACGCCTTGCCCGAGGCAGACGGCACT
GATCAGGACACCCATAGTCCAGACATCTCAGCCTCGAACCAGTTCCCGGACGAGGCCGCTATGGAGGCACGAGAG
CACCACCGATACCTGCTAGCAAAGTCCCTTTTTGATTGCAAAGAGTATGACCGCTGCGCCGCCGTCTTTCTTCCC
GAACCCATCCTCTCCTCAGTCCTCGCCCCGCGCTCCGATGTGCCCGCCGCGTCATCGTCTCGAAGAGCCAAGGGC
AAAGGAAAGGCGACGGCCTCAAGGCGCGGTCCGGCCGTAGCTTTTTTGCCAAAACTCAGCCAGAAAAGTCTCTTT
CTTGCCCTATACGCCAAGCTCATCTCGGGTGAGAAGCGGAAGAACGAGGAGTCGGAAATGGTCATGGGCCCCCAA
GACCTCGGCACCGTCGTCAACAAGGAATTGCTCGTCATCGGACGCTACCTGACGGCATGGTTCGAAGAACGGACG
GTGGAAGACGACGAGGTCGTCGGCAGTCATGGCTGGCTCGAGTATCTGTACGTGCTCGCCACGCACTCTGGCGGC
TGGCGGCTGACATGTCTGGACGCAGATACGGCATGGTCTTGGCCAAGGAGAAGAACGACGCCAAGGCCATGGAGT
TTCTCGTCCGCAGCGTTCACAAGTTCCCCATGAATTGGGGCTGCTGGCTGGAGATGACGTCTCTCGTCTCCCGAG
TCGACGAGGTTAGTCCAGACCTGATTGGGATGCTCGGATGAACCACTGATGAGAGACCGACGGCAGCTCAACCGC
ATCTTGAAGCATTGCCCGCAGAACATCGTCTCCTTCATATTCCACGTCCACACTTCTCTGGAGTTGTACCAGCAG
TCCCCTAGCCTGGCCAACAGCCTCGAGCAGCTGCTTTCCATCTTTCCAAATTCAGCTTTTCTCCTCACTTGCAGC
GCCCTGTTGGCGTACCACGCCAAAGACTTGATAGCCGCCGAGCAGCATTTCAGCCGGCTCGTCGCTCTCCACCCG
CATCGACTAGACTCCCTCGACAACTACTCCAACATACTCTATGTTCTAAACATGCGGCCCAAGTTGGCCTTTGTC
GCCCACCTCTGCTCCAGCGTCGACAAGTTTCGACCCGAGTCTTGCGTGGTGATAGGAAACTACTATTCCCTTCTT
TCGATGCACGATAAGGCAGTGCAACACTTTCGGAGGGCATTGACATTGGACAGATCTTGCCTCTCGGCATGGACC
TTGATGGGCCATGAATACGTCGAGCTCAAGAACACGCACGCTGCCATCGAGTCGTACCGGCGAGCCGTTGACGTT
AACCGGCGTGACTATCGTGCCTGGTACGGCCTAGGCCAGACGTACGAGATGCTCGAGATGCACACCTATTCGCTG
TGGTACTACAAGAAAGCGGCTGGCCTGCGGCCGTGGGACGGCAAGATGTGGCTGGCCGTAGGCTCGTGTCTGCAC
AAGATGGGCCGGGAACGGGACGGCATCAAGGCCCTCAAGCGAGCCCTGTTGGCCGACGCCTATTACGACTCGGGG
AGCAGCTTCGGCAGCGGAGGCGACCTCGTCGGCGCCCGGGGAGCTGCCGGCCACATGGACCCGGACATCCTACTG
CAGATCGCCGTTATGTACGACCAGCTGGACGAGGAGGACGAGGCCAAGGCTTACATGGAGCTCTGTGTGGCCCAA
GAGGATGGTGGGTCAGCGGCAGCGGCTGACGGCGCGGGCGAGTCGACGATGAAGCACAACGAATCTTCGGCCGGC
TCCGACGACGATCCGGACCGGCAAGACGGTCAAGGCGAGGGCACGGGCGTGACGGCCGCGACCAGCAAGGCGCGC
ATGTGGCTGGCCAGATACGCCATGCGCACGGAAGACTATACAACCGCCAACCGGCTCGCCACGGAGCTGTGTCAC
GACGGAGTCGAGGTCGAGGAGGCCAAGGCCCTGGTGCGGGAGATCAGATCCATCCTGGACTCCGCCGGGGGCGTC
TACGGCTCTGCCAGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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