© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|06438 |
| Gene name | |
| Location | scaffold_07:2432646..2435218 |
| Strand | + |
| Gene length (bp) | 2572 |
| Transcript length (bp) | 2394 |
| Coding sequence length (bp) | 2394 |
| Protein length (aa) | 798 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 1.6E-170 | 101 | 750 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0042887 | amide transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 103 | 125 | 22 |
| 2 | 130 | 152 | 22 |
| 3 | 176 | 198 | 22 |
| 4 | 210 | 229 | 19 |
| 5 | 233 | 255 | 22 |
| 6 | 276 | 307 | 31 |
| 7 | 322 | 344 | 22 |
| 8 | 349 | 371 | 22 |
| 9 | 423 | 445 | 22 |
| 10 | 475 | 497 | 22 |
| 11 | 501 | 523 | 22 |
| 12 | 549 | 571 | 22 |
| 13 | 586 | 608 | 22 |
| 14 | 653 | 675 | 22 |
| 15 | 701 | 720 | 19 |
| 16 | 733 | 755 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|06438 MGLKDRFGVRAREMGGETSGAEIRPEVSADHNPDRELRRFRNQHKWDPFLDIDKLDNIDEALASGNADKEAAVDE SLIQEDSPYPEVRSSVPPHDIDMPVNTIRAWVIGGVLCTIVAACNILLNLRRTPISITSTVVQLVAYPIGVGWAR VMPDVSFTLFGHTLSLNPGPFNVKEHTLITMMTAAGSSISYSIDILLAQEIFYKQEFKWGFQILLMLSTQAMGFG IAGVARRFLVWPSSMVWPATLITCSVMYSLHDHRPSDPAETNGWRIGRYRFFLYVALATFAWEWFPLVIAPFLSL FMFATWIAPTNVIVNQIFGGQSGLGLLPISFDWSVITAFLLSPLQTPAFAIFNVFAGIMLTTIGAIGLAWAGPEY YRYLPLSANQNFDRFAKPYNTSRILTPDFVINETAYQAYSPILLGPTFSLSYGLSFATLISTITHVALFYGHDVW NRARDSKYEEPDVHLKLMRKYRECPEWWFMSIFAVSFAFGMIASQFWKTNLTWWAYIVCILIGVVLFIPIGMVQA ITNQQTGLNVITEMIIGYMMPGRPVAMMLFKSWGYMLSYNGLTYISDMKVGHYMKIPPRSMFAAQAFAVIWLSFV QISTYNFLRGNIEGICTPTQAQGLTCPNAKTFYNASVIWGVIGPRKVFGAGSIYAWTNWFWFIGFAVPLIQWFAA RRWPRSWVRYLVSPALFGAAGMMPPATLFYLFQWVIVGLLFNFFIRRRFFGWWTRYNYPLSGALDIGTALCTVVA GLGLGLSETQFPTWWGTTVAGNTLDANNTAVTKVFVEGQQPIGPSSW* |
| Coding | >Ophcf2|06438 ATGGGCCTCAAGGACCGCTTCGGCGTCCGGGCGAGGGAGATGGGCGGCGAAACGTCTGGCGCCGAGATCCGGCCT GAGGTCTCGGCCGACCATAACCCGGATCGCGAGCTGCGTCGCTTCAGAAATCAGCACAAGTGGGATCCCTTCCTC GACATCGACAAGCTTGACAACATCGACGAGGCTCTCGCTTCGGGCAATGCCGACAAGGAGGCGGCTGTCGACGAG TCTCTGATCCAGGAAGACTCGCCGTACCCGGAAGTGCGGTCGTCGGTCCCTCCTCATGACATTGACATGCCCGTT AACACGATCCGCGCCTGGGTCATCGGCGGTGTGCTCTGCACCATCGTGGCCGCCTGCAACATCCTGCTCAACCTG CGGCGGACGCCCATCTCCATCACCTCGACAGTGGTGCAGCTGGTGGCCTACCCCATCGGTGTTGGCTGGGCCCGC GTCATGCCCGACGTCTCCTTCACCCTCTTCGGTCACACGTTGTCCCTCAACCCCGGCCCCTTCAACGTCAAGGAG CACACGCTCATCACTATGATGACGGCCGCCGGCTCCAGCATTAGCTACTCCATCGACATCCTACTCGCCCAGGAA ATCTTCTACAAGCAAGAGTTCAAATGGGGCTTCCAGATCCTGCTCATGCTCTCCACCCAGGCCATGGGCTTCGGC ATCGCCGGTGTCGCCCGCCGCTTCCTTGTCTGGCCCTCGTCCATGGTCTGGCCCGCAACGCTCATCACCTGCTCC GTCATGTACTCGCTGCATGACCACCGGCCCTCGGACCCGGCAGAGACCAATGGCTGGCGCATTGGCCGCTACAGG TTCTTCCTCTACGTCGCCCTCGCCACCTTTGCCTGGGAATGGTTCCCCCTCGTCATCGCCCCCTTCTTGTCGCTC TTCATGTTCGCCACCTGGATCGCGCCCACAAACGTCATCGTCAACCAGATCTTCGGCGGACAATCGGGTCTCGGC CTGCTGCCCATCTCGTTCGATTGGTCCGTCATCACCGCCTTCCTGTTGTCGCCTCTGCAGACGCCCGCCTTTGCC ATCTTCAACGTCTTCGCCGGCATCATGCTCACCACCATCGGCGCCATTGGCCTCGCCTGGGCCGGGCCCGAGTAC TACCGCTACCTGCCGCTCAGCGCCAACCAGAACTTTGACCGCTTCGCCAAGCCCTACAACACCAGCCGCATCCTG ACGCCCGACTTCGTCATCAACGAGACGGCCTACCAGGCCTACTCACCCATCCTGCTGGGGCCGACCTTTTCCCTC TCGTACGGCTTGTCCTTTGCCACGCTCATCTCTACAATCACCCACGTCGCCCTCTTCTACGGTCACGACGTCTGG AACCGCGCGCGCGACTCCAAGTACGAGGAGCCAGATGTGCACCTCAAGCTGATGCGCAAGTACCGCGAGTGCCCC GAGTGGTGGTTCATGTCCATCTTCGCCGTTAGCTTCGCCTTTGGCATGATTGCCAGCCAGTTCTGGAAGACCAAC CTCACCTGGTGGGCCTACATCGTCTGCATCCTCATCGGCGTCGTCCTCTTCATCCCCATCGGCATGGTTCAGGCC ATCACAAACCAGCAGACGGGCCTCAACGTCATCACCGAGATGATTATTGGCTACATGATGCCTGGCCGCCCAGTC GCCATGATGCTCTTCAAGTCGTGGGGCTACATGCTGTCCTACAACGGCCTGACGTACATCTCCGACATGAAGGTC GGCCACTACATGAAGATTCCACCCCGGAGCATGTTCGCCGCCCAGGCCTTTGCCGTCATCTGGCTGTCCTTTGTC CAGATCTCCACCTACAACTTCTTGCGCGGCAACATCGAGGGCATCTGCACCCCGACGCAGGCCCAGGGCCTGACG TGCCCCAACGCCAAGACGTTTTACAACGCCAGCGTCATCTGGGGCGTCATCGGGCCCCGTAAGGTCTTCGGCGCC GGCAGCATCTACGCCTGGACCAACTGGTTCTGGTTCATCGGCTTCGCCGTGCCCCTCATCCAATGGTTCGCCGCC CGCCGCTGGCCCCGGTCCTGGGTCCGCTACCTCGTCTCGCCCGCCCTGTTCGGCGCCGCCGGCATGATGCCGCCC GCCACGCTCTTCTACCTGTTCCAGTGGGTCATTGTCGGCCTCCTATTTAACTTTTTCATCCGCAGACGCTTCTTC GGCTGGTGGACTCGCTACAACTACCCCCTCTCCGGCGCCCTCGACATCGGCACCGCCCTGTGTACCGTCGTCGCC GGCCTCGGCTTGGGTCTCAGCGAGACGCAGTTCCCAACGTGGTGGGGGACCACCGTCGCCGGCAACACTCTCGAC GCCAACAACACGGCCGTCACAAAGGTCTTTGTGGAGGGGCAGCAGCCCATCGGGCCGTCGAGCTGGTAG |
| Transcript | >Ophcf2|06438 ATGGGCCTCAAGGACCGCTTCGGCGTCCGGGCGAGGGAGATGGGCGGCGAAACGTCTGGCGCCGAGATCCGGCCT GAGGTCTCGGCCGACCATAACCCGGATCGCGAGCTGCGTCGCTTCAGAAATCAGCACAAGTGGGATCCCTTCCTC GACATCGACAAGCTTGACAACATCGACGAGGCTCTCGCTTCGGGCAATGCCGACAAGGAGGCGGCTGTCGACGAG TCTCTGATCCAGGAAGACTCGCCGTACCCGGAAGTGCGGTCGTCGGTCCCTCCTCATGACATTGACATGCCCGTT AACACGATCCGCGCCTGGGTCATCGGCGGTGTGCTCTGCACCATCGTGGCCGCCTGCAACATCCTGCTCAACCTG CGGCGGACGCCCATCTCCATCACCTCGACAGTGGTGCAGCTGGTGGCCTACCCCATCGGTGTTGGCTGGGCCCGC GTCATGCCCGACGTCTCCTTCACCCTCTTCGGTCACACGTTGTCCCTCAACCCCGGCCCCTTCAACGTCAAGGAG CACACGCTCATCACTATGATGACGGCCGCCGGCTCCAGCATTAGCTACTCCATCGACATCCTACTCGCCCAGGAA ATCTTCTACAAGCAAGAGTTCAAATGGGGCTTCCAGATCCTGCTCATGCTCTCCACCCAGGCCATGGGCTTCGGC ATCGCCGGTGTCGCCCGCCGCTTCCTTGTCTGGCCCTCGTCCATGGTCTGGCCCGCAACGCTCATCACCTGCTCC GTCATGTACTCGCTGCATGACCACCGGCCCTCGGACCCGGCAGAGACCAATGGCTGGCGCATTGGCCGCTACAGG TTCTTCCTCTACGTCGCCCTCGCCACCTTTGCCTGGGAATGGTTCCCCCTCGTCATCGCCCCCTTCTTGTCGCTC TTCATGTTCGCCACCTGGATCGCGCCCACAAACGTCATCGTCAACCAGATCTTCGGCGGACAATCGGGTCTCGGC CTGCTGCCCATCTCGTTCGATTGGTCCGTCATCACCGCCTTCCTGTTGTCGCCTCTGCAGACGCCCGCCTTTGCC ATCTTCAACGTCTTCGCCGGCATCATGCTCACCACCATCGGCGCCATTGGCCTCGCCTGGGCCGGGCCCGAGTAC TACCGCTACCTGCCGCTCAGCGCCAACCAGAACTTTGACCGCTTCGCCAAGCCCTACAACACCAGCCGCATCCTG ACGCCCGACTTCGTCATCAACGAGACGGCCTACCAGGCCTACTCACCCATCCTGCTGGGGCCGACCTTTTCCCTC TCGTACGGCTTGTCCTTTGCCACGCTCATCTCTACAATCACCCACGTCGCCCTCTTCTACGGTCACGACGTCTGG AACCGCGCGCGCGACTCCAAGTACGAGGAGCCAGATGTGCACCTCAAGCTGATGCGCAAGTACCGCGAGTGCCCC GAGTGGTGGTTCATGTCCATCTTCGCCGTTAGCTTCGCCTTTGGCATGATTGCCAGCCAGTTCTGGAAGACCAAC CTCACCTGGTGGGCCTACATCGTCTGCATCCTCATCGGCGTCGTCCTCTTCATCCCCATCGGCATGGTTCAGGCC ATCACAAACCAGCAGACGGGCCTCAACGTCATCACCGAGATGATTATTGGCTACATGATGCCTGGCCGCCCAGTC GCCATGATGCTCTTCAAGTCGTGGGGCTACATGCTGTCCTACAACGGCCTGACGTACATCTCCGACATGAAGGTC GGCCACTACATGAAGATTCCACCCCGGAGCATGTTCGCCGCCCAGGCCTTTGCCGTCATCTGGCTGTCCTTTGTC CAGATCTCCACCTACAACTTCTTGCGCGGCAACATCGAGGGCATCTGCACCCCGACGCAGGCCCAGGGCCTGACG TGCCCCAACGCCAAGACGTTTTACAACGCCAGCGTCATCTGGGGCGTCATCGGGCCCCGTAAGGTCTTCGGCGCC GGCAGCATCTACGCCTGGACCAACTGGTTCTGGTTCATCGGCTTCGCCGTGCCCCTCATCCAATGGTTCGCCGCC CGCCGCTGGCCCCGGTCCTGGGTCCGCTACCTCGTCTCGCCCGCCCTGTTCGGCGCCGCCGGCATGATGCCGCCC GCCACGCTCTTCTACCTGTTCCAGTGGGTCATTGTCGGCCTCCTATTTAACTTTTTCATCCGCAGACGCTTCTTC GGCTGGTGGACTCGCTACAACTACCCCCTCTCCGGCGCCCTCGACATCGGCACCGCCCTGTGTACCGTCGTCGCC GGCCTCGGCTTGGGTCTCAGCGAGACGCAGTTCCCAACGTGGTGGGGGACCACCGTCGCCGGCAACACTCTCGAC GCCAACAACACGGCCGTCACAAAGGTCTTTGTGGAGGGGCAGCAGCCCATCGGGCCGTCGAGCTGGTAG |
| Gene | >Ophcf2|06438 ATGGGCCTCAAGGACCGCTTCGGCGTCCGGGCGAGGGAGATGGGCGGCGAAACGTCTGGCGCCGAGATCCGGCCT GAGGTCTCGGCCGACCATAACCCGGATCGCGAGCTGCGTCGCTTCAGAAATCAGCACAAGTGGGATCCCTTCCTC GACATCGACAAGCTTGACAACATCGACGAGGCTCTCGCTTCGGGCAATGCCGACAAGGAGGCGGCTGTCGACGAG TCTCTGATCCAGGAAGACTCGCCGTACCCGGAAGTGCGGTCGTCGGTGAGTCTGCTGGATAGAGCTGGGTATCTT CAAGTTAGCTGACGGCTCAGGTCCCTCCTCATGACATTGACATGCCCGTTAACACGATCCGCGCCTGGGTCATCG GCGGTGTGCTCTGCACCATCGTGGCCGCCTGCAACATCCTGCTCAACCTGCGGCGGACGCCCATCTCCATCACCT CGACAGTGGTGCAGCTGGTGGCCTACCCGTGAGATCTCTTGACCTCCCTGGCATGCCTATCCTCTCGTCTGACTT GTCCAGCATCGGTGTTGGCTGGGCCCGCGTCATGCCCGACGTCTCCTTCACCCTCTTCGGTCACACGTTGTCCCT CAACCCCGGCCCCTTCAACGTCAAGGAGCACACGCTCATCACTATGATGACGGCCGCCGGCTCCAGCATTAGCTA CTCCATCGACATCCTACTCGCCCAGGAAATCTTCTACAAGCAAGAGTTCAAATGGGGCTTCCAGATCCTGCTCAT GCTCTCCACCCAGGCCATGGGCTTCGGCATCGCCGGTGTCGCCCGCCGCTTCCTTGTCTGGCCCTCGTCCATGGT CTGGCCCGCAACGCTCATCACCTGCTCCGTCATGTACTCGCTGCATGACCACCGGCCCTCGGACCCGGCAGAGAC CAATGGCTGGCGCATTGGCCGCTACAGGTTCTTCCTCTACGTCGCCCTCGCCACCTTTGCCTGGGAATGGTTCCC CCTCGTCATCGCCCCCTTCTTGTCGCTCTTCATGTTCGCCACCTGGATCGCGCCCACAAACGTCATCGTCAACCA GATCTTCGGCGGACAATCGGGTCTCGGCCTGCTGCCCATCTCGTTCGATTGGTCCGTCATCACCGCCTTCCTGTT GTCGCCTCTGCAGACGCCCGCCTTTGCCATCTTCAACGTCTTCGCCGGCATCATGCTCACCACCATCGGCGCCAT TGGCCTCGCCTGGGCCGGGCCCGAGTACTACCGCTACCTGCCGCTCAGCGCCAACCAGAACTTTGACCGCTTCGC CAAGCCCTACAACACCAGCCGCATCCTGACGCCCGACTTCGTCATCAACGAGACGGCCTACCAGGCCTACTCACC CATCCTGCTGGGGCCGACCTTTTCCCTCTCGTACGGCTTGTCCTTTGCCACGCTCATCTCTACAATCACCCACGT CGCCCTCTTCTACGGTCACGACGTCTGGAACCGCGCGCGCGACTCCAAGTACGAGGAGCCAGATGTGCACCTCAA GCTGATGCGCAAGTACCGCGAGTGCCCCGAGTGGTGGTTCATGTCCATCTTCGCCGTTAGCTTCGCCTTTGGCAT GATTGCCAGCCAGTTCTGGAAGACCAACCTCACCTGGTGGGCCTACATCGTCTGCATCCTCATCGGCGTCGTCCT CTTCATCCCCATCGGCATGGTTCAGGCCATCACAAACCAGCAGACGGGCCTCAACGTCATCACCGAGATGATTAT TGGCTACATGATGCCTGGCCGCCCAGTCGCCATGATGCTCTTCAAGTCGTGGGGCTACATGCTGTCCTACAACGG CCTGACGTACATCTCCGACATGAAGGTCGGCCACTACATGAAGATTCCACCCCGGAGCATGTTCGCCGCCCAGGC CTTTGCCGTCATCTGGCTGTCCTTTGTCCAGATCTCCACCTACAACTTCTTGCGCGGCAACATCGAGGGCATCTG CACCCCGACGCAGGCCCAGGGCCTGACGTGCCCCAACGCCAAGACGTTTTACAACGCCAGCGTCATCTGGGGCGT CATCGGGCCCCGTAAGGTCTTCGGCGCCGGCAGCATCTACGCCTGGACCAACTGGTTCTGGTTCATCGGCTTCGC CGTGCCCCTCATCCAATGGTTCGCCGCCCGCCGCTGGCCCCGGTCCTGGGTCCGCTACCTCGTCTCGCCCGCCCT GTTCGGCGCCGCCGGCATGATGCCGCCCGCCACGCTCTTCTACCTGTTCCAGTGGGTCATTGTCGGCCTCCTATT TAACTTTTTCATCCGCAGACGCTTCTTCGGCTGGTGGAGTAAGCTGCTTCTTCTCCCTTTCTCCTTTACTCTGAT GTCGTTGTTTCTGTTTTTTTCTGACGCTTTTCCTTTAGCTCGCTACAACTACCCCCTCTCCGGCGCCCTCGACAT CGGCACCGCCCTGTGTACCGTCGTCGCCGGCCTCGGCTTGGGTCTCAGCGAGACGCAGTTCCCAACGTGGTGGGG GACCACCGTCGCCGGCAACACTCTCGACGCCAACAACACGGCCGTCACAAAGGTCTTTGTGGAGGGGCAGCAGCC CATCGGGCCGTCGAGCTGGTAG |