Protein ID | Ophcf2|06420 |
Gene name | |
Location | scaffold_07:2323366..2324903 |
Strand | + |
Gene length (bp) | 1537 |
Transcript length (bp) | 1473 |
Coding sequence length (bp) | 1473 |
Protein length (aa) | 491 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01565 | FAD_binding_4 | FAD binding domain | 6.0E-24 | 53 | 188 |
GO Term | Description | Terminal node |
---|---|---|
GO:0050660 | flavin adenine dinucleotide binding | Yes |
GO:0016491 | oxidoreductase activity | Yes |
GO:0000166 | nucleotide binding | No |
GO:0043168 | anion binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0003824 | catalytic activity | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0043167 | ion binding | No |
GO:0003674 | molecular_function | No |
GO:0036094 | small molecule binding | No |
GO:0005488 | binding | No |
GO:0097159 | organic cyclic compound binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1611 | 0.0584 | 0.8901 | 0.1248 | 0.0886 | 0.0862 | 0.3506 | 0.4623 | 0.2054 | 0.0342 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999739 |
CAZyme category | E-value | Start | End |
---|---|---|---|
AA7 | 1.7E-59 | 43 | 246 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 25 | Decorating |
Orthofinder run ID | 4 |
Orthogroup | 23 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06420 MATVCVAILLALMTTASVLSADPVMPGTVSLPDSPEYRTANTYWSTRQSRVHPRCFVAPTSTSQVSETIRILSSL RTPFSVKSGGHAAFENGSNTPNGITIDLVNLNDIIVSPGRQTVSIGPGNRWINVSRALDPHGLAVVGGRAADVGV SGLILGGGISYFSGSRGWACDNVRNYEVVVSSGRIVQASPSVNPDLYWALRGGGGSNFGIVTRFDVEAFPQGDLW TSSISFPASLNQTVVSLFQELSSRGFEQDPLAHFYFVMTYESRSDDFLILTSFFHPDPPADGAIPPVFLPFHSTP GGTPLANGTRRASVSALSMAIDQPSGSRQTWWDTSVDVSSAKLFQDIVSLFEAFVKDFAVRAANTELTPYLIFQP ISPSVINAMQKNGGNALGLIPEDGPLMIVQLAVSWSDEQLDSYVEKSSAALIEQIDELSRQGSLFRGFRYMNYAG RDQNVFASYGNRSLGRLKAIAERWDPDGVFRDLWKGYFKL* |
Coding | >Ophcf2|06420 ATGGCCACCGTCTGTGTAGCCATCTTGCTGGCTCTGATGACGACGGCTTCCGTCCTTTCTGCAGACCCTGTCATG CCGGGGACGGTCAGCCTGCCAGACTCGCCAGAGTATCGGACGGCAAACACTTACTGGTCTACACGACAATCACGG GTCCATCCGCGGTGCTTCGTAGCTCCAACGTCCACTAGCCAAGTCTCTGAGACTATCCGGATCCTCTCTTCGCTA CGGACGCCCTTTTCCGTCAAGTCCGGCGGACATGCTGCCTTTGAAAACGGCTCTAACACCCCAAACGGCATCACC ATAGATCTAGTCAACCTCAACGACATCATTGTCTCTCCCGGTCGCCAAACCGTCTCCATCGGCCCGGGCAACAGA TGGATCAACGTCTCCCGCGCCCTAGACCCTCATGGTTTGGCCGTGGTCGGCGGCAGGGCTGCCGATGTTGGTGTG AGCGGTCTCATCCTCGGAGGCGGCATCTCCTACTTCTCCGGGAGCCGCGGATGGGCCTGTGACAACGTCCGCAAC TACGAGGTCGTCGTTTCTTCTGGCAGAATCGTCCAAGCCTCGCCTTCTGTCAATCCTGATCTGTATTGGGCTCTT CGCGGTGGCGGCGGCTCGAATTTCGGCATCGTTACTCGTTTCGACGTCGAGGCGTTCCCCCAAGGCGATTTATGG ACGAGCTCAATCAGCTTTCCTGCTTCGCTTAACCAGACGGTCGTCTCGCTGTTTCAAGAACTGAGCAGTAGAGGT TTCGAGCAAGATCCTTTGGCTCATTTCTACTTCGTCATGACGTATGAGAGCCGTTCTGACGATTTCTTGATCCTT ACCAGCTTCTTCCATCCAGACCCTCCCGCAGATGGCGCCATACCCCCTGTATTTCTCCCTTTTCACTCGACTCCA GGCGGTACGCCGCTGGCCAATGGCACTCGTCGAGCAAGTGTCTCGGCTCTGTCCATGGCCATTGACCAACCGTCT GGCTCTCGTCAGACATGGTGGGACACGTCCGTCGACGTCTCCTCGGCCAAACTCTTCCAAGACATTGTGTCTCTT TTCGAAGCTTTCGTCAAGGATTTTGCTGTTCGCGCGGCGAATACAGAGCTCACACCCTACCTGATATTCCAGCCG ATATCTCCGAGCGTCATCAACGCCATGCAGAAGAACGGCGGGAATGCACTCGGTCTCATACCCGAGGACGGGCCG CTCATGATTGTGCAATTAGCCGTGTCCTGGAGCGACGAACAGCTGGATTCCTACGTCGAGAAGTCTTCGGCAGCT TTGATCGAGCAGATTGACGAGCTCTCGAGACAGGGGAGTCTGTTCCGCGGTTTTCGCTACATGAATTACGCTGGT CGAGATCAAAATGTCTTTGCGAGCTATGGGAACCGGAGTCTTGGTCGATTAAAGGCGATTGCTGAGCGCTGGGAT CCGGACGGTGTGTTTCGAGACTTGTGGAAGGGTTACTTTAAGCTGTGA |
Transcript | >Ophcf2|06420 ATGGCCACCGTCTGTGTAGCCATCTTGCTGGCTCTGATGACGACGGCTTCCGTCCTTTCTGCAGACCCTGTCATG CCGGGGACGGTCAGCCTGCCAGACTCGCCAGAGTATCGGACGGCAAACACTTACTGGTCTACACGACAATCACGG GTCCATCCGCGGTGCTTCGTAGCTCCAACGTCCACTAGCCAAGTCTCTGAGACTATCCGGATCCTCTCTTCGCTA CGGACGCCCTTTTCCGTCAAGTCCGGCGGACATGCTGCCTTTGAAAACGGCTCTAACACCCCAAACGGCATCACC ATAGATCTAGTCAACCTCAACGACATCATTGTCTCTCCCGGTCGCCAAACCGTCTCCATCGGCCCGGGCAACAGA TGGATCAACGTCTCCCGCGCCCTAGACCCTCATGGTTTGGCCGTGGTCGGCGGCAGGGCTGCCGATGTTGGTGTG AGCGGTCTCATCCTCGGAGGCGGCATCTCCTACTTCTCCGGGAGCCGCGGATGGGCCTGTGACAACGTCCGCAAC TACGAGGTCGTCGTTTCTTCTGGCAGAATCGTCCAAGCCTCGCCTTCTGTCAATCCTGATCTGTATTGGGCTCTT CGCGGTGGCGGCGGCTCGAATTTCGGCATCGTTACTCGTTTCGACGTCGAGGCGTTCCCCCAAGGCGATTTATGG ACGAGCTCAATCAGCTTTCCTGCTTCGCTTAACCAGACGGTCGTCTCGCTGTTTCAAGAACTGAGCAGTAGAGGT TTCGAGCAAGATCCTTTGGCTCATTTCTACTTCGTCATGACGTATGAGAGCCGTTCTGACGATTTCTTGATCCTT ACCAGCTTCTTCCATCCAGACCCTCCCGCAGATGGCGCCATACCCCCTGTATTTCTCCCTTTTCACTCGACTCCA GGCGGTACGCCGCTGGCCAATGGCACTCGTCGAGCAAGTGTCTCGGCTCTGTCCATGGCCATTGACCAACCGTCT GGCTCTCGTCAGACATGGTGGGACACGTCCGTCGACGTCTCCTCGGCCAAACTCTTCCAAGACATTGTGTCTCTT TTCGAAGCTTTCGTCAAGGATTTTGCTGTTCGCGCGGCGAATACAGAGCTCACACCCTACCTGATATTCCAGCCG ATATCTCCGAGCGTCATCAACGCCATGCAGAAGAACGGCGGGAATGCACTCGGTCTCATACCCGAGGACGGGCCG CTCATGATTGTGCAATTAGCCGTGTCCTGGAGCGACGAACAGCTGGATTCCTACGTCGAGAAGTCTTCGGCAGCT TTGATCGAGCAGATTGACGAGCTCTCGAGACAGGGGAGTCTGTTCCGCGGTTTTCGCTACATGAATTACGCTGGT CGAGATCAAAATGTCTTTGCGAGCTATGGGAACCGGAGTCTTGGTCGATTAAAGGCGATTGCTGAGCGCTGGGAT CCGGACGGTGTGTTTCGAGACTTGTGGAAGGGTTACTTTAAGCTGTGA |
Gene | >Ophcf2|06420 ATGGCCACCGTCTGTGTAGCCATCTTGCTGGCTCTGATGACGACGGCTTCCGTCCTTTCTGCAGACCCTGTACGA GGAGCCCCTGATGGATCCCCAGTCCGGGCTGACCTCGCAGTGTCTTGTCCTGTCGCAGGTCATGCCGGGGACGGT CAGCCTGCCAGACTCGCCAGAGTATCGGACGGCAAACACTTACTGGTCTACACGACAATCACGGGTCCATCCGCG GTGCTTCGTAGCTCCAACGTCCACTAGCCAAGTCTCTGAGACTATCCGGATCCTCTCTTCGCTACGGACGCCCTT TTCCGTCAAGTCCGGCGGACATGCTGCCTTTGAAAACGGCTCTAACACCCCAAACGGCATCACCATAGATCTAGT CAACCTCAACGACATCATTGTCTCTCCCGGTCGCCAAACCGTCTCCATCGGCCCGGGCAACAGATGGATCAACGT CTCCCGCGCCCTAGACCCTCATGGTTTGGCCGTGGTCGGCGGCAGGGCTGCCGATGTTGGTGTGAGCGGTCTCAT CCTCGGAGGCGGCATCTCCTACTTCTCCGGGAGCCGCGGATGGGCCTGTGACAACGTCCGCAACTACGAGGTCGT CGTTTCTTCTGGCAGAATCGTCCAAGCCTCGCCTTCTGTCAATCCTGATCTGTATTGGGCTCTTCGCGGTGGCGG CGGCTCGAATTTCGGCATCGTTACTCGTTTCGACGTCGAGGCGTTCCCCCAAGGCGATTTATGGACGAGCTCAAT CAGCTTTCCTGCTTCGCTTAACCAGACGGTCGTCTCGCTGTTTCAAGAACTGAGCAGTAGAGGTTTCGAGCAAGA TCCTTTGGCTCATTTCTACTTCGTCATGACGTATGAGAGCCGTTCTGACGATTTCTTGATCCTTACCAGCTTCTT CCATCCAGACCCTCCCGCAGATGGCGCCATACCCCCTGTATTTCTCCCTTTTCACTCGACTCCAGGCGGTACGCC GCTGGCCAATGGCACTCGTCGAGCAAGTGTCTCGGCTCTGTCCATGGCCATTGACCAACCGTCTGGCTCTCGTCA GACATGGTGGGACACGTCCGTCGACGTCTCCTCGGCCAAACTCTTCCAAGACATTGTGTCTCTTTTCGAAGCTTT CGTCAAGGATTTTGCTGTTCGCGCGGCGAATACAGAGCTCACACCCTACCTGATATTCCAGCCGATATCTCCGAG CGTCATCAACGCCATGCAGAAGAACGGCGGGAATGCACTCGGTCTCATACCCGAGGACGGGCCGCTCATGATTGT GCAATTAGCCGTGTCCTGGAGCGACGAACAGCTGGATTCCTACGTCGAGAAGTCTTCGGCAGCTTTGATCGAGCA GATTGACGAGCTCTCGAGACAGGGGAGTCTGTTCCGCGGTTTTCGCTACATGAATTACGCTGGTCGAGATCAAAA TGTCTTTGCGAGCTATGGGAACCGGAGTCTTGGTCGATTAAAGGCGATTGCTGAGCGCTGGGATCCGGACGGTGT GTTTCGAGACTTGTGGAAGGGTTACTTTAAGCTGTGA |