Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06418
Gene name
Locationscaffold_07:2318215..2318570
Strand+
Gene length (bp)355
Transcript length (bp)282
Coding sequence length (bp)282
Protein length (aa) 94

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PFAM Domains

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 69 91 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06418
MKFTQALVTLALVGGSIAQSSSTSTASVARITVSTTTQHRSSESSATGARTSDSSSETSSHRSSSSTGAAAVPTA
AAMNIVPVLGMAVAVLAV*
Coding >Ophcf2|06418
ATGAAGTTCACTCAGGCTCTCGTCACCCTGGCCCTGGTCGGCGGCTCCATTGCCCAGAGCTCGAGCACAAGCACT
GCCTCGGTCGCTCGCATCACCGTCTCAACCACGACTCAGCACCGGAGCTCCGAGTCGAGCGCGACGGGAGCCCGG
ACCTCGGATAGCTCTTCGGAGACGTCCTCGCACCGCTCCAGCTCGTCGACTGGCGCTGCGGCCGTGCCCACGGCT
GCTGCCATGAACATCGTTCCTGTTCTGGGTATGGCCGTTGCTGTCCTGGCTGTTTAG
Transcript >Ophcf2|06418
ATGAAGTTCACTCAGGCTCTCGTCACCCTGGCCCTGGTCGGCGGCTCCATTGCCCAGAGCTCGAGCACAAGCACT
GCCTCGGTCGCTCGCATCACCGTCTCAACCACGACTCAGCACCGGAGCTCCGAGTCGAGCGCGACGGGAGCCCGG
ACCTCGGATAGCTCTTCGGAGACGTCCTCGCACCGCTCCAGCTCGTCGACTGGCGCTGCGGCCGTGCCCACGGCT
GCTGCCATGAACATCGTTCCTGTTCTGGGTATGGCCGTTGCTGTCCTGGCTGTTTAG
Gene >Ophcf2|06418
ATGAAGTTCACTCAGGCTCTCGTCACCCTGGCCCTGGTCGGCGGCTCCATTGCCCAGAGGTGAGCTTACCCACCG
TCTAGCTACTTACTACCAGCTCTCTCTGTTCATCTTGAGCTGACGCGTCTTTGGCAGCTCGAGCACAAGCACTGC
CTCGGTCGCTCGCATCACCGTCTCAACCACGACTCAGCACCGGAGCTCCGAGTCGAGCGCGACGGGAGCCCGGAC
CTCGGATAGCTCTTCGGAGACGTCCTCGCACCGCTCCAGCTCGTCGACTGGCGCTGCGGCCGTGCCCACGGCTGC
TGCCATGAACATCGTTCCTGTTCTGGGTATGGCCGTTGCTGTCCTGGCTGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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