Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06352
Gene name
Locationscaffold_07:2080040..2081458
Strand-
Gene length (bp)1418
Transcript length (bp)1107
Coding sequence length (bp)1107
Protein length (aa) 369

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01822 WSC WSC domain 3.8E-11 27 99

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 246 268 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06352
MAASSIRGLCPLFLLLACVSALDFNLCASFNTADSPQNISIYQTNGLCHDFCLQNNQAYGITQGNSCWCSDYTPA
KDTQVDKSKCDRPCPAYPDESCGGQGVFGYLALNNIMPSGTKGPSKPDKPQPTSVPPPSAETPTATAWVTKTVQD
TVTPLHPPSPSSSNVVPRSSTDEATISDPPSPTPPSSSSSSSASPTSIIQTVTADGRVQYITVMPTPSASSSANT
TGKETADDRTEQSGLGKGAVVGLTMGIIAAAAATAAMGLYMWVQRKKRRGEDYPDDPSIRGSSSGILGGRPEVSG
IPGSPESTGNRSSTLQIDPRMDPFKQGLYARSGSHESINTLRDEHDYSRRIQQPKVLRAMNPDPVAED*
Coding >Ophcf2|06352
ATGGCGGCCTCTTCCATCCGCGGCCTCTGCCCGCTCTTCCTACTGCTGGCCTGCGTCTCCGCCCTCGACTTCAAC
CTGTGTGCCAGCTTCAACACAGCCGACTCGCCTCAGAACATTAGCATATACCAGACCAATGGCCTCTGTCACGAC
TTTTGCCTCCAAAACAACCAGGCCTATGGCATCACTCAAGGAAACTCGTGTTGGTGCTCCGACTACACGCCCGCC
AAAGACACGCAGGTCGACAAGAGCAAATGCGACCGCCCTTGTCCCGCCTACCCCGACGAGTCTTGCGGCGGCCAG
GGCGTCTTTGGTTACCTCGCTCTCAACAACATCATGCCTTCGGGCACAAAGGGACCTTCCAAGCCCGACAAGCCC
CAGCCTACATCGGTTCCTCCTCCCTCGGCTGAAACCCCGACGGCGACGGCGTGGGTCACCAAGACTGTGCAGGAC
ACAGTGACCCCCCTTCATCCTCCTTCTCCGTCCAGTTCGAATGTCGTCCCCCGTTCTTCTACCGATGAAGCCACC
ATCAGCGATCCCCCTTCCCCTACCCCTCCGTCGTCGTCGTCATCATCATCGGCGTCACCAACCTCCATCATCCAG
ACCGTCACCGCCGACGGCAGGGTCCAGTACATTACCGTCATGCCGACGCCATCGGCCTCGTCCTCGGCCAACACC
ACGGGCAAGGAAACGGCTGACGACCGAACGGAGCAGTCGGGCCTGGGCAAGGGAGCAGTCGTCGGACTCACCATG
GGCATAATAGCCGCCGCCGCCGCGACCGCCGCCATGGGCCTCTACATGTGGGTTCAGCGCAAGAAGCGACGCGGC
GAAGACTATCCCGACGACCCCAGCATCCGCGGCAGCTCCTCGGGTATCCTCGGCGGCCGTCCCGAGGTGTCGGGC
ATCCCCGGCTCTCCCGAGTCGACGGGCAACCGGAGCAGCACGTTGCAGATCGACCCTCGAATGGACCCCTTTAAG
CAGGGTCTCTACGCCCGCAGCGGCAGTCACGAGAGCATCAACACGCTCCGCGACGAGCACGACTACTCGAGGAGG
ATCCAGCAGCCCAAGGTGCTGCGGGCCATGAACCCGGACCCGGTCGCCGAAGACTGA
Transcript >Ophcf2|06352
ATGGCGGCCTCTTCCATCCGCGGCCTCTGCCCGCTCTTCCTACTGCTGGCCTGCGTCTCCGCCCTCGACTTCAAC
CTGTGTGCCAGCTTCAACACAGCCGACTCGCCTCAGAACATTAGCATATACCAGACCAATGGCCTCTGTCACGAC
TTTTGCCTCCAAAACAACCAGGCCTATGGCATCACTCAAGGAAACTCGTGTTGGTGCTCCGACTACACGCCCGCC
AAAGACACGCAGGTCGACAAGAGCAAATGCGACCGCCCTTGTCCCGCCTACCCCGACGAGTCTTGCGGCGGCCAG
GGCGTCTTTGGTTACCTCGCTCTCAACAACATCATGCCTTCGGGCACAAAGGGACCTTCCAAGCCCGACAAGCCC
CAGCCTACATCGGTTCCTCCTCCCTCGGCTGAAACCCCGACGGCGACGGCGTGGGTCACCAAGACTGTGCAGGAC
ACAGTGACCCCCCTTCATCCTCCTTCTCCGTCCAGTTCGAATGTCGTCCCCCGTTCTTCTACCGATGAAGCCACC
ATCAGCGATCCCCCTTCCCCTACCCCTCCGTCGTCGTCGTCATCATCATCGGCGTCACCAACCTCCATCATCCAG
ACCGTCACCGCCGACGGCAGGGTCCAGTACATTACCGTCATGCCGACGCCATCGGCCTCGTCCTCGGCCAACACC
ACGGGCAAGGAAACGGCTGACGACCGAACGGAGCAGTCGGGCCTGGGCAAGGGAGCAGTCGTCGGACTCACCATG
GGCATAATAGCCGCCGCCGCCGCGACCGCCGCCATGGGCCTCTACATGTGGGTTCAGCGCAAGAAGCGACGCGGC
GAAGACTATCCCGACGACCCCAGCATCCGCGGCAGCTCCTCGGGTATCCTCGGCGGCCGTCCCGAGGTGTCGGGC
ATCCCCGGCTCTCCCGAGTCGACGGGCAACCGGAGCAGCACGTTGCAGATCGACCCTCGAATGGACCCCTTTAAG
CAGGGTCTCTACGCCCGCAGCGGCAGTCACGAGAGCATCAACACGCTCCGCGACGAGCACGACTACTCGAGGAGG
ATCCAGCAGCCCAAGGTGCTGCGGGCCATGAACCCGGACCCGGTCGCCGAAGACTGA
Gene >Ophcf2|06352
ATGGCGGCCTCTTCCATCCGCGGCCTCTGCCCGCTCTTCCTACTGCTGGCCTGCGTCTCCGCCCTCGACTTCAAC
CTGTGTGCCAGCTTCAACACAGCCGACTCGCCTCAGAGTTGGTCACCACCCTCCCATTTCCCTTGTTGCATCTTG
GGCTGACTTTCCTTCCATCCAGACATTAGCATATACCAGACCAATGGCCTCTGTCACGACTTTTGCCTCCAAAAC
AACCAGGCCTATGGCATCACTCAAGGAAACTCGTGTTGGTGCTCCGACTACACGCCCGCCAAAGACACGCAGGTC
GACAAGAGCAAATGCGACCGCCCTTGTCCCGCCTACCCCGACGAGTCTTGCGGCGGCCAGGGCGTCTTTGGTTAC
CTCGCTCTCAACAACATCATGCCTTCGGGCACAAAGGGACCTTCCAAGCCCGACAAGCCCCAGCCTACATCGGTT
CCTCCTCCCTCGGTCAGTTCCTCGTCCCCTCCTTTCCTTGAGTCTCTTGTCATTTCTCTTCTCTCGCCGTGCCAA
CTTGCCGTTTCCGTTTCCGTTTCCCTTTCCGTCGCCGCCACCGCCGCCCAACCACCTCCATCCGACCTCCAGACC
AACAAGGCGAGGCTAGGCTTATCTGTCCCAACTCCAGGCTGAAACCCCGACGGCGACGGCGTGGGTCACCAAGAC
TGTGCAGGACACAGTGACCCCCCTTCATCCTCCTTCTCCGTCCAGTTCGAATGTCGTCCCCCGTTCTGTATGCTC
AAGCTTGTTTTTTTTTATTGCTTTCTCTCGCTTCCGCTATCGAGACGAGAAGCTGACGTTGCCAATAGTCTACCG
ATGAAGCCACCATCAGCGATCCCCCTTCCCCTACCCCTCCGTCGTCGTCGTCATCATCATCGGCGTCACCAACCT
CCATCATCCAGACCGTCACCGCCGACGGCAGGGTCCAGTACATTACCGTCATGCCGACGCCATCGGCCTCGTCCT
CGGCCAACACCACGGGCAAGGAAACGGCTGACGACCGAACGGAGCAGTCGGGCCTGGGCAAGGGAGCAGTCGTCG
GACTCACCATGGGCATAATAGCCGCCGCCGCCGCGACCGCCGCCATGGGCCTCTACATGTGGGTTCAGCGCAAGA
AGCGACGCGGCGAAGACTATCCCGACGACCCCAGCATCCGCGGCAGCTCCTCGGGTATCCTCGGCGGCCGTCCCG
AGGTGTCGGGCATCCCCGGCTCTCCCGAGTCGACGGGCAACCGGAGCAGCACGTTGCAGATCGACCCTCGAATGG
ACCCCTTTAAGCAGGGTCTCTACGCCCGCAGCGGCAGTCACGAGAGCATCAACACGCTCCGCGACGAGCACGACT
ACTCGAGGAGGATCCAGCAGCCCAAGGTGCTGCGGGCCATGAACCCGGACCCGGTCGCCGAAGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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