Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06351
Gene name
Locationscaffold_07:2078545..2079394
Strand+
Gene length (bp)849
Transcript length (bp)849
Coding sequence length (bp)849
Protein length (aa) 283

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00271 Helicase_C Helicase conserved C-terminal domain 9.4E-19 9 112

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06351
MAALVRERKEVGPAFKAIVFVPTTAFTGFVTHIINRLCPGLPAAAYMDRRSRQNLRVAVLNEFRLARSGILVATD
VAARGLNIPSVTSVFQMGLPFDSASYVHRLGRTGRAGCSGIGTVILSEAEEWYVDAHLSSFTLERRDADLDDARA
RLNPFLRDLNLSTRTKLYQHFLGFYSRYLKGFAWSKQQLVDQANAYARDGLLSPSQPYLRQDLAAAMGLRDLPNL
RIGVEEGVDVDRDYPWPIQPIQCRAGMAWREPGTWGKERELIIKNKGPLKWQAVPGG*
Coding >Ophcf2|06351
ATGGCCGCCCTCGTCCGTGAGAGGAAAGAGGTGGGCCCCGCGTTCAAAGCAATCGTCTTCGTCCCCACGACGGCC
TTCACGGGCTTCGTCACCCACATCATCAACAGACTCTGTCCGGGCCTCCCAGCAGCAGCCTACATGGACCGCCGC
TCCCGACAGAACCTCCGGGTCGCCGTCCTCAACGAATTCCGCCTCGCCAGGTCCGGCATCCTCGTCGCCACAGAC
GTAGCCGCCCGAGGCCTCAACATCCCATCCGTCACCTCGGTCTTCCAAATGGGCCTCCCCTTCGACAGCGCGAGC
TACGTCCACAGGCTGGGCCGCACCGGCCGAGCAGGCTGCTCCGGGATCGGAACCGTGATCCTCTCCGAGGCGGAG
GAGTGGTACGTAGACGCCCACCTCTCCTCCTTCACCCTCGAGCGCCGAGACGCCGACCTCGACGACGCGAGGGCA
AGGTTGAACCCCTTCCTCCGAGACCTCAACCTCTCGACCCGCACCAAGCTATACCAGCACTTCCTGGGCTTCTAC
AGCCGCTACCTGAAGGGCTTCGCCTGGTCCAAGCAACAGCTCGTCGACCAGGCAAACGCCTACGCCAGGGACGGC
CTCCTCTCCCCCTCCCAGCCCTACCTCCGCCAGGACCTCGCCGCGGCGATGGGCCTCCGCGACCTCCCCAACCTC
CGCATCGGCGTCGAGGAGGGCGTCGACGTAGACCGCGACTACCCTTGGCCCATCCAGCCCATCCAGTGTCGCGCC
GGCATGGCTTGGAGGGAGCCCGGGACCTGGGGGAAGGAGAGGGAGCTCATCATCAAGAACAAGGGGCCTCTCAAG
TGGCAGGCCGTCCCCGGCGGTTGA
Transcript >Ophcf2|06351
ATGGCCGCCCTCGTCCGTGAGAGGAAAGAGGTGGGCCCCGCGTTCAAAGCAATCGTCTTCGTCCCCACGACGGCC
TTCACGGGCTTCGTCACCCACATCATCAACAGACTCTGTCCGGGCCTCCCAGCAGCAGCCTACATGGACCGCCGC
TCCCGACAGAACCTCCGGGTCGCCGTCCTCAACGAATTCCGCCTCGCCAGGTCCGGCATCCTCGTCGCCACAGAC
GTAGCCGCCCGAGGCCTCAACATCCCATCCGTCACCTCGGTCTTCCAAATGGGCCTCCCCTTCGACAGCGCGAGC
TACGTCCACAGGCTGGGCCGCACCGGCCGAGCAGGCTGCTCCGGGATCGGAACCGTGATCCTCTCCGAGGCGGAG
GAGTGGTACGTAGACGCCCACCTCTCCTCCTTCACCCTCGAGCGCCGAGACGCCGACCTCGACGACGCGAGGGCA
AGGTTGAACCCCTTCCTCCGAGACCTCAACCTCTCGACCCGCACCAAGCTATACCAGCACTTCCTGGGCTTCTAC
AGCCGCTACCTGAAGGGCTTCGCCTGGTCCAAGCAACAGCTCGTCGACCAGGCAAACGCCTACGCCAGGGACGGC
CTCCTCTCCCCCTCCCAGCCCTACCTCCGCCAGGACCTCGCCGCGGCGATGGGCCTCCGCGACCTCCCCAACCTC
CGCATCGGCGTCGAGGAGGGCGTCGACGTAGACCGCGACTACCCTTGGCCCATCCAGCCCATCCAGTGTCGCGCC
GGCATGGCTTGGAGGGAGCCCGGGACCTGGGGGAAGGAGAGGGAGCTCATCATCAAGAACAAGGGGCCTCTCAAG
TGGCAGGCCGTCCCCGGCGGTTGA
Gene >Ophcf2|06351
ATGGCCGCCCTCGTCCGTGAGAGGAAAGAGGTGGGCCCCGCGTTCAAAGCAATCGTCTTCGTCCCCACGACGGCC
TTCACGGGCTTCGTCACCCACATCATCAACAGACTCTGTCCGGGCCTCCCAGCAGCAGCCTACATGGACCGCCGC
TCCCGACAGAACCTCCGGGTCGCCGTCCTCAACGAATTCCGCCTCGCCAGGTCCGGCATCCTCGTCGCCACAGAC
GTAGCCGCCCGAGGCCTCAACATCCCATCCGTCACCTCGGTCTTCCAAATGGGCCTCCCCTTCGACAGCGCGAGC
TACGTCCACAGGCTGGGCCGCACCGGCCGAGCAGGCTGCTCCGGGATCGGAACCGTGATCCTCTCCGAGGCGGAG
GAGTGGTACGTAGACGCCCACCTCTCCTCCTTCACCCTCGAGCGCCGAGACGCCGACCTCGACGACGCGAGGGCA
AGGTTGAACCCCTTCCTCCGAGACCTCAACCTCTCGACCCGCACCAAGCTATACCAGCACTTCCTGGGCTTCTAC
AGCCGCTACCTGAAGGGCTTCGCCTGGTCCAAGCAACAGCTCGTCGACCAGGCAAACGCCTACGCCAGGGACGGC
CTCCTCTCCCCCTCCCAGCCCTACCTCCGCCAGGACCTCGCCGCGGCGATGGGCCTCCGCGACCTCCCCAACCTC
CGCATCGGCGTCGAGGAGGGCGTCGACGTAGACCGCGACTACCCTTGGCCCATCCAGCCCATCCAGTGTCGCGCC
GGCATGGCTTGGAGGGAGCCCGGGACCTGGGGGAAGGAGAGGGAGCTCATCATCAAGAACAAGGGGCCTCTCAAG
TGGCAGGCCGTCCCCGGCGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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