Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|06347
Gene name
Location	scaffold_07:2015101..2016656
Strand	-
Gene length (bp)	1555
Transcript length (bp)	1386
Coding sequence length (bp)	1386
Protein length (aa)	462

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	4.0E-44	71	408

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 28	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	45.28	25.16	65.40
Alive	In ants, during behavior modification	78.93	44.34	113.52
Dead	In ants, recently dead	76.71	43.39	110.04

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.001768	yes
Alive	Dead	0.895058	no
Dead	Fungus	0.004376	yes

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|06347 MTFASTSTSTEDGARPRYKRVSSQPENPLSELVSDQQIAIVPEFTLESGVKLYNVPVAYTTRGELSAEADNAMVI CHALTGSADVSDWWGPLLGGPGRAFDTSRFYVVCINSLGSPYGTASPVTARDGDASKGRYGPEFPLTTIRDDVRL HKLLLDELGVRRLAAVIGGSMGGMLVLEWAYLGVDFVRCIVPIATSSRHSAWGISWGEAQRQSIYADPKYDDGYY ALDDPPTTGLGAARMSALLTYRSRDSFESRFGRKTPDPSRAQAIVDCDTSFGIHNDGHAVKRRPTPTPSPANGQP GPLKTSTSTSTYFSAQSYLRYQGTKFVKRFDGNCYIALTRKLDTHDVSRGRAATTATALGLIQQPTLVLGIETDG LFTFDEQQEIATHVANARLERIDSSEGHDAFLLQFEQVNRHILTFLNEVLPDIMGRDGTASQACEPDRLTTTSTF GEAEVEDMTAW*
Coding	>Ophcf2\|06347 ATGACGTTCGCCAGTACGAGTACGTCTACCGAGGATGGCGCCCGCCCGCGATACAAAAGAGTGTCTTCGCAGCCC GAGAACCCCCTTTCAGAGCTCGTGTCCGACCAGCAGATAGCCATTGTCCCCGAATTCACGCTCGAATCCGGCGTC AAGCTCTACAACGTGCCCGTCGCCTACACGACCCGGGGCGAGCTGTCGGCCGAGGCGGACAACGCCATGGTCATC TGCCACGCACTGACGGGCAGCGCCGACGTGAGCGACTGGTGGGGGCCTCTGCTGGGCGGGCCGGGCCGTGCCTTT GACACGTCGCGCTTCTACGTCGTCTGCATCAACAGCCTGGGCAGCCCGTACGGCACGGCGAGCCCCGTGACGGCC AGGGACGGCGACGCGAGCAAGGGCCGATACGGGCCCGAATTTCCGCTGACGACGATCCGCGACGACGTGAGGCTT CACAAGCTGCTCCTCGACGAGCTCGGCGTCAGACGCCTAGCCGCCGTCATCGGCGGATCGATGGGCGGGATGCTG GTGCTGGAATGGGCGTACCTGGGCGTCGACTTTGTCCGGTGCATCGTGCCCATCGCCACCTCGAGCCGACACAGC GCCTGGGGCATCAGCTGGGGCGAAGCACAGCGGCAGAGCATCTACGCAGACCCCAAGTACGACGACGGCTACTAC GCGCTCGACGATCCGCCGACGACGGGCCTGGGCGCCGCCCGCATGTCGGCGTTGCTGACGTACCGGAGCCGCGAT TCATTCGAGTCTCGGTTCGGACGCAAGACGCCAGACCCATCGAGGGCGCAGGCGATTGTCGACTGCGATACGAGC TTCGGGATTCACAACGACGGACACGCCGTGAAGCGAAGGCCGACGCCGACGCCCTCTCCGGCCAACGGACAGCCT GGTCCCCTCAAGACATCGACCTCGACATCGACGTACTTTTCCGCACAGTCATATCTCCGCTACCAAGGCACCAAG TTCGTCAAGCGCTTCGACGGCAACTGCTACATCGCACTGACGCGTAAGCTCGACACGCACGACGTATCCCGCGGA CGAGCGGCGACGACGGCAACAGCCCTCGGCTTGATCCAGCAGCCGACGCTAGTCCTAGGCATCGAAACAGACGGC CTCTTCACCTTTGACGAACAACAGGAGATTGCGACGCACGTAGCCAACGCACGGCTCGAACGCATCGACAGCTCC GAAGGCCACGATGCGTTCCTACTGCAGTTTGAGCAGGTGAACCGACACATCCTGACCTTTCTCAACGAGGTGCTA CCTGACATTATGGGCCGTGACGGGACGGCATCCCAGGCGTGCGAACCGGATCGCCTGACTACTACCAGTACGTTT GGCGAGGCCGAAGTTGAGGACATGACGGCCTGGTAG
Transcript	>Ophcf2\|06347 ATGACGTTCGCCAGTACGAGTACGTCTACCGAGGATGGCGCCCGCCCGCGATACAAAAGAGTGTCTTCGCAGCCC GAGAACCCCCTTTCAGAGCTCGTGTCCGACCAGCAGATAGCCATTGTCCCCGAATTCACGCTCGAATCCGGCGTC AAGCTCTACAACGTGCCCGTCGCCTACACGACCCGGGGCGAGCTGTCGGCCGAGGCGGACAACGCCATGGTCATC TGCCACGCACTGACGGGCAGCGCCGACGTGAGCGACTGGTGGGGGCCTCTGCTGGGCGGGCCGGGCCGTGCCTTT GACACGTCGCGCTTCTACGTCGTCTGCATCAACAGCCTGGGCAGCCCGTACGGCACGGCGAGCCCCGTGACGGCC AGGGACGGCGACGCGAGCAAGGGCCGATACGGGCCCGAATTTCCGCTGACGACGATCCGCGACGACGTGAGGCTT CACAAGCTGCTCCTCGACGAGCTCGGCGTCAGACGCCTAGCCGCCGTCATCGGCGGATCGATGGGCGGGATGCTG GTGCTGGAATGGGCGTACCTGGGCGTCGACTTTGTCCGGTGCATCGTGCCCATCGCCACCTCGAGCCGACACAGC GCCTGGGGCATCAGCTGGGGCGAAGCACAGCGGCAGAGCATCTACGCAGACCCCAAGTACGACGACGGCTACTAC GCGCTCGACGATCCGCCGACGACGGGCCTGGGCGCCGCCCGCATGTCGGCGTTGCTGACGTACCGGAGCCGCGAT TCATTCGAGTCTCGGTTCGGACGCAAGACGCCAGACCCATCGAGGGCGCAGGCGATTGTCGACTGCGATACGAGC TTCGGGATTCACAACGACGGACACGCCGTGAAGCGAAGGCCGACGCCGACGCCCTCTCCGGCCAACGGACAGCCT GGTCCCCTCAAGACATCGACCTCGACATCGACGTACTTTTCCGCACAGTCATATCTCCGCTACCAAGGCACCAAG TTCGTCAAGCGCTTCGACGGCAACTGCTACATCGCACTGACGCGTAAGCTCGACACGCACGACGTATCCCGCGGA CGAGCGGCGACGACGGCAACAGCCCTCGGCTTGATCCAGCAGCCGACGCTAGTCCTAGGCATCGAAACAGACGGC CTCTTCACCTTTGACGAACAACAGGAGATTGCGACGCACGTAGCCAACGCACGGCTCGAACGCATCGACAGCTCC GAAGGCCACGATGCGTTCCTACTGCAGTTTGAGCAGGTGAACCGACACATCCTGACCTTTCTCAACGAGGTGCTA CCTGACATTATGGGCCGTGACGGGACGGCATCCCAGGCGTGCGAACCGGATCGCCTGACTACTACCAGTACGTTT GGCGAGGCCGAAGTTGAGGACATGACGGCCTGGTAG
Gene	>Ophcf2\|06347 ATGACGTTCGCCAGTACGAGTACGTCTACCGAGGATGGCGCCCGCCCGCGATACAGTCAGTGACTCCCCCCCCCC CTTATCCACGAATCACCACCACCATGAGGACTGAACAGACGCAAGAAAGAGTGTCTTCGCAGCCCGAGAACCCCC TTTCAGAGCTCGTGTCCGACCAGCAGATAGCCATTGTCCCCGAATTCACGCTCGAATCCGGCGTCAAGCTCTACA ACGTGCCCGTCGCCTACACGACCCGGGGCGAGCTGTCGGCCGAGGCGGACAACGCCATGGTCATCTGCCACGCAC TGACGGGCAGCGCCGACGTGAGCGACTGGTGGGGGCCTCTGCTGGGCGGGCCGGGCCGTGCCTTTGACACGTCGC GCTTCTACGTCGTCTGCATCAACAGCCTGGGCAGCCCGTACGGCACGGCGAGCCCCGTGACGGCCAGGGACGGCG ACGCGAGCAAGGGCCGATACGGGCCCGAATTTCCGCTGACGACGATCCGCGACGACGTGAGGTGGGAACGCTAGC AAGAGAGAAGGAGTCGGAGACAAAGACGTGGTGAACAGAGGCGGCTGACGACTTTGCAACCTCGCATTCTATCTC CCTCTTGTTCTGCAGGCTTCACAAGCTGCTCCTCGACGAGCTCGGCGTCAGACGCCTAGCCGCCGTCATCGGCGG ATCGATGGGCGGGATGCTGGTGCTGGAATGGGCGTACCTGGGCGTCGACTTTGTCCGGTGCATCGTGCCCATCGC CACCTCGAGCCGACACAGCGCCTGGGGCATCAGCTGGGGCGAAGCACAGCGGCAGAGCATCTACGCAGACCCCAA GTACGACGACGGCTACTACGCGCTCGACGATCCGCCGACGACGGGCCTGGGCGCCGCCCGCATGTCGGCGTTGCT GACGTACCGGAGCCGCGATTCATTCGAGTCTCGGTTCGGACGCAAGACGCCAGACCCATCGAGGGCGCAGGCGAT TGTCGACTGCGATACGAGCTTCGGGATTCACAACGACGGACACGCCGTGAAGCGAAGGCCGACGCCGACGCCCTC TCCGGCCAACGGACAGCCTGGTCCCCTCAAGACATCGACCTCGACATCGACGTACTTTTCCGCACAGTCATATCT CCGCTACCAAGGCACCAAGTTCGTCAAGCGCTTCGACGGCAACTGCTACATCGCACTGACGCGTAAGCTCGACAC GCACGACGTATCCCGCGGACGAGCGGCGACGACGGCAACAGCCCTCGGCTTGATCCAGCAGCCGACGCTAGTCCT AGGCATCGAAACAGACGGCCTCTTCACCTTTGACGAACAACAGGAGATTGCGACGCACGTAGCCAACGCACGGCT CGAACGCATCGACAGCTCCGAAGGCCACGATGCGTTCCTACTGCAGTTTGAGCAGGTGAACCGACACATCCTGAC CTTTCTCAACGAGGTGCTACCTGACATTATGGGCCGTGACGGGACGGCATCCCAGGCGTGCGAACCGGATCGCCT GACTACTACCAGTACGTTTGGCGAGGCCGAAGTTGAGGACATGACGGCCTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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