Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06327
Gene name
Locationscaffold_07:1965453..1967320
Strand+
Gene length (bp)1867
Transcript length (bp)1635
Coding sequence length (bp)1635
Protein length (aa) 545

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 22 44 22
2 56 78 22
3 91 113 22
4 153 175 22
5 204 226 22
6 246 268 22
7 272 294 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06327
MGSEFGVRPDTKPELRLDAVGVFWIVWGVVWTVVVIAGMSFLYVRREIPLLRIRGLPLSLAAVALMHFYWFAVQL
GYVYGPLMPEVAEYFIMSVWFPFGIALFHASNSRFLYVARAQKKYVMNAIDSGWDPERPRIRRTMLARWRMLDYS
YKMLLVVALGMGFQLFLTLFMFIISRKFHSSFGIPGTEVEGTYMEKKTEQGRGWEWWPSVLWQIFWAWIVAPVIL
WRARHLRDTQGWRTQTIACCIASLHASPMWLIALYVPGMAPVNNYFIPPQWIALSIMCIEIFTIFIPCWQVRKQQ
ALCQETLDSIARWESRQKSATHCGKSLSSSTPSWMRKAESISSSGNGSILTMDALEHTLAKNPEPLQHFSALRDF
SGENIAFLTRVREWRATYLVPASRPTTMVDEKKLETDSDVSTLSRECFEGALLIYMDFISSNSAEFQVNLSSQDF
KNLQAVFEPAARVMYGDNASPDPATPFQEAPRALTSDSHHRIRYRGDIPDLFTDTVFDDSEMSIKYLVLTNTWPK
FIKERRSFDAASSVEGARN*
Coding >Ophcf2|06327
ATGGGTTCCGAGTTCGGCGTGAGGCCCGACACCAAGCCCGAGCTACGGCTCGATGCCGTCGGCGTCTTCTGGATC
GTCTGGGGAGTCGTCTGGACCGTCGTCGTCATCGCCGGCATGAGTTTTCTCTACGTCCGCCGGGAGATTCCGCTC
CTTCGCATCAGGGGGTTGCCCTTGTCGTTGGCCGCCGTAGCCTTGATGCACTTTTACTGGTTTGCTGTTCAGCTG
GGTTATGTTTACGGTCCGTTGATGCCCGAGGTTGCCGAGTACTTCATCATGAGTGTTTGGTTCCCCTTTGGCATT
GCCCTGTTTCATGCCTCCAACAGTCGTTTCCTCTACGTTGCTCGCGCGCAGAAGAAGTATGTCATGAACGCCATC
GACTCGGGCTGGGATCCGGAAAGGCCACGGATTCGCAGGACGATGCTGGCTCGTTGGCGCATGTTGGATTACAGC
TACAAGATGTTGCTGGTCGTCGCGCTGGGCATGGGTTTCCAGCTCTTCCTCACGCTCTTCATGTTCATCATCTCA
CGCAAGTTCCACTCGTCCTTTGGCATCCCCGGGACCGAAGTCGAGGGCACTTACATGGAGAAGAAGACGGAGCAG
GGCCGCGGATGGGAATGGTGGCCGTCCGTCTTGTGGCAAATCTTCTGGGCCTGGATCGTGGCTCCCGTCATTCTC
TGGCGAGCTCGTCACCTCCGCGATACTCAGGGGTGGCGAACGCAGACGATAGCCTGCTGTATAGCAAGTCTCCAC
GCTTCTCCCATGTGGCTCATCGCCCTCTACGTCCCCGGCATGGCCCCCGTCAACAACTACTTCATCCCCCCCCAA
TGGATCGCCCTGTCCATCATGTGCATCGAAATCTTCACCATCTTCATCCCCTGCTGGCAAGTCCGCAAGCAGCAG
GCTCTCTGCCAGGAGACGCTCGACTCCATCGCCCGCTGGGAATCGCGTCAAAAGTCGGCCACGCACTGCGGCAAG
TCGCTGTCTTCCAGCACGCCCTCGTGGATGCGAAAGGCCGAGTCCATCAGCAGCTCCGGAAACGGCAGCATCCTC
ACCATGGACGCGCTGGAGCACACGCTGGCCAAGAACCCGGAACCCCTGCAGCACTTCTCGGCGCTGAGGGACTTT
TCCGGCGAGAACATCGCCTTCTTGACTAGGGTTCGCGAGTGGAGGGCCACGTATCTGGTTCCCGCGAGCCGACCT
ACGACCATGGTCGATGAGAAGAAGCTGGAGACGGATTCGGACGTGTCGACGCTGTCGAGAGAGTGTTTCGAGGGC
GCGCTCCTCATCTACATGGACTTCATCAGCAGTAACAGCGCCGAGTTCCAGGTCAACCTCTCGTCTCAAGACTTC
AAGAACCTTCAGGCCGTCTTCGAGCCGGCAGCCCGAGTCATGTACGGCGACAACGCGAGTCCGGATCCGGCAACG
CCCTTCCAAGAGGCGCCACGAGCGCTGACGAGCGATTCGCATCATCGGATACGATATCGTGGCGATATCCCCGAT
CTCTTCACCGATACCGTCTTTGACGACTCGGAGATGAGCATCAAGTATCTCGTCCTGACCAACACTTGGCCCAAG
TTTATAAAGGAGAGGAGGTCGTTTGATGCCGCCAGCAGCGTCGAGGGTGCCCGGAACTGA
Transcript >Ophcf2|06327
ATGGGTTCCGAGTTCGGCGTGAGGCCCGACACCAAGCCCGAGCTACGGCTCGATGCCGTCGGCGTCTTCTGGATC
GTCTGGGGAGTCGTCTGGACCGTCGTCGTCATCGCCGGCATGAGTTTTCTCTACGTCCGCCGGGAGATTCCGCTC
CTTCGCATCAGGGGGTTGCCCTTGTCGTTGGCCGCCGTAGCCTTGATGCACTTTTACTGGTTTGCTGTTCAGCTG
GGTTATGTTTACGGTCCGTTGATGCCCGAGGTTGCCGAGTACTTCATCATGAGTGTTTGGTTCCCCTTTGGCATT
GCCCTGTTTCATGCCTCCAACAGTCGTTTCCTCTACGTTGCTCGCGCGCAGAAGAAGTATGTCATGAACGCCATC
GACTCGGGCTGGGATCCGGAAAGGCCACGGATTCGCAGGACGATGCTGGCTCGTTGGCGCATGTTGGATTACAGC
TACAAGATGTTGCTGGTCGTCGCGCTGGGCATGGGTTTCCAGCTCTTCCTCACGCTCTTCATGTTCATCATCTCA
CGCAAGTTCCACTCGTCCTTTGGCATCCCCGGGACCGAAGTCGAGGGCACTTACATGGAGAAGAAGACGGAGCAG
GGCCGCGGATGGGAATGGTGGCCGTCCGTCTTGTGGCAAATCTTCTGGGCCTGGATCGTGGCTCCCGTCATTCTC
TGGCGAGCTCGTCACCTCCGCGATACTCAGGGGTGGCGAACGCAGACGATAGCCTGCTGTATAGCAAGTCTCCAC
GCTTCTCCCATGTGGCTCATCGCCCTCTACGTCCCCGGCATGGCCCCCGTCAACAACTACTTCATCCCCCCCCAA
TGGATCGCCCTGTCCATCATGTGCATCGAAATCTTCACCATCTTCATCCCCTGCTGGCAAGTCCGCAAGCAGCAG
GCTCTCTGCCAGGAGACGCTCGACTCCATCGCCCGCTGGGAATCGCGTCAAAAGTCGGCCACGCACTGCGGCAAG
TCGCTGTCTTCCAGCACGCCCTCGTGGATGCGAAAGGCCGAGTCCATCAGCAGCTCCGGAAACGGCAGCATCCTC
ACCATGGACGCGCTGGAGCACACGCTGGCCAAGAACCCGGAACCCCTGCAGCACTTCTCGGCGCTGAGGGACTTT
TCCGGCGAGAACATCGCCTTCTTGACTAGGGTTCGCGAGTGGAGGGCCACGTATCTGGTTCCCGCGAGCCGACCT
ACGACCATGGTCGATGAGAAGAAGCTGGAGACGGATTCGGACGTGTCGACGCTGTCGAGAGAGTGTTTCGAGGGC
GCGCTCCTCATCTACATGGACTTCATCAGCAGTAACAGCGCCGAGTTCCAGGTCAACCTCTCGTCTCAAGACTTC
AAGAACCTTCAGGCCGTCTTCGAGCCGGCAGCCCGAGTCATGTACGGCGACAACGCGAGTCCGGATCCGGCAACG
CCCTTCCAAGAGGCGCCACGAGCGCTGACGAGCGATTCGCATCATCGGATACGATATCGTGGCGATATCCCCGAT
CTCTTCACCGATACCGTCTTTGACGACTCGGAGATGAGCATCAAGTATCTCGTCCTGACCAACACTTGGCCCAAG
TTTATAAAGGAGAGGAGGTCGTTTGATGCCGCCAGCAGCGTCGAGGGTGCCCGGAACTGA
Gene >Ophcf2|06327
ATGGGTTCCGAGTTCGGCGTGAGGCCCGACACCAAGCCCGAGCTACGGCTCGATGCCGTCGGCGTCTTCTGGATC
GTCTGGGGAGTCGTCTGGACCGTCGTCGTCATCGCCGGCATGAGTTTTCTCTACGTCCGCCGGGAGATTCCGCTC
CTTCGCATCAGGGGGTTGCCCTTGTCGTTGGCCGCCGTAGCCTTGATGCACTTTTACTGGTTTGCTGTTCAGCTG
GGTTATGTTTACGGTCCGTTGATGCCCGAGGTTGCCGAGTACTTCATCATGAGTGTTTGGTTCCCCTTTGGCATT
GCCCTGTTTCATGCCTCCAACAGTCGTTTCCTCTACGTTGCTCGCGCGCAGAAGAAGTATGTCATGAACGCCATC
GACTCGGGCTGGGATCCGGAAAGGCCACGGATTCGCAGGACGATGCTGGCTCGTTGGCGCATGTTGGATTACAGC
TACAAGATGTTGCTGGTCGTCGCGCTGGGCATGGGTTTCCAGGTAAAGACGGCCCCTACGTGACATGTATCTTTT
GATGATGATGATGATGATGATGATGATGATGATGATGAACATGGTCCGCTGACGATGTGTGAACAGCTCTTCCTC
ACGCTCTTCATGTTCATCATCTCACGCAAGTTCCACTCGTCCTTTGGCATCCCCGGGACCGAAGTCGAGGGCACT
TACATGGAGAAGAAGACGGAGCAGGGCCGCGGATGGGAATGGTATGTAGTTCCCAATCGACGAGGGGCTTTAAAT
GCCTTCAGATGACTTATACTACGACGCAGGTGGCCGTCCGTCTTGTGGCAAATCTTCTGGGCCTGGATCGTGGCT
CCCGTCATTCTCTGGCGAGCTCGTCACCTCCGCGATACTCAGGGGTGGCGAACGCAGACGATAGCCTGCTGTATA
GCAAGGTCGGTTTATCATGACTTGAACCAACAACTCCAACTTGGTGTGATATGTCTCCATGTTAACTCGGCTCAG
TCTCCACGCTTCTCCCATGTGGCTCATCGCCCTCTACGTCCCCGGCATGGCCCCCGTCAACAACTACTTCATCCC
CCCCCAATGGATCGCCCTGTCCATCATGTGCATCGAAATCTTCACCATCTTCATCCCCTGCTGGCAAGTCCGCAA
GCAGCAGGCTCTCTGCCAGGAGACGCTCGACTCCATCGCCCGCTGGGAATCGCGTCAAAAGTCGGCCACGCACTG
CGGCAAGTCGCTGTCTTCCAGCACGCCCTCGTGGATGCGAAAGGCCGAGTCCATCAGCAGCTCCGGAAACGGCAG
CATCCTCACCATGGACGCGCTGGAGCACACGCTGGCCAAGAACCCGGAACCCCTGCAGCACTTCTCGGCGCTGAG
GGACTTTTCCGGCGAGAACATCGCCTTCTTGACTAGGGTTCGCGAGTGGAGGGCCACGTATCTGGTTCCCGCGAG
CCGACCTACGACCATGGTCGATGAGAAGAAGCTGGAGACGGATTCGGACGTGTCGACGCTGTCGAGAGAGTGTTT
CGAGGGCGCGCTCCTCATCTACATGGACTTCATCAGCAGTAACAGCGCCGAGTTCCAGGTCAACCTCTCGTCTCA
AGACTTCAAGAACCTTCAGGCCGTCTTCGAGCCGGCAGCCCGAGTCATGTACGGCGACAACGCGAGTCCGGATCC
GGCAACGCCCTTCCAAGAGGCGCCACGAGCGCTGACGAGCGATTCGCATCATCGGATACGATATCGTGGCGATAT
CCCCGATCTCTTCACCGATACCGTCTTTGACGACTCGGAGATGAGCATCAAGTATCTCGTCCTGACCAACACTTG
GCCCAAGTTTATAAAGGAGAGGAGGTCGTTTGATGCCGCCAGCAGCGTCGAGGGTGCCCGGAACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail