Protein ID | Ophcf2|06321 |
Gene name | |
Location | scaffold_07:1945391..1946454 |
Strand | + |
Gene length (bp) | 1063 |
Transcript length (bp) | 1011 |
Coding sequence length (bp) | 1011 |
Protein length (aa) | 337 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 1.1E-24 | 163 | 273 |
PF13602 | ADH_zinc_N_2 | Zinc-binding dehydrogenase | 1.9E-19 | 196 | 333 |
PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 3.1E-06 | 37 | 99 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 21 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06321 MTKMALPNTMKAVQISRNGGTEVLELRHDAPVPKPGPGQVVVRNLFAGINFIDTYFRTGLYPAPSLPLTLGREAA GEVVFSSSSSSGIAVGTRVVYVPIALDAGTYAQYTAVDEDRVVAIPDGVGTDVAAAVFLQGLTAWTLIREAANVQ PDTWTLVHAAAGGVGLLLVQMLRLVGARVIAAAGDADKRELACRNGAGWVVDSRADDLVAKVKEITGGHGVDVIF DGVGKATFDADLDMIAVKGLLISFGNASGAVPPLSLLRLTAKNIKLMRPTLNVYVADRGDLVKYSNELFDLVGSK KINVAIHNVYPLQDVARAHTDIESRKTTGKLLLDCQ* |
Coding | >Ophcf2|06321 ATGACCAAAATGGCCCTCCCAAACACCATGAAAGCGGTTCAAATCAGCCGAAACGGCGGCACAGAAGTCCTCGAG CTCCGTCACGACGCCCCCGTTCCGAAGCCGGGCCCCGGCCAAGTCGTAGTCCGCAACCTCTTCGCGGGCATCAAC TTCATAGACACCTACTTCCGCACAGGCCTCTATCCGGCTCCCAGCCTCCCGCTGACACTCGGTCGTGAAGCCGCC GGCGAGGTCGTCTTCAGCTCCTCTTCGTCCAGCGGTATCGCCGTCGGCACGCGCGTCGTCTACGTGCCCATTGCA CTCGACGCTGGCACGTACGCGCAGTACACGGCCGTGGACGAGGACCGCGTCGTCGCCATTCCCGACGGTGTAGGC ACTGATGTTGCCGCTGCCGTCTTCCTTCAGGGCCTCACTGCCTGGACTTTGATCCGTGAGGCTGCTAATGTTCAG CCTGATACCTGGACTTTGGTTCACGCAGCTGCTGGCGGCGTTGGCTTGCTGCTCGTCCAGATGCTGCGTCTCGTC GGCGCCCGTGTCATTGCCGCCGCTGGAGATGCTGACAAGAGGGAGCTAGCGTGTCGTAATGGCGCTGGCTGGGTC GTCGATTCGCGTGCTGACGACCTCGTCGCCAAGGTCAAGGAGATCACGGGTGGTCATGGCGTCGATGTCATCTTC GACGGCGTTGGCAAGGCTACTTTCGATGCCGACTTGGACATGATTGCTGTCAAGGGTCTCCTCATCTCCTTTGGC AACGCTTCCGGCGCTGTGCCGCCACTGAGCCTCTTGCGGCTCACGGCCAAGAACATCAAGCTCATGAGGCCCACG CTCAACGTCTACGTCGCAGACCGCGGCGACCTGGTCAAGTACTCAAACGAGCTATTCGACCTCGTAGGTTCGAAA AAGATCAACGTCGCCATTCACAACGTCTATCCCCTCCAGGACGTGGCCAGGGCTCACACCGATATCGAGAGCAGA AAGACGACGGGAAAGCTGTTGCTAGATTGCCAATAG |
Transcript | >Ophcf2|06321 ATGACCAAAATGGCCCTCCCAAACACCATGAAAGCGGTTCAAATCAGCCGAAACGGCGGCACAGAAGTCCTCGAG CTCCGTCACGACGCCCCCGTTCCGAAGCCGGGCCCCGGCCAAGTCGTAGTCCGCAACCTCTTCGCGGGCATCAAC TTCATAGACACCTACTTCCGCACAGGCCTCTATCCGGCTCCCAGCCTCCCGCTGACACTCGGTCGTGAAGCCGCC GGCGAGGTCGTCTTCAGCTCCTCTTCGTCCAGCGGTATCGCCGTCGGCACGCGCGTCGTCTACGTGCCCATTGCA CTCGACGCTGGCACGTACGCGCAGTACACGGCCGTGGACGAGGACCGCGTCGTCGCCATTCCCGACGGTGTAGGC ACTGATGTTGCCGCTGCCGTCTTCCTTCAGGGCCTCACTGCCTGGACTTTGATCCGTGAGGCTGCTAATGTTCAG CCTGATACCTGGACTTTGGTTCACGCAGCTGCTGGCGGCGTTGGCTTGCTGCTCGTCCAGATGCTGCGTCTCGTC GGCGCCCGTGTCATTGCCGCCGCTGGAGATGCTGACAAGAGGGAGCTAGCGTGTCGTAATGGCGCTGGCTGGGTC GTCGATTCGCGTGCTGACGACCTCGTCGCCAAGGTCAAGGAGATCACGGGTGGTCATGGCGTCGATGTCATCTTC GACGGCGTTGGCAAGGCTACTTTCGATGCCGACTTGGACATGATTGCTGTCAAGGGTCTCCTCATCTCCTTTGGC AACGCTTCCGGCGCTGTGCCGCCACTGAGCCTCTTGCGGCTCACGGCCAAGAACATCAAGCTCATGAGGCCCACG CTCAACGTCTACGTCGCAGACCGCGGCGACCTGGTCAAGTACTCAAACGAGCTATTCGACCTCGTAGGTTCGAAA AAGATCAACGTCGCCATTCACAACGTCTATCCCCTCCAGGACGTGGCCAGGGCTCACACCGATATCGAGAGCAGA AAGACGACGGGAAAGCTGTTGCTAGATTGCCAATAG |
Gene | >Ophcf2|06321 ATGACCAAAATGGCCCTCCCAAACACCATGAAAGCGGTTCAAATCAGCCGAAACGGCGGCACAGAAGTCCTCGAG CTCCGTCACGACGCCCCCGTTCCGAAGCCGGGCCCCGGCCAAGTCGTAGTCCGCAACCTCTTCGCGGGCATCAAC TTCATAGACACCTACTTCCGCACAGGCCTCTATCCGGCTCCCAGCCTCCCGCTGACACTCGGTCGTGAAGCCGCC GGCGAGGTCGTCTTCAGCTCCTCTTCGTCCAGCGGTATCGCCGTCGGCACGCGCGTCGTCTACGTGCCCATTGCA CTCGACGCTGGCACGTACGCGCAGTACACGGCCGTGGACGAGGACCGCGTCGTCGCCATTCCCGACGGTGTAGGC ACTGATGTTGCCGCTGCCGTCTTCCTTCAGGGCCTCACTGCCTGGACTTTGATCCGTGAGGCTGCTAATGTTCAG CCTGATACCTGGACTTTGGTTCACGCAGCTGCTGGCGGCGTTGGCTTGCTGCTCGTCCAGATGCTGCGTCTCGTC GGCGCCCGTGTCATTGCCGCCGCTGGAGATGCTGACAAGAGGGAGCTAGCGTGTCGTAATGGCGCTGGCTGGGTC GTCGATTCGCGTGCTGACGACCTCGTCGCCAAGGTCAAGGAGATCACGGGTGGTCATGGCGTCGATGTCATCTTC GACGGCGTTGGCAAGGCTACTTTCGATGCCGACTTGGACATGATTGCTGTCAAGGGTCTCCTCATCTCCTTTGGC AACGCTGTTAGTTGGCCTTTCTCTACCCATGCGATGTACCTATCGCTGACGATAGAAGTCCGGCGCTGTGCCGCC ACTGAGCCTCTTGCGGCTCACGGCCAAGAACATCAAGCTCATGAGGCCCACGCTCAACGTCTACGTCGCAGACCG CGGCGACCTGGTCAAGTACTCAAACGAGCTATTCGACCTCGTAGGTTCGAAAAAGATCAACGTCGCCATTCACAA CGTCTATCCCCTCCAGGACGTGGCCAGGGCTCACACCGATATCGAGAGCAGAAAGACGACGGGAAAGCTGTTGCT AGATTGCCAATAG |