Protein ID | Ophcf2|06320 |
Gene name | |
Location | scaffold_07:1943424..1944973 |
Strand | + |
Gene length (bp) | 1549 |
Transcript length (bp) | 1479 |
Coding sequence length (bp) | 1479 |
Protein length (aa) | 493 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 5.1E-20 | 28 | 182 |
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 3.0E-10 | 249 | 374 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005615 | extracellular space | Yes |
GO:0090729 | toxin activity | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.552 | 0.2634 | 0.5182 | 0.1264 | 0.2718 | 0.1159 | 0.1408 | 0.2259 | 0.2779 | 0.1016 |
Orthofinder run ID | 4 |
Orthogroup | 4754 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06320 MGALYSEGLEKLRRNGTITNQQFWDGCSLYSHSKRSSAGYSQYISASRDPFSALYLEMSERRLKKELENQPIYLY KIHADHAIFELNASLGVVNPHPQEPEWVSVGLIPWVQVMGWYTVNLPEVSSVFRSDMTIKKNAVFHPNSAYNASM YEKQRTTVPQPQLAGFPRTFSAWEREPWKPYKNKPTTQLLGEFVWHHVCERTYACYRLHRPLLRATSLTAEAEDS PPAHEADAAVRDNPPKIIFIGHFLWPDEVKKQNGFLTAADRAYRTKAAPPEAYTLKQHLDVYNPNRTTYFIQGSE NFGTAAEWAARSASRHTNGFEGVVYAVHATPNMIDVGLTVGNYYGDLNPTAQRFAIAGGVKWSQVRGWVQIPANY TRIPAAKIGSRSDVRERLDEAFKDDISLFQSNPDYDKKFDKYTANKRSQKQLFSRSNPEKMLKDFMTLTASAYGW TGSFPLFEVGHLKTATDSKRAKQTNRSPSFRKPSPPSRSLAL* |
Coding | >Ophcf2|06320 ATGGGCGCCCTCTATTCCGAAGGCTTGGAGAAGCTCAGACGAAACGGAACCATCACCAACCAACAGTTTTGGGAC GGATGCAGCCTGTACTCTCACTCGAAACGAAGCTCAGCCGGATACTCGCAATACATCTCAGCGTCGCGAGACCCC TTTTCTGCCCTATACCTCGAGATGTCGGAGCGACGTCTCAAGAAGGAACTGGAAAATCAACCCATCTATTTGTAC AAGATTCACGCCGACCACGCCATCTTTGAGCTGAACGCGTCACTAGGCGTGGTAAATCCTCACCCTCAAGAGCCC GAGTGGGTTTCCGTTGGCCTCATTCCGTGGGTGCAAGTCATGGGATGGTACACGGTGAATCTTCCCGAGGTCTCA TCCGTCTTTAGATCGGATATGACCATCAAAAAGAACGCCGTCTTCCATCCAAACTCGGCCTACAACGCCTCCATG TACGAGAAACAGCGCACAACCGTCCCGCAGCCCCAACTGGCCGGCTTTCCCCGTACCTTTTCAGCCTGGGAAAGG GAGCCGTGGAAGCCGTACAAGAACAAGCCCACGACGCAGCTCCTTGGTGAATTCGTCTGGCATCACGTCTGCGAA AGGACCTACGCCTGCTACAGGCTACACCGACCCCTTCTGCGAGCAACCTCACTGACAGCCGAGGCCGAAGACTCG CCGCCAGCCCACGAGGCGGACGCAGCCGTAAGGGATAATCCCCCCAAGATCATATTCATCGGCCACTTTCTCTGG CCAGACGAGGTCAAGAAACAAAACGGCTTCCTCACCGCAGCCGATCGCGCTTATCGGACCAAGGCCGCTCCCCCC GAGGCCTACACCTTGAAGCAGCATCTAGACGTCTACAACCCAAATCGCACCACCTATTTCATCCAGGGATCTGAG AATTTCGGCACCGCGGCGGAATGGGCGGCTCGAAGCGCCTCCCGTCACACGAATGGGTTTGAAGGCGTCGTCTAC GCCGTTCACGCCACCCCCAACATGATAGACGTCGGTCTCACCGTAGGCAACTATTACGGTGATCTGAATCCTACA GCCCAACGGTTCGCCATTGCCGGAGGCGTCAAGTGGTCGCAAGTCCGAGGCTGGGTCCAGATTCCGGCCAACTAC ACCAGAATCCCCGCTGCCAAAATCGGGTCAAGATCCGACGTTCGGGAACGGCTGGATGAAGCCTTCAAAGACGAC ATCTCGCTCTTCCAGTCGAACCCAGACTACGACAAAAAGTTCGACAAATATACGGCCAACAAGAGATCCCAGAAG CAGCTCTTTTCCCGCTCCAATCCTGAAAAGATGCTCAAGGACTTTATGACTCTGACGGCAAGTGCTTACGGCTGG ACCGGCAGCTTCCCACTCTTCGAGGTCGGCCATCTTAAGACAGCTACCGACTCGAAAAGGGCCAAGCAGACTAAT CGATCTCCCTCCTTCCGGAAGCCGTCGCCTCCATCGCGATCCCTGGCTCTCTAG |
Transcript | >Ophcf2|06320 ATGGGCGCCCTCTATTCCGAAGGCTTGGAGAAGCTCAGACGAAACGGAACCATCACCAACCAACAGTTTTGGGAC GGATGCAGCCTGTACTCTCACTCGAAACGAAGCTCAGCCGGATACTCGCAATACATCTCAGCGTCGCGAGACCCC TTTTCTGCCCTATACCTCGAGATGTCGGAGCGACGTCTCAAGAAGGAACTGGAAAATCAACCCATCTATTTGTAC AAGATTCACGCCGACCACGCCATCTTTGAGCTGAACGCGTCACTAGGCGTGGTAAATCCTCACCCTCAAGAGCCC GAGTGGGTTTCCGTTGGCCTCATTCCGTGGGTGCAAGTCATGGGATGGTACACGGTGAATCTTCCCGAGGTCTCA TCCGTCTTTAGATCGGATATGACCATCAAAAAGAACGCCGTCTTCCATCCAAACTCGGCCTACAACGCCTCCATG TACGAGAAACAGCGCACAACCGTCCCGCAGCCCCAACTGGCCGGCTTTCCCCGTACCTTTTCAGCCTGGGAAAGG GAGCCGTGGAAGCCGTACAAGAACAAGCCCACGACGCAGCTCCTTGGTGAATTCGTCTGGCATCACGTCTGCGAA AGGACCTACGCCTGCTACAGGCTACACCGACCCCTTCTGCGAGCAACCTCACTGACAGCCGAGGCCGAAGACTCG CCGCCAGCCCACGAGGCGGACGCAGCCGTAAGGGATAATCCCCCCAAGATCATATTCATCGGCCACTTTCTCTGG CCAGACGAGGTCAAGAAACAAAACGGCTTCCTCACCGCAGCCGATCGCGCTTATCGGACCAAGGCCGCTCCCCCC GAGGCCTACACCTTGAAGCAGCATCTAGACGTCTACAACCCAAATCGCACCACCTATTTCATCCAGGGATCTGAG AATTTCGGCACCGCGGCGGAATGGGCGGCTCGAAGCGCCTCCCGTCACACGAATGGGTTTGAAGGCGTCGTCTAC GCCGTTCACGCCACCCCCAACATGATAGACGTCGGTCTCACCGTAGGCAACTATTACGGTGATCTGAATCCTACA GCCCAACGGTTCGCCATTGCCGGAGGCGTCAAGTGGTCGCAAGTCCGAGGCTGGGTCCAGATTCCGGCCAACTAC ACCAGAATCCCCGCTGCCAAAATCGGGTCAAGATCCGACGTTCGGGAACGGCTGGATGAAGCCTTCAAAGACGAC ATCTCGCTCTTCCAGTCGAACCCAGACTACGACAAAAAGTTCGACAAATATACGGCCAACAAGAGATCCCAGAAG CAGCTCTTTTCCCGCTCCAATCCTGAAAAGATGCTCAAGGACTTTATGACTCTGACGGCAAGTGCTTACGGCTGG ACCGGCAGCTTCCCACTCTTCGAGGTCGGCCATCTTAAGACAGCTACCGACTCGAAAAGGGCCAAGCAGACTAAT CGATCTCCCTCCTTCCGGAAGCCGTCGCCTCCATCGCGATCCCTGGCTCTCTAG |
Gene | >Ophcf2|06320 ATGGGCGCCCTCTATTCCGAAGGCTTGGAGAAGCTCAGACGAAACGGAACCATCACCAACCAACAGTTTTGGGAC GGATGCAGCCTGTACTCTCACTCGAAACGAAGCTCAGCCGGATACTCGCAATACATCTCAGCGTCGCGAGACCCC TTTTCTGCCCTATACCTCGAGATGTCGGAGCGACGTCTCAAGAAGGAACTGGAAAATCAACCCATCTATTTGTAC AAGATTCACGCCGACCACGCCATCTTTGAGCTGAACGCGTCACTAGGCGTGGTAAATCCTCACCCTCAAGAGCCC GAGTGGGTTTCCGTTGGCCTCATTCCGTGGGTGCAAGTCATGGGATGGTACACGGTGAATCTTCCCGAGGTCTCA TCCGTCTTTAGATCGGATATGACCATCAAAAAGAACGCCGTCTTCCATCCAAACTCGGCCTACAACGCCTCCATG TACGAGAAACAGCGCACAACCGTCCCGCAGCCCCAACTGGCCGGCTTTCCCCGTACCTTTTCAGCCTGGGAAAGG GAGCCGTGGAAGCCGTACAAGAACAAGCCCACGACGCAGCTCCTTGGTGAATTCGTCTGGCATCACGTCTGCGAA AGGACCTACGCCTGCTACAGGCTACACCGACCCCTTCTGCGAGCAACCTCACTGACAGCCGAGGCCGAAGACTCG CCGCCAGCCCACGAGGCGGACGCAGCCGTAAGGGATAATCCCCCCAAGATCATATTCATCGGCCACTTTCTCTGG CCAGACGAGGTCAAGAAACAAAACGGCTTCCTCACCGCAGCCGATCGCGCTTATCGGACCAAGGCCGCTCCCCCC GAGGCCTACACCTTGAAGCAGCATCTAGACGTCTACAACCCAAATCGCACCACCTATTTCATCCAGGGATCTGAG AATTTCGGCACCGCGGCGGAATGGGCGGCTCGAAGCGCCTCCCGTCACACGAATGGGTTTGAAGGCGTCGTCTAC GCCGTTCACGCCACCCCCAACATGATAGACGTCGGTCTCACCGTAGGCAACTATTACGGTGATCTGAATCCTACA GCCCAACGGTTCGCCATTGCCGGAGGCGTCAAGTGGTCGCAAGTCCGAGGCTGGGTCCAGATTCCGGCCAACTAC ACCAGAATCCCCGCTGCCAAAATCGGGTCAAGATCCGACGTTCGGGAACGGCTGGATGAAGCCTTCAAAGACGAC ATCTCGCTCTTCCAGTCGAACCCAGACTACGACAAAAAGTTCGACAAATATACGGCCAACAAGAGATCCCAGAAG CAGCTCTTTTCCCGCTCCAATCCTGAAAAGATGCTCAAGGACTTTATGACTCTGACGGCAAGTGCTTACGGCTGG ACCGGCAGCTTCCCACTCTTCGAGGTCGGCCATCTTAAGACAGCTACCGACTCGAAAAGGGCCAAGCAGACTAAT CGAGTGCCTCAACCCCATGAGCCAGACACGCTAGCCAGGATCCGCGGATTCATGGAAGCTCATCCCTTGGCAGTC TCCCTCCTTCCGGAAGCCGTCGCCTCCATCGCGATCCCTGGCTCTCTAG |