Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06310
Gene name
Locationscaffold_07:1911844..1913502
Strand-
Gene length (bp)1658
Transcript length (bp)702
Coding sequence length (bp)702
Protein length (aa) 234

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 157 179 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06310
MDDPRDRLGLQCPPTSVFYICKDTPKRFLGCCTIDACQRGGDCPLPNIESATFNASRYQDIPPQECDSASALWYT
CKFTRPPFLGCCRQNPCTQTSGCPAGALGVGVLNRDPSLAASLLPMSATTTTTTRRTATPTTSKTPSTTPSGDAG
SISKGTAAGISIGVSAALISLLSALVVFLYRRKKRKSSKDDNIRSTTLETSARTSPDQSPSYLNHRVSPMSGCTS
PSPPARVS*
Coding >Ophcf2|06310
ATGGACGACCCCCGCGATAGATTAGGCCTCCAATGCCCCCCAACCAGCGTCTTCTACATCTGCAAAGACACCCCC
AAGCGCTTCCTTGGCTGCTGCACCATCGACGCCTGCCAACGAGGCGGCGACTGTCCGCTCCCCAACATCGAGTCC
GCCACTTTCAACGCCTCCCGCTACCAAGACATCCCTCCGCAGGAGTGTGATTCCGCCTCGGCCCTATGGTATACC
TGCAAGTTCACCAGGCCGCCTTTCCTCGGCTGCTGCCGACAGAATCCGTGTACGCAGACGAGTGGTTGTCCGGCC
GGAGCGTTGGGCGTCGGCGTCTTGAATAGGGATCCTTCTCTTGCGGCTTCCTTGCTTCCCATGTCTGCGACGACG
ACGACGACGACGAGGAGGACTGCCACTCCTACAACCAGCAAGACTCCCTCGACGACCCCTTCCGGAGACGCGGGC
AGCATCTCCAAAGGAACAGCAGCAGGCATCAGCATCGGCGTCTCGGCCGCTCTCATAAGCCTCCTTTCCGCCCTC
GTCGTCTTCCTCTACCGACGCAAGAAGCGTAAATCCAGCAAGGATGACAACATACGAAGCACGACGCTCGAGACG
TCAGCCCGCACCAGCCCGGACCAGTCCCCGTCTTACCTCAACCACCGGGTCTCTCCCATGAGCGGCTGCACGTCT
CCGTCGCCACCCGCGCGGGTTAGCTAA
Transcript >Ophcf2|06310
ATGGACGACCCCCGCGATAGATTAGGCCTCCAATGCCCCCCAACCAGCGTCTTCTACATCTGCAAAGACACCCCC
AAGCGCTTCCTTGGCTGCTGCACCATCGACGCCTGCCAACGAGGCGGCGACTGTCCGCTCCCCAACATCGAGTCC
GCCACTTTCAACGCCTCCCGCTACCAAGACATCCCTCCGCAGGAGTGTGATTCCGCCTCGGCCCTATGGTATACC
TGCAAGTTCACCAGGCCGCCTTTCCTCGGCTGCTGCCGACAGAATCCGTGTACGCAGACGAGTGGTTGTCCGGCC
GGAGCGTTGGGCGTCGGCGTCTTGAATAGGGATCCTTCTCTTGCGGCTTCCTTGCTTCCCATGTCTGCGACGACG
ACGACGACGACGAGGAGGACTGCCACTCCTACAACCAGCAAGACTCCCTCGACGACCCCTTCCGGAGACGCGGGC
AGCATCTCCAAAGGAACAGCAGCAGGCATCAGCATCGGCGTCTCGGCCGCTCTCATAAGCCTCCTTTCCGCCCTC
GTCGTCTTCCTCTACCGACGCAAGAAGCGTAAATCCAGCAAGGATGACAACATACGAAGCACGACGCTCGAGACG
TCAGCCCGCACCAGCCCGGACCAGTCCCCGTCTTACCTCAACCACCGGGTCTCTCCCATGAGCGGCTGCACGTCT
CCGTCGCCACCCGCGCGGGTTAGCTAA
Gene >Ophcf2|06310
ATGGACGACCCCCGCGATAGATTAGGCCTCCAATGCCCCCCAACCAGCGTCTTCTACATCTGCAAAGACACCCCC
AAGCGCTTCCTTGGCTGCTGCACCATCGACGCCTGCCAACGAGGCGGCGACTGTCCGCTCCCCAACATCGAGTCC
GCCACTTTCAACGCCTCCCGCTACCAAGACATCCCTCCGCAGGAGTGTGATTCCGCCTCGGCCCTATGGTATACC
TGCAAGTTCACCAGGCCGCCTTTCCTCGGCTGCTGCCGACAGAATCCGTGTACGCAGACGAGTGGTTGTCCGGCC
GGAGCGTTGGGCGTCGGCGTCTTGAATAGGGATCCTTCTCTTGCGGCTTCCTTGCTTCCCATGTCTGCGACGACG
ACGACGACGACGAGGAGGACTGCCACTCCTACAACCAGCAAGACTCCCTCGACGACCCCTTCCGGAGACGCGGGC
AGCATCTCCAAAGGAACAGCAGCAGGCATCAGCATCGGCGTCTCGGCCGCTCTCATAAGCCTCCTTTCCGCCCTC
GTCGTCTTCCTCTACCGACGCAAGAAGCGTAAATCCAGCAAGGATGACAACATACGAAGCACGACGCTCGAGACG
TCAGCCCGCACCAGCCCGGACCAGTCCCCGTCTTACCTCAACCACCGGGTCTCTCCCATGAGCGGCTGCACGTCT
CCGTCGCCACCCGCGCGGTTCGCCTCCATCATCGGCCCGGATGATACCTGCACCGTTTCCGAGATGGATGCTTCG
ACGGAGAAGACTCGGCCGGTTGAGTTGGAGGATCCGCGGACGTGGATGAGGAGGGGGGTGGGGGCTGATGAATGT
TGTATATGTTTGGGGGGGGGGAATGATTGTATCTATAATCGATATTGGGAGGGTTGATATCTCTTAGCCGTGGCA
CAGAGGCCTTCTCTCTTATACGACGGGCTTCTGTTCGCCTGTTGCACCGCATACGATAGATGCGCGAGAAACAAG
GCAAAGAAGGTCGCGAACCATTCGACAGCCACGGGATCCGTGCACGCATATGTCGGTGGCTATAGGGCATAAAGA
GCAATTAGCTAGTACGAGGCAGTGGCTAGGATAGCCCTCCCTCGTAATATTTACGGACTAGGGTAATTAGCTACC
GTAAGACAATAGCTAGGACAGCCTTCCCTAGTAGAAATAATTAGGAATATACCTATAGAAGAACTAGGCTATAAG
AAAGGATTAGAATTCTCCCTTAGATAGTATTAGATAATTAAGATTATAACTCTCTTTATATCTCTCATATTTTTC
TACTCTATATCTTATAATTACTATTATTTAGTTATTCTATTATAATCCCTATTAGATTTACTTATAGCTATTTAA
TAGTTATAAGCCTAGGAGGCTATAAGAATAATTATAATAACTTATAACTTTTCTATAATAAATTATTATTAGTTA
TTAAATTAATAATAAACCTTTTATTATTAGAATAATACTAATATTTATAAAAATATTAATAGAATTAAATACTTT
ATAAGCTAAGCTTACTAACCTTAAAGACTAAGATATATAAAAAGAGAAGTAATAAGTAAGATTAACTCTCTAGCC
TATAATATAATTTTCTTAGACTATAAAAAGAACTAAGAAAGGTAATTACTCTTACCTTTTAAATGTATCCTAGGG
TTAGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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