Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06289
Gene name
Locationscaffold_07:1801594..1802592
Strand+
Gene length (bp)998
Transcript length (bp)819
Coding sequence length (bp)819
Protein length (aa) 273

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01165 Ribosomal_S21 Ribosomal protein S21 2.7E-06 208 253

GO

GO Term Description Terminal node
GO:0005840 ribosome Yes
GO:0006412 translation Yes
GO:0003735 structural constituent of ribosome Yes
GO:0009058 biosynthetic process No
GO:0044238 primary metabolic process No
GO:0019538 protein metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0043604 amide biosynthetic process No
GO:0043170 macromolecule metabolic process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0044260 cellular macromolecule metabolic process No
GO:0005575 cellular_component No
GO:1901576 organic substance biosynthetic process No
GO:0008152 metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0009987 cellular process No
GO:0110165 cellular anatomical entity No
GO:0044237 cellular metabolic process No
GO:0071704 organic substance metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0043229 intracellular organelle No
GO:0034645 cellular macromolecule biosynthetic process No
GO:0043043 peptide biosynthetic process No
GO:0003674 molecular_function No
GO:0006518 peptide metabolic process No
GO:0043603 cellular amide metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0008150 biological_process No
GO:0043226 organelle No
GO:0043228 non-membrane-bounded organelle No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0043232 intracellular non-membrane-bounded organelle No
GO:0005198 structural molecule activity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion Mitochondrial transit peptide 0.1563 0.1364 0.1129 0.0529 0.9208 0.1255 0.0365 0.0175 0.0282 0.1415

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup4446
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3789
Ophiocordyceps australis map64 (Brazil) OphauB2|536
Ophiocordyceps camponoti-floridani Ophcf2|06289 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|2613
Ophiocordyceps kimflemingae Ophio5|7300
Ophiocordyceps subramaniannii Hirsu2|9215

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06289
MLFRADRLSLPVSRAELPGCTSSLITTSSTANGTSGEIRRRNAVQGAGLAPSSPNRSSSIILSPTTTSHAHSSTS
PDRFIALRHRYHIQQDTASKPAPTSYLPALEWWDKSTDTEQSSAGTISGKPAPPIKDQIPLFPASPDLPPGPPPA
STSSDKNQDASSSTKPEHAYDANLKDPGQYPRIHTRPVTGRTVFVIPSRIGNNTAQTVSSAFRTISRLVRDMGLR
AKSREQKKHMRPGLKRKMLRSKRWRARFKEAFKAATSRALELKKQGW*
Coding >Ophcf2|06289
ATGTTGTTCCGAGCCGACCGCCTGTCTCTACCAGTCTCCAGAGCAGAGCTTCCAGGTTGCACGTCCAGCCTTATA
ACGACATCATCGACAGCAAATGGAACATCTGGCGAGATCCGGCGCCGCAATGCTGTTCAAGGCGCCGGCCTCGCT
CCTTCGTCCCCCAACCGCTCGAGCTCTATCATCCTCTCTCCCACGACAACGTCGCACGCCCACAGCTCAACGTCC
CCCGACCGTTTCATCGCGCTCCGACACCGCTACCACATCCAGCAAGACACGGCGTCTAAGCCCGCTCCAACTTCC
TACCTTCCCGCCCTTGAATGGTGGGACAAGTCTACCGATACCGAACAGTCTTCGGCTGGTACCATCTCCGGAAAA
CCTGCTCCTCCCATCAAGGATCAAATTCCCCTTTTCCCTGCGTCTCCTGATCTGCCGCCGGGACCGCCGCCAGCT
TCTACAAGTTCCGACAAGAACCAAGACGCATCTTCATCGACCAAGCCGGAACACGCCTACGACGCCAATCTAAAG
GATCCAGGGCAATACCCAAGGATCCACACAAGACCAGTCACCGGCCGAACCGTCTTCGTCATCCCAAGCCGAATA
GGGAACAACACGGCACAAACCGTCTCGTCGGCCTTTCGTACGATTTCCAGGCTTGTTCGCGACATGGGGCTTCGC
GCCAAGTCCAGGGAACAAAAGAAGCACATGCGCCCCGGCTTGAAGAGGAAGATGTTAAGGAGCAAGCGGTGGCGT
GCCAGGTTCAAGGAGGCCTTCAAGGCTGCTACTAGCAGGGCGCTGGAACTGAAGAAGCAGGGATGGTAG
Transcript >Ophcf2|06289
ATGTTGTTCCGAGCCGACCGCCTGTCTCTACCAGTCTCCAGAGCAGAGCTTCCAGGTTGCACGTCCAGCCTTATA
ACGACATCATCGACAGCAAATGGAACATCTGGCGAGATCCGGCGCCGCAATGCTGTTCAAGGCGCCGGCCTCGCT
CCTTCGTCCCCCAACCGCTCGAGCTCTATCATCCTCTCTCCCACGACAACGTCGCACGCCCACAGCTCAACGTCC
CCCGACCGTTTCATCGCGCTCCGACACCGCTACCACATCCAGCAAGACACGGCGTCTAAGCCCGCTCCAACTTCC
TACCTTCCCGCCCTTGAATGGTGGGACAAGTCTACCGATACCGAACAGTCTTCGGCTGGTACCATCTCCGGAAAA
CCTGCTCCTCCCATCAAGGATCAAATTCCCCTTTTCCCTGCGTCTCCTGATCTGCCGCCGGGACCGCCGCCAGCT
TCTACAAGTTCCGACAAGAACCAAGACGCATCTTCATCGACCAAGCCGGAACACGCCTACGACGCCAATCTAAAG
GATCCAGGGCAATACCCAAGGATCCACACAAGACCAGTCACCGGCCGAACCGTCTTCGTCATCCCAAGCCGAATA
GGGAACAACACGGCACAAACCGTCTCGTCGGCCTTTCGTACGATTTCCAGGCTTGTTCGCGACATGGGGCTTCGC
GCCAAGTCCAGGGAACAAAAGAAGCACATGCGCCCCGGCTTGAAGAGGAAGATGTTAAGGAGCAAGCGGTGGCGT
GCCAGGTTCAAGGAGGCCTTCAAGGCTGCTACTAGCAGGGCGCTGGAACTGAAGAAGCAGGGATGGTAG
Gene >Ophcf2|06289
ATGTTGTTCCGAGCCGACCGCCTGTCTCTACCAGTCTCCAGAGCAGAGCTTCCAGGTTGCACGTCCAGCCTTATA
ACGACATCATCGACAGCAAATGTATCTGCAGCGTCCTTTCCTCACCCTTTTACTGCTGCTTACTCGGTTATAGGG
AACATCTGGCGAGATCCGGCGCCGCAATGCTGTTCAAGGCGCCGGCCTCGCTCCTTCGTCCCCCAACCGCTCGAG
CTCTATCATCCTCTCTCCCACGACAACGTCGCACGCCCACAGCTCAACGTCCCCCGACCGTTTCATCGCGCTCCG
ACACCGCTACCAGTAACCGAGTCAACCCTCTCGTCGCTGGAGAATTCGTAGTCCCCGAGCCTCGTGAAGCGCCCA
GCATCCAGCAAGACACGGCGTCTAAGCCCGCTCCAACTTCCTACCTTCCCGCCCTTGAATGGTGGGACAAGTCTA
CCGATACCGAACAGTCTTCGGCTGGTACCATCTCCGGAAAACCTGCTCCTCCCATCAAGGATCAAATTCCCCTTT
TCCCTGCGTCTCCTGATCTGCCGCCGGGACCGCCGCCAGCTTCTACAAGTTCCGACAAGAACCAAGACGCATCTT
CATCGACCAAGCCGGAACACGCCTACGACGCCAATCTAAAGGATCCAGGGCAAGTAGCTGCTCTTTGTCAAGAAC
TTTACGAGACGACCTCACCTGAAAGTCTCGATGCTCGTCAGTACCCAAGGATCCACACAAGACCAGTCACCGGCC
GAACCGTCTTCGTCATCCCAAGCCGAATAGGGAACAACACGGCACAAACCGTCTCGTCGGCCTTTCGTACGATTT
CCAGGCTTGTTCGCGACATGGGGCTTCGCGCCAAGTCCAGGGAACAAAAGAAGCACATGCGCCCCGGCTTGAAGA
GGAAGATGTTAAGGAGCAAGCGGTGGCGTGCCAGGTTCAAGGAGGCCTTCAAGGCTGCTACTAGCAGGGCGCTGG
AACTGAAGAAGCAGGGATGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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