Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06256
Gene name
Locationscaffold_07:1702751..1704455
Strand+
Gene length (bp)1704
Transcript length (bp)1488
Coding sequence length (bp)1488
Protein length (aa) 496

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01169 UPF0016 Uncharacterized protein family UPF0016 1.9E-20 248 321
PF01169 UPF0016 Uncharacterized protein family UPF0016 2.0E-18 412 484

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 31 0.45

Transmembrane Domains

Domain # Start End Length
1 276 298 22
2 308 325 17
3 397 419 22
4 439 461 22
5 468 490 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06256
MRAHTQPTQPTLSPPLLLLLLLPLLVSSLAGSLKPEPATVSHARVEPRHYVPTKEAPVDGRDGKPHTGPFVEKTD
SDRTGLPPLRGRPEDPTVVDGIKIPKSNDGVMFDRNRERPLEGTTGTEGGVSEKDKARKEKEGQTGERTVGQPKS
PKEQPRLPDSEEKKLQTNGDDRYRPAVEDSSSSGYTGLGKPADIPDIPREDAMPPPKSKTSEAEVPLTGSPRKTS
HKSSDLHADDEDGIIRPFHSFVLSLTMILVSEVGDKTFLVAALMAMKHDRLLVFSAAFGALLVMTVLSALLGHAV
PTLIPKRLTSLLAAILFFVFGLKLLREGLNMDPDEGVAAEMQEVEQELADKEKEQHGHPYRQHSLSPHALEMGLA
PRNPPRLPGQSSGRSIDDFVHGVGNLCSLLLSPAWVQTFAMTFLGEWGDRSQIATIAMAAGQDYAWVTLGAMCGH
AVCTGVAVVGGRAIAGRVSLKVVTVGGALAFLLFSIVYLIEALHG*
Coding >Ophcf2|06256
ATGCGCGCTCACACGCAGCCGACGCAGCCGACGCTCTCGCCGCCGCTGCTGCTGCTGCTGCTGCTACCGCTCCTG
GTCTCCTCGCTGGCTGGAAGTCTGAAACCCGAGCCGGCTACTGTCAGCCACGCCCGCGTCGAGCCTCGTCATTAC
GTACCGACAAAGGAGGCTCCCGTCGATGGCAGAGACGGGAAGCCACATACAGGCCCCTTTGTCGAAAAGACGGAT
TCGGACAGGACAGGCTTGCCCCCTCTCCGGGGCCGACCCGAGGATCCCACTGTCGTGGACGGCATCAAAATTCCA
AAGTCAAATGACGGCGTCATGTTTGATAGGAACCGCGAGCGTCCCCTAGAGGGCACCACCGGCACCGAGGGCGGC
GTCTCCGAAAAGGACAAGGCTCGCAAGGAAAAGGAGGGCCAGACCGGGGAGCGCACCGTCGGACAGCCCAAGTCA
CCCAAGGAGCAGCCCCGGCTACCAGACAGCGAGGAGAAGAAGCTGCAAACGAATGGCGACGACAGGTACAGGCCT
GCAGTGGAGGACAGCTCATCAAGCGGCTACACGGGGCTGGGGAAACCCGCAGACATACCCGACATCCCCCGCGAA
GACGCAATGCCTCCACCCAAGTCCAAGACCAGCGAAGCAGAAGTGCCCCTAACAGGTTCGCCACGCAAGACGAGC
CACAAAAGCAGCGACCTACACGCCGACGACGAAGACGGCATCATCCGACCCTTCCACTCCTTCGTCCTCTCCCTG
ACCATGATCCTGGTATCCGAGGTAGGCGACAAGACATTCCTGGTAGCAGCTCTCATGGCGATGAAGCACGATCGC
CTCCTCGTCTTCTCCGCCGCCTTTGGCGCCCTCCTCGTCATGACGGTCCTATCAGCGCTACTCGGGCACGCCGTC
CCGACGCTGATACCTAAGCGGCTCACCAGCCTCCTCGCCGCCATCCTCTTCTTCGTCTTCGGCCTCAAGCTCCTC
CGCGAAGGTCTGAACATGGATCCCGACGAGGGCGTCGCCGCCGAGATGCAAGAAGTAGAACAAGAGCTCGCCGAC
AAGGAAAAAGAACAACACGGCCATCCCTACCGTCAACATTCCCTCTCACCACACGCCCTAGAAATGGGCCTCGCC
CCCCGAAACCCCCCGCGGCTCCCAGGCCAAAGCAGCGGCCGCTCGATAGACGACTTCGTCCACGGCGTCGGAAAC
CTTTGCTCCCTCCTCCTCAGCCCAGCCTGGGTGCAGACCTTTGCCATGACCTTCCTGGGCGAGTGGGGTGACCGC
AGTCAGATCGCGACGATTGCAATGGCGGCTGGCCAGGATTACGCCTGGGTTACGCTGGGGGCTATGTGCGGTCAT
GCTGTTTGCACCGGCGTTGCCGTCGTGGGCGGGAGGGCTATAGCCGGACGCGTCAGCCTTAAAGTCGTTACCGTC
GGCGGTGCCCTCGCCTTCCTCCTCTTCTCCATCGTCTACCTCATCGAAGCTCTTCACGGCTAG
Transcript >Ophcf2|06256
ATGCGCGCTCACACGCAGCCGACGCAGCCGACGCTCTCGCCGCCGCTGCTGCTGCTGCTGCTGCTACCGCTCCTG
GTCTCCTCGCTGGCTGGAAGTCTGAAACCCGAGCCGGCTACTGTCAGCCACGCCCGCGTCGAGCCTCGTCATTAC
GTACCGACAAAGGAGGCTCCCGTCGATGGCAGAGACGGGAAGCCACATACAGGCCCCTTTGTCGAAAAGACGGAT
TCGGACAGGACAGGCTTGCCCCCTCTCCGGGGCCGACCCGAGGATCCCACTGTCGTGGACGGCATCAAAATTCCA
AAGTCAAATGACGGCGTCATGTTTGATAGGAACCGCGAGCGTCCCCTAGAGGGCACCACCGGCACCGAGGGCGGC
GTCTCCGAAAAGGACAAGGCTCGCAAGGAAAAGGAGGGCCAGACCGGGGAGCGCACCGTCGGACAGCCCAAGTCA
CCCAAGGAGCAGCCCCGGCTACCAGACAGCGAGGAGAAGAAGCTGCAAACGAATGGCGACGACAGGTACAGGCCT
GCAGTGGAGGACAGCTCATCAAGCGGCTACACGGGGCTGGGGAAACCCGCAGACATACCCGACATCCCCCGCGAA
GACGCAATGCCTCCACCCAAGTCCAAGACCAGCGAAGCAGAAGTGCCCCTAACAGGTTCGCCACGCAAGACGAGC
CACAAAAGCAGCGACCTACACGCCGACGACGAAGACGGCATCATCCGACCCTTCCACTCCTTCGTCCTCTCCCTG
ACCATGATCCTGGTATCCGAGGTAGGCGACAAGACATTCCTGGTAGCAGCTCTCATGGCGATGAAGCACGATCGC
CTCCTCGTCTTCTCCGCCGCCTTTGGCGCCCTCCTCGTCATGACGGTCCTATCAGCGCTACTCGGGCACGCCGTC
CCGACGCTGATACCTAAGCGGCTCACCAGCCTCCTCGCCGCCATCCTCTTCTTCGTCTTCGGCCTCAAGCTCCTC
CGCGAAGGTCTGAACATGGATCCCGACGAGGGCGTCGCCGCCGAGATGCAAGAAGTAGAACAAGAGCTCGCCGAC
AAGGAAAAAGAACAACACGGCCATCCCTACCGTCAACATTCCCTCTCACCACACGCCCTAGAAATGGGCCTCGCC
CCCCGAAACCCCCCGCGGCTCCCAGGCCAAAGCAGCGGCCGCTCGATAGACGACTTCGTCCACGGCGTCGGAAAC
CTTTGCTCCCTCCTCCTCAGCCCAGCCTGGGTGCAGACCTTTGCCATGACCTTCCTGGGCGAGTGGGGTGACCGC
AGTCAGATCGCGACGATTGCAATGGCGGCTGGCCAGGATTACGCCTGGGTTACGCTGGGGGCTATGTGCGGTCAT
GCTGTTTGCACCGGCGTTGCCGTCGTGGGCGGGAGGGCTATAGCCGGACGCGTCAGCCTTAAAGTCGTTACCGTC
GGCGGTGCCCTCGCCTTCCTCCTCTTCTCCATCGTCTACCTCATCGAAGCTCTTCACGGCTAG
Gene >Ophcf2|06256
ATGCGCGCTCACACGCAGCCGACGCAGCCGACGCTCTCGCCGCCGCTGCTGCTGCTGCTGCTGCTACCGCTCCTG
GTCTCCTCGCTGGCTGGAAGTCTGAAACCCGAGCCGGCTACTGTCAGCCACGCCCGCGTCGAGCCTCGTCATTAC
GTACCGACAAAGGAGGCTCCCGTCGATGGCAGAGACGGGAAGCCACATACAGGCCCCTTTGTCGAAAAGACGGAT
TCGGACAGGACAGGCTTGCCCCCTCTCCGGGGCCGACCCGAGGATCCCACTGTCGTGGACGGCATCAAAATTCCA
AAGTCAAATGACGGCGTCATGTTTGATAGGAACCGCGAGCGTCCCCTAGAGGGCACCACCGGCACCGAGGGCGGC
GTCTCCGAAAAGGACAAGGCTCGCAAGGAAAAGGAGGGCCAGACCGGGGAGCGCACCGTCGGACAGCCCAAGTCA
CCCAAGGAGCAGCCCCGGCTACCAGACAGCGAGGAGAAGAAGCTGCAAACGAATGGCGACGACAGGTACAGGCCT
GCAGTGGAGGACAGCTCATCAAGCGGCTACACGGGGCTGGGGGCAGGTTTTCCCCGTTCTCTTTACCCCAGATAT
TGATGCGATGAATTCGTCATGACCGTCTACTGACGCGCTACAACAGAAACCCGCAGACATACCCGACATCCCCCG
CGAAGACGCAATGCCTCCACCCAAGTCCAAGACCAGCGAAGCAGAAGTGCCCCTAACAGGTTCGCCACGCAAGAC
GAGCCACAAAAGCAGCGACCTACACGCCGACGACGAAGACGGCATCATCCGACCCTTCCACTCCTTCGTCCTCTC
CCTGACCATGATCCTGGTATCCGAGGTAGGCGACAAGACATTCCTGGTAGCAGCTCTCATGGCGATGAAGCACGA
TCGCCTCCTCGTCTTCTCCGCCGCCTTTGGCGCCCTCCTCGTCATGACGGTCCTATCAGCGCTACTCGGGCACGC
CGTCCCGACGCTGATACCTAAGCGGCTCACCAGCCTCCTCGCCGCCATCCTCTTCTTCGTCTTCGGCCTCAAGCT
CCTCCGCGAAGGTCTGAACATGGATCCCGACGAGGGCGTCGCCGCCGAGATGCAAGAAGTAGAACAAGAGCTCGC
CGACAAGGAAAAAGAACAACACGGCCATCCCTACCGTCAACATTCCCTCTCACCACACGCCCTAGAAATGGGCCT
CGCCCCCCGAAACCCCCCGCGGCTCCCGTTCAAAAGGCCGTTTCCCTCCCCCCCGATCCCCATCGCAATCCCCCT
CCCGCCCGTGCTCCCCAACCAGAGGCCAAAGCAGCGGCCGCTCGATAGACGACTTCGTCCACGGCGTCGGAAACC
TTTGCTCCCTCCTCCTCAGCCCAGCCTGGGTGCAGACCTTTGCCATGACCTTCCTGGGCGAGTGGGGTGACCGCA
GTCAGATCGCGACGATTGCAATGGCGGCTGGCCAGGATTACGCCTGGGTTACGCTGGGGGCTATGTGCGGTCATG
CTGTTTGCACCGGCGTTGCCGTCGTGGGCGGGAGGGCTATAGCCGGACGCGTCAGCCTTAAAGTCGGTGAGTCTC
TCACCTCGCTCCTCCTGTCTGCCTATCCGGTATACGCTGACAGGAATATTGGTGATAGTTACCGTCGGCGGTGCC
CTCGCCTTCCTCCTCTTCTCCATCGTCTACCTCATCGAAGCTCTTCACGGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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