Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06250
Gene name
Locationscaffold_07:1693505..1693994
Strand+
Gene length (bp)489
Transcript length (bp)372
Coding sequence length (bp)372
Protein length (aa) 124

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01984 dsDNA_bind Double-stranded DNA-binding domain 2.3E-38 9 111

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear export signal 0.5822 0.4917 0.0152 0.0227 0.0867 0.0058 0.0653 0.1357 0.1464 0.0113

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup4534
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4002
Ophiocordyceps australis map64 (Brazil) OphauB2|7466
Ophiocordyceps camponoti-floridani Ophcf2|06250 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|5937
Ophiocordyceps kimflemingae Ophio5|3264
Ophiocordyceps subramaniannii Hirsu2|9477

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06250
MDDSELEQIRKARLEQLKAQGGESQEAQQQKQQQDEARQNMMSQILHPEAADRLGRIRLVKPQRASDVENRLIML
AQTGQLRQKVTEEQLKEMLNAVADNKAEERIVVSRRKGWDDDDDLLDL*
Coding >Ophcf2|06250
ATGGACGACTCGGAACTAGAGCAGATCCGAAAAGCCCGCCTCGAGCAGCTCAAAGCCCAAGGCGGCGAAAGCCAA
GAAGCACAACAACAAAAGCAACAACAAGACGAAGCGCGCCAAAACATGATGAGCCAGATCCTCCACCCCGAGGCA
GCGGACCGACTGGGCCGAATCCGGCTCGTCAAGCCACAGCGCGCATCCGACGTTGAGAACCGGCTCATCATGCTG
GCGCAGACGGGGCAGCTGCGGCAGAAGGTTACGGAGGAGCAGCTCAAGGAGATGCTCAATGCCGTGGCGGATAAT
AAGGCGGAGGAGAGGATCGTGGTTAGTCGGCGGAAGGGGTGGGATGATGATGATGACTTGTTGGACTTGTGA
Transcript >Ophcf2|06250
ATGGACGACTCGGAACTAGAGCAGATCCGAAAAGCCCGCCTCGAGCAGCTCAAAGCCCAAGGCGGCGAAAGCCAA
GAAGCACAACAACAAAAGCAACAACAAGACGAAGCGCGCCAAAACATGATGAGCCAGATCCTCCACCCCGAGGCA
GCGGACCGACTGGGCCGAATCCGGCTCGTCAAGCCACAGCGCGCATCCGACGTTGAGAACCGGCTCATCATGCTG
GCGCAGACGGGGCAGCTGCGGCAGAAGGTTACGGAGGAGCAGCTCAAGGAGATGCTCAATGCCGTGGCGGATAAT
AAGGCGGAGGAGAGGATCGTGGTTAGTCGGCGGAAGGGGTGGGATGATGATGATGACTTGTTGGACTTGTGA
Gene >Ophcf2|06250
ATGGACGACTCGGAACTAGAGCAGGTTCGTGCCTCGCACAAAGACAACCTCCCAAAAACAAGATGATGATTCTAA
CAAGGAATCAGATCCGAAAAGCCCGCCTCGAGCAGCTCAAAGCCCAAGGCGGCGAAAGCCAAGAAGCACAACAAC
AAAAGCAGTGAGCACCCTTCCTCCCCTCCCCACGCCAAACCCCCCTAACAGCCTCAACGCAGACAACAAGACGAA
GCGCGCCAAAACATGATGAGCCAGATCCTCCACCCCGAGGCAGCGGACCGACTGGGCCGAATCCGGCTCGTCAAG
CCACAGCGCGCATCCGACGTTGAGAACCGGCTCATCATGCTGGCGCAGACGGGGCAGCTGCGGCAGAAGGTTACG
GAGGAGCAGCTCAAGGAGATGCTCAATGCCGTGGCGGATAATAAGGCGGAGGAGAGGATCGTGGTTAGTCGGCGG
AAGGGGTGGGATGATGATGATGACTTGTTGGACTTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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