Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06243
Gene name
Locationscaffold_07:1680462..1681601
Strand-
Gene length (bp)1139
Transcript length (bp)873
Coding sequence length (bp)873
Protein length (aa) 291

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02104 SURF1 SURF1 family 4.3E-54 55 263

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 46 68 22
2 254 273 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06243
MTKMIRRICRPGISVSSSRQQPADDPTFVSILDGPPRIARIKRKHGPGLILLALIPITAFALGTWQVQRLRWKSE
LIAKLEDRLIRDPLPLPPHVDPSALDEFDYRRVVASGYFRHDQEMLIGPRIRDGQDGFLVVTPLERVDASTVLVN
RGWISKKFARQASRPDSLPTHLATVEGLLRKPWKKNMFTPDNKPESGQFYFPDVEQMAALTDSQPVWVESTTEPE
FMTIIDLESRGIPIGRSPEVSLRNNHAQYIVTWYSLCLATSVMFYMLVKKPPPGMARQLHPHRKF*
Coding >Ophcf2|06243
ATGACCAAGATGATCCGCCGCATCTGCCGCCCCGGAATCTCCGTATCGTCTTCAAGACAACAGCCAGCCGACGAC
CCAACCTTCGTCTCCATCCTCGACGGCCCCCCAAGAATCGCCCGAATCAAGCGCAAACACGGCCCCGGCCTCATC
CTCCTCGCCCTCATCCCAATCACCGCCTTCGCCCTCGGAACATGGCAGGTTCAACGCCTTCGCTGGAAATCAGAA
CTCATCGCTAAGCTAGAGGATCGGCTCATTCGAGATCCGCTTCCTCTGCCGCCGCATGTCGACCCGTCCGCCCTC
GATGAATTCGACTACCGCCGTGTCGTTGCATCGGGATATTTCCGTCATGATCAGGAGATGCTCATTGGGCCTCGG
ATTCGTGACGGCCAAGATGGCTTTCTCGTCGTCACGCCTCTTGAGAGGGTAGACGCGTCGACCGTCTTGGTAAAC
CGCGGCTGGATCAGCAAGAAGTTTGCCCGTCAGGCTTCCCGGCCCGATTCGCTTCCGACTCATCTCGCCACCGTC
GAGGGATTGCTGCGCAAGCCGTGGAAGAAGAACATGTTTACGCCCGATAACAAGCCCGAAAGCGGCCAATTTTAT
TTTCCCGACGTTGAGCAAATGGCTGCCCTGACCGACAGCCAGCCTGTTTGGGTCGAATCTACCACGGAGCCCGAG
TTCATGACCATAATAGACCTCGAGTCCCGCGGCATCCCCATCGGGCGGTCTCCCGAGGTCAGCTTGAGAAACAAC
CACGCGCAGTACATCGTCACCTGGTATTCCTTGTGCTTGGCCACATCCGTCATGTTCTACATGTTGGTCAAGAAA
CCTCCACCAGGCATGGCCCGTCAACTGCACCCGCACAGAAAATTCTAG
Transcript >Ophcf2|06243
ATGACCAAGATGATCCGCCGCATCTGCCGCCCCGGAATCTCCGTATCGTCTTCAAGACAACAGCCAGCCGACGAC
CCAACCTTCGTCTCCATCCTCGACGGCCCCCCAAGAATCGCCCGAATCAAGCGCAAACACGGCCCCGGCCTCATC
CTCCTCGCCCTCATCCCAATCACCGCCTTCGCCCTCGGAACATGGCAGGTTCAACGCCTTCGCTGGAAATCAGAA
CTCATCGCTAAGCTAGAGGATCGGCTCATTCGAGATCCGCTTCCTCTGCCGCCGCATGTCGACCCGTCCGCCCTC
GATGAATTCGACTACCGCCGTGTCGTTGCATCGGGATATTTCCGTCATGATCAGGAGATGCTCATTGGGCCTCGG
ATTCGTGACGGCCAAGATGGCTTTCTCGTCGTCACGCCTCTTGAGAGGGTAGACGCGTCGACCGTCTTGGTAAAC
CGCGGCTGGATCAGCAAGAAGTTTGCCCGTCAGGCTTCCCGGCCCGATTCGCTTCCGACTCATCTCGCCACCGTC
GAGGGATTGCTGCGCAAGCCGTGGAAGAAGAACATGTTTACGCCCGATAACAAGCCCGAAAGCGGCCAATTTTAT
TTTCCCGACGTTGAGCAAATGGCTGCCCTGACCGACAGCCAGCCTGTTTGGGTCGAATCTACCACGGAGCCCGAG
TTCATGACCATAATAGACCTCGAGTCCCGCGGCATCCCCATCGGGCGGTCTCCCGAGGTCAGCTTGAGAAACAAC
CACGCGCAGTACATCGTCACCTGGTATTCCTTGTGCTTGGCCACATCCGTCATGTTCTACATGTTGGTCAAGAAA
CCTCCACCAGGCATGGCCCGTCAACTGCACCCGCACAGAAAATTCTAG
Gene >Ophcf2|06243
ATGACCAAGATGATCCGCCGCATCTGCCGCCCCGGAATCTCCGTATCGTCTTCAGTCCGCCCCTCAGTATCTCTC
CAATCCCACCCAATTCCATCACCAGCCCGTTCGCCCTCCCACCTCTTCACAACCACCTCTCTCCGCCAGAGACAA
CAGCCAGCCGACGACCCAACCTTCGTCTCCATCCTCGACGGCCCCCCAAGAATCGCCCGAATCAAGCGCAAACAC
GGCCCCGGCCTCATCCTCCTCGGTACAGCCCAAAAAACGAAGAAAGCCAAGACGTTTCCTGATCCCCGCCTACAG
CCCTCATCCCAATCACCGCCTTCGCCCTCGGAACATGGCAGGTTCAACGCCTTCGCTGGAAATCAGAACTCATCG
CTAAGCTAGAGGATCGGCTCATTCGAGATCCGCTTCCTCTGCCGCCGCATGTCGACCCGTCCGCCCTCGATGAAT
TCGACTACCGCCGTGTCGTTGCATCGGGATATTTCCGTCATGATCAGGAGATGCTCATTGGGCCTCGGATTCGTG
ACGGCCAAGATGGCTTTCTCGTCGTCACGCCTCTTGAGAGGGTAGACGCGTCGACCGTCTTGGTAAACCGCGGCT
GGATCAGCAAGAAGTTTGCCCGTCAGGCTTCCCGGCCCGATTCGCTTCCGACTCATCTCGCCACCGTCGAGGGAT
TGCTGCGCAAGCCGTGGAAGAAGAACATGTTTACGCCCGATAACAAGCCCGAAAGCGGCCAATTTTATTTTCCCG
ACGTTGAGCAAATGGCTGCCCTGACCGACAGCCAGCCTGTTTGGGTCGAATCTACCACGGGTATATCCTCCTAGC
TGCCAGCCTCACCTCCTCCCTTGATCCTTCGTCCGGCGCTAAATGACGACAGAGCCCGAGTTCATGACCATAATA
GACCTCGAGTCCCGCGGCATCCCCATCGGGCGGTCTCCCGAGGTCAGCTTGAGAAACAACCACGCGCAGTACATC
GTCACCTGGTACGTCGCCCTTGCCCCCCCCCTTTGCTGGGAACCGATATTCTGACAAGACCCAGGTATTCCTTGT
GCTTGGCCACATCCGTCATGTTCTACATGTTGGTCAAGAAACCTCCACCAGGCATGGCCCGTCAACTGCACCCGC
ACAGAAAATTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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