Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06201
Gene name
Locationscaffold_07:1581320..1582881
Strand+
Gene length (bp)1561
Transcript length (bp)1482
Coding sequence length (bp)1482
Protein length (aa) 494

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 9.8E-36 111 443
PF00083 Sugar_tr Sugar (and other) transporter 2.4E-05 102 208

GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0008150 biological_process No
GO:0031224 intrinsic component of membrane No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 57 0.45

Transmembrane Domains

Domain # Start End Length
1 104 126 22
2 141 163 22
3 170 188 18
4 198 220 22
5 227 249 22
6 259 281 22
7 302 324 22
8 337 359 22
9 366 388 22
10 394 416 22
11 429 451 22
12 461 483 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 61.64 35.25 88.03
Alive In ants, during behavior modification 405.40 57.80 753.00
Dead In ants, recently dead 95.37 53.79 136.95

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.000238 yes
Alive Dead 0.000238 yes
Dead Fungus 0.017444 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06201
MDVHQVNSRALHDDDDDSAATATMTTTTTTAVVAAAAAVARNDEDEDEDEDEDEDEDEDDDDDHRVRRQHQPDNI
DGDALEKRASSASYEETYPEGGLRAWLVVLGSWFAMVSSMGLMNTVGIFQAYTLRHQLRHHSEGTVGWIFSVYTF
LSFFCGVYIGPVFDKYGPRWLVVAGCASTFVGVLLLSFCQELWQFVLSFGVLAGFGTSLLFTPCIAAVGHWFRRR
RGFATGMASTAGGIGGIVFPLMLTSLFESVGYGWATRALALACLACGLVGVALVRSRLPPAQDATAHPDLRILRQ
VPFTLTTVAIFLLEFSLFIPLTFISTYAMHEGFDQSFAFHLLPIMNAGSVVGRALPGYYADVVGPFNVCLASVLL
SLVACLCVWLPLGHTAAGIIVFSLIFGFASGTSIAIAPVCIGRMCKTRNYGRYYATTYTVVSFACLLGVPIGGSI
VRASGGSYTSLIVLTGAVYVGSALCMLMAKVWHLGWKRWLAVY*
Coding >Ophcf2|06201
ATGGATGTGCATCAGGTCAATTCGCGGGCCTTGCACGATGACGATGATGATAGTGCGGCGACGGCGACGATGACG
ACGACGACGACTACTGCTGTTGTTGCTGCTGCTGCTGCTGTGGCGAGGAATGACGAGGATGAGGATGAGGATGAG
GATGAGGATGAGGATGAGGATGAGGATGATGACGATGATCATCGTGTTCGTCGTCAACATCAACCGGACAATATT
GATGGCGACGCGCTCGAGAAGAGGGCTTCATCCGCATCTTACGAAGAGACGTATCCCGAAGGAGGGCTGCGGGCC
TGGCTGGTCGTCTTGGGAAGTTGGTTCGCCATGGTTTCGTCGATGGGGTTGATGAATACGGTTGGCATCTTTCAG
GCTTATACGCTGCGTCACCAGCTTCGACATCATAGCGAGGGGACGGTCGGCTGGATCTTTTCCGTCTATACCTTT
CTCTCCTTCTTCTGCGGCGTCTACATCGGTCCCGTCTTCGACAAGTACGGTCCTAGATGGCTGGTTGTCGCCGGC
TGTGCGAGCACCTTTGTCGGCGTATTGCTACTGAGTTTCTGTCAAGAACTCTGGCAATTCGTCCTCTCCTTCGGC
GTCCTCGCCGGTTTCGGCACCTCCCTCCTCTTCACGCCCTGCATAGCAGCCGTGGGCCACTGGTTCCGCCGTCGA
CGCGGCTTCGCAACAGGCATGGCCTCGACGGCCGGCGGGATAGGCGGCATCGTCTTCCCCTTGATGCTCACCTCT
CTCTTCGAAAGCGTCGGTTACGGATGGGCCACGCGCGCCTTGGCCCTCGCCTGTTTGGCCTGCGGACTCGTCGGC
GTTGCGCTCGTGCGCTCTCGTCTCCCGCCCGCTCAGGACGCCACGGCTCATCCCGATCTTCGAATCCTGCGACAG
GTTCCCTTTACGCTGACGACCGTCGCCATCTTCCTACTCGAGTTTTCGCTCTTCATCCCCCTGACCTTTATATCG
ACGTATGCCATGCACGAGGGTTTCGACCAATCCTTCGCCTTTCATCTTCTCCCCATCATGAACGCCGGCTCCGTC
GTGGGCCGCGCTTTACCAGGATACTACGCCGACGTGGTCGGTCCCTTCAACGTCTGTCTCGCCTCGGTCCTCCTC
TCGCTGGTAGCCTGTCTCTGCGTCTGGCTACCGCTGGGACACACAGCGGCCGGCATAATCGTCTTCTCCCTCATC
TTCGGCTTCGCAAGCGGGACGAGCATCGCCATCGCGCCCGTCTGCATAGGCCGGATGTGCAAGACGCGCAACTAC
GGCCGCTACTACGCGACCACCTACACCGTCGTCTCCTTCGCCTGCCTCCTGGGCGTGCCCATCGGGGGATCTATC
GTTCGGGCCAGCGGGGGGTCGTATACGAGTTTGATTGTGCTTACGGGGGCTGTCTACGTTGGTTCTGCGCTTTGT
ATGCTCATGGCTAAGGTGTGGCATTTGGGATGGAAGCGGTGGTTGGCCGTATATTGA
Transcript >Ophcf2|06201
ATGGATGTGCATCAGGTCAATTCGCGGGCCTTGCACGATGACGATGATGATAGTGCGGCGACGGCGACGATGACG
ACGACGACGACTACTGCTGTTGTTGCTGCTGCTGCTGCTGTGGCGAGGAATGACGAGGATGAGGATGAGGATGAG
GATGAGGATGAGGATGAGGATGAGGATGATGACGATGATCATCGTGTTCGTCGTCAACATCAACCGGACAATATT
GATGGCGACGCGCTCGAGAAGAGGGCTTCATCCGCATCTTACGAAGAGACGTATCCCGAAGGAGGGCTGCGGGCC
TGGCTGGTCGTCTTGGGAAGTTGGTTCGCCATGGTTTCGTCGATGGGGTTGATGAATACGGTTGGCATCTTTCAG
GCTTATACGCTGCGTCACCAGCTTCGACATCATAGCGAGGGGACGGTCGGCTGGATCTTTTCCGTCTATACCTTT
CTCTCCTTCTTCTGCGGCGTCTACATCGGTCCCGTCTTCGACAAGTACGGTCCTAGATGGCTGGTTGTCGCCGGC
TGTGCGAGCACCTTTGTCGGCGTATTGCTACTGAGTTTCTGTCAAGAACTCTGGCAATTCGTCCTCTCCTTCGGC
GTCCTCGCCGGTTTCGGCACCTCCCTCCTCTTCACGCCCTGCATAGCAGCCGTGGGCCACTGGTTCCGCCGTCGA
CGCGGCTTCGCAACAGGCATGGCCTCGACGGCCGGCGGGATAGGCGGCATCGTCTTCCCCTTGATGCTCACCTCT
CTCTTCGAAAGCGTCGGTTACGGATGGGCCACGCGCGCCTTGGCCCTCGCCTGTTTGGCCTGCGGACTCGTCGGC
GTTGCGCTCGTGCGCTCTCGTCTCCCGCCCGCTCAGGACGCCACGGCTCATCCCGATCTTCGAATCCTGCGACAG
GTTCCCTTTACGCTGACGACCGTCGCCATCTTCCTACTCGAGTTTTCGCTCTTCATCCCCCTGACCTTTATATCG
ACGTATGCCATGCACGAGGGTTTCGACCAATCCTTCGCCTTTCATCTTCTCCCCATCATGAACGCCGGCTCCGTC
GTGGGCCGCGCTTTACCAGGATACTACGCCGACGTGGTCGGTCCCTTCAACGTCTGTCTCGCCTCGGTCCTCCTC
TCGCTGGTAGCCTGTCTCTGCGTCTGGCTACCGCTGGGACACACAGCGGCCGGCATAATCGTCTTCTCCCTCATC
TTCGGCTTCGCAAGCGGGACGAGCATCGCCATCGCGCCCGTCTGCATAGGCCGGATGTGCAAGACGCGCAACTAC
GGCCGCTACTACGCGACCACCTACACCGTCGTCTCCTTCGCCTGCCTCCTGGGCGTGCCCATCGGGGGATCTATC
GTTCGGGCCAGCGGGGGGTCGTATACGAGTTTGATTGTGCTTACGGGGGCTGTCTACGTTGGTTCTGCGCTTTGT
ATGCTCATGGCTAAGGTGTGGCATTTGGGATGGAAGCGGTGGTTGGCCGTATATTGA
Gene >Ophcf2|06201
ATGGATGTGCATCAGGTCAATTCGCGGGCCTTGCACGATGACGATGATGATAGTGCGGCGACGGCGACGATGACG
ACGACGACGACTACTGCTGTTGTTGCTGCTGCTGCTGCTGTGGCGAGGAATGACGAGGATGAGGATGAGGATGAG
GATGAGGATGAGGATGAGGATGAGGATGATGACGATGATCATCGTGTTCGTCGTCAACATCAACCGGACAATATT
GATGGCGACGCGCTCGAGAAGAGGGCTTCATCCGCATCTTACGAAGAGACGTATCCCGAAGGAGGGCTGCGGGCC
TGGCTGGTCGTCTTGGGAAGTTGGTTCGCCATGGTTTCGTCGATGGGGTTGATGAATACGGTTGGCATCTTTCAG
GCTTATACGCTGCGTCACCAGCTTCGACATCATAGCGAGGGGACGGTCGGCTGGATCTTTTCCGTCTATACCTTT
CTCTCCTTCTTCTGCGGCGTCTACATCGGTCCCGTCTTCGACAAGTACGGTCCTAGATGGCTGGTTGTCGCCGGC
TGTGCGAGCACCTTTGTCGGCGTATTGCTACTGAGTTTCTGTCAAGGTGAGTCGACTACCTACCTAACCTCTCCC
TTTTATAAACCCCCTTCCTTCATCCCATCCAACTAACAATCCCGACCAAGAACTCTGGCAATTCGTCCTCTCCTT
CGGCGTCCTCGCCGGTTTCGGCACCTCCCTCCTCTTCACGCCCTGCATAGCAGCCGTGGGCCACTGGTTCCGCCG
TCGACGCGGCTTCGCAACAGGCATGGCCTCGACGGCCGGCGGGATAGGCGGCATCGTCTTCCCCTTGATGCTCAC
CTCTCTCTTCGAAAGCGTCGGTTACGGATGGGCCACGCGCGCCTTGGCCCTCGCCTGTTTGGCCTGCGGACTCGT
CGGCGTTGCGCTCGTGCGCTCTCGTCTCCCGCCCGCTCAGGACGCCACGGCTCATCCCGATCTTCGAATCCTGCG
ACAGGTTCCCTTTACGCTGACGACCGTCGCCATCTTCCTACTCGAGTTTTCGCTCTTCATCCCCCTGACCTTTAT
ATCGACGTATGCCATGCACGAGGGTTTCGACCAATCCTTCGCCTTTCATCTTCTCCCCATCATGAACGCCGGCTC
CGTCGTGGGCCGCGCTTTACCAGGATACTACGCCGACGTGGTCGGTCCCTTCAACGTCTGTCTCGCCTCGGTCCT
CCTCTCGCTGGTAGCCTGTCTCTGCGTCTGGCTACCGCTGGGACACACAGCGGCCGGCATAATCGTCTTCTCCCT
CATCTTCGGCTTCGCAAGCGGGACGAGCATCGCCATCGCGCCCGTCTGCATAGGCCGGATGTGCAAGACGCGCAA
CTACGGCCGCTACTACGCGACCACCTACACCGTCGTCTCCTTCGCCTGCCTCCTGGGCGTGCCCATCGGGGGATC
TATCGTTCGGGCCAGCGGGGGGTCGTATACGAGTTTGATTGTGCTTACGGGGGCTGTCTACGTTGGTTCTGCGCT
TTGTATGCTCATGGCTAAGGTGTGGCATTTGGGATGGAAGCGGTGGTTGGCCGTATATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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