Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06155
Gene name
Locationscaffold_07:1412073..1412733
Strand+
Gene length (bp)660
Transcript length (bp)660
Coding sequence length (bp)660
Protein length (aa) 220

Overview

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PFAM Domains

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.3904 0.2502 0.7077 0.0638 0.2468 0.0679 0.1707 0.2176 0.1746 0.0375

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5532
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|4157
Ophiocordyceps camponoti-floridani Ophcf2|06155 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|419
Ophiocordyceps kimflemingae Ophio5|4852
Ophiocordyceps subramaniannii Hirsu2|6916

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06155
MHLASQLFVFDSFQLNSAQLNSAQLNQLNSVNSVNSVNSVNSVNSNSAHLNPSQPYNALPSPWGYLRFGSDTKRT
TFRVCQSVGDCRLPHSSPYRQLLGNPARFWLFDVEGNDYAPRGSIIAADALPFATSRLLFASASNSKYYVNFWGE
NDRCGADERYLGNCPLRLRVDNLRDDKGLTMGTDKYIRVAASADSYLNVTFHERECPEDKDMVQLNLEL*
Coding >Ophcf2|06155
ATGCATCTAGCTTCGCAACTCTTTGTCTTTGACTCATTTCAACTCAACTCGGCTCAACTCAACTCGGCTCAACTC
AACCAACTCAACTCAGTCAACTCAGTCAACTCAGTCAACTCAGTCAACTCAGTCAACTCAAACTCAGCCCACCTC
AACCCATCTCAACCTTACAATGCCCTCCCGTCCCCCTGGGGCTACCTCCGCTTCGGCAGCGACACCAAGCGCACC
ACCTTTCGCGTCTGCCAGAGCGTAGGCGACTGCCGCCTCCCCCATTCGTCGCCCTACCGACAGCTCCTCGGAAAC
CCGGCCCGCTTCTGGCTCTTCGACGTCGAGGGCAACGATTACGCCCCCCGGGGCTCCATCATAGCCGCCGACGCC
CTGCCCTTTGCCACCAGCAGGCTTCTGTTCGCCTCGGCCTCCAACTCCAAATACTATGTCAACTTCTGGGGGGAG
AACGACCGTTGCGGCGCTGACGAGCGTTATCTCGGCAACTGTCCCCTCCGGCTGCGCGTCGACAACCTCCGCGAC
GACAAGGGCTTGACCATGGGGACCGACAAGTATATCCGCGTCGCCGCCTCGGCCGACAGTTACCTCAACGTCACC
TTTCACGAGAGGGAGTGCCCGGAGGACAAGGACATGGTCCAGCTGAACCTTGAGTTGTAG
Transcript >Ophcf2|06155
ATGCATCTAGCTTCGCAACTCTTTGTCTTTGACTCATTTCAACTCAACTCGGCTCAACTCAACTCGGCTCAACTC
AACCAACTCAACTCAGTCAACTCAGTCAACTCAGTCAACTCAGTCAACTCAGTCAACTCAAACTCAGCCCACCTC
AACCCATCTCAACCTTACAATGCCCTCCCGTCCCCCTGGGGCTACCTCCGCTTCGGCAGCGACACCAAGCGCACC
ACCTTTCGCGTCTGCCAGAGCGTAGGCGACTGCCGCCTCCCCCATTCGTCGCCCTACCGACAGCTCCTCGGAAAC
CCGGCCCGCTTCTGGCTCTTCGACGTCGAGGGCAACGATTACGCCCCCCGGGGCTCCATCATAGCCGCCGACGCC
CTGCCCTTTGCCACCAGCAGGCTTCTGTTCGCCTCGGCCTCCAACTCCAAATACTATGTCAACTTCTGGGGGGAG
AACGACCGTTGCGGCGCTGACGAGCGTTATCTCGGCAACTGTCCCCTCCGGCTGCGCGTCGACAACCTCCGCGAC
GACAAGGGCTTGACCATGGGGACCGACAAGTATATCCGCGTCGCCGCCTCGGCCGACAGTTACCTCAACGTCACC
TTTCACGAGAGGGAGTGCCCGGAGGACAAGGACATGGTCCAGCTGAACCTTGAGTTGTAG
Gene >Ophcf2|06155
ATGCATCTAGCTTCGCAACTCTTTGTCTTTGACTCATTTCAACTCAACTCGGCTCAACTCAACTCGGCTCAACTC
AACCAACTCAACTCAGTCAACTCAGTCAACTCAGTCAACTCAGTCAACTCAGTCAACTCAAACTCAGCCCACCTC
AACCCATCTCAACCTTACAATGCCCTCCCGTCCCCCTGGGGCTACCTCCGCTTCGGCAGCGACACCAAGCGCACC
ACCTTTCGCGTCTGCCAGAGCGTAGGCGACTGCCGCCTCCCCCATTCGTCGCCCTACCGACAGCTCCTCGGAAAC
CCGGCCCGCTTCTGGCTCTTCGACGTCGAGGGCAACGATTACGCCCCCCGGGGCTCCATCATAGCCGCCGACGCC
CTGCCCTTTGCCACCAGCAGGCTTCTGTTCGCCTCGGCCTCCAACTCCAAATACTATGTCAACTTCTGGGGGGAG
AACGACCGTTGCGGCGCTGACGAGCGTTATCTCGGCAACTGTCCCCTCCGGCTGCGCGTCGACAACCTCCGCGAC
GACAAGGGCTTGACCATGGGGACCGACAAGTATATCCGCGTCGCCGCCTCGGCCGACAGTTACCTCAACGTCACC
TTTCACGAGAGGGAGTGCCCGGAGGACAAGGACATGGTCCAGCTGAACCTTGAGTTGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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