Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06150
Gene name
Locationscaffold_07:1397152..1397906
Strand-
Gene length (bp)754
Transcript length (bp)660
Coding sequence length (bp)660
Protein length (aa) 220

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 77 99 22
2 132 154 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06150
MDIATSRQPPPTSTSVLKRLSPSVHPDINPGPSASPPPPLPGPDPSPETGARHVPLPPSSPSPYSNYTPFRRQLH
QLGLFFAGAGFLAASIAVSRRAVLRRQLEALPGFHTSNRHAPPADASDRLGLAAQALGLATLNVCSFGILLTGGI
AWAFDLCSVAELRHRTQEALRRPSASTDPDAEREMEEAMVSLMRKFGLDASLPDEPADTGRGDDASANK*
Coding >Ophcf2|06150
ATGGATATAGCCACCTCCCGTCAACCACCACCCACCTCAACCTCCGTCCTTAAGAGATTGTCCCCATCCGTTCAT
CCCGACATCAACCCCGGCCCCTCCGCCTCCCCTCCGCCCCCCCTCCCCGGGCCCGACCCAAGCCCTGAGACCGGA
GCCCGCCATGTCCCTCTTCCTCCATCTTCCCCCTCGCCATACAGCAACTACACCCCCTTCCGTCGCCAGCTCCAC
CAACTAGGCCTCTTCTTCGCCGGCGCCGGATTCCTTGCCGCCTCGATAGCCGTCTCCCGCCGGGCCGTCCTCCGC
CGCCAGCTAGAAGCCCTCCCCGGCTTCCACACCTCGAACCGGCACGCGCCCCCCGCCGACGCCTCGGACCGTCTC
GGACTCGCCGCCCAGGCGCTTGGGCTGGCGACGCTCAACGTCTGCAGCTTCGGCATCCTTCTTACCGGCGGCATT
GCCTGGGCCTTTGACCTCTGCTCCGTTGCTGAGCTGCGCCATCGCACGCAGGAGGCTTTGCGGCGACCAAGTGCC
AGCACTGACCCGGATGCTGAGCGGGAGATGGAGGAGGCTATGGTGTCGCTGATGCGCAAGTTTGGCTTGGACGCT
TCCTTGCCGGATGAGCCCGCCGACACAGGCCGGGGAGACGATGCATCCGCCAACAAGTGA
Transcript >Ophcf2|06150
ATGGATATAGCCACCTCCCGTCAACCACCACCCACCTCAACCTCCGTCCTTAAGAGATTGTCCCCATCCGTTCAT
CCCGACATCAACCCCGGCCCCTCCGCCTCCCCTCCGCCCCCCCTCCCCGGGCCCGACCCAAGCCCTGAGACCGGA
GCCCGCCATGTCCCTCTTCCTCCATCTTCCCCCTCGCCATACAGCAACTACACCCCCTTCCGTCGCCAGCTCCAC
CAACTAGGCCTCTTCTTCGCCGGCGCCGGATTCCTTGCCGCCTCGATAGCCGTCTCCCGCCGGGCCGTCCTCCGC
CGCCAGCTAGAAGCCCTCCCCGGCTTCCACACCTCGAACCGGCACGCGCCCCCCGCCGACGCCTCGGACCGTCTC
GGACTCGCCGCCCAGGCGCTTGGGCTGGCGACGCTCAACGTCTGCAGCTTCGGCATCCTTCTTACCGGCGGCATT
GCCTGGGCCTTTGACCTCTGCTCCGTTGCTGAGCTGCGCCATCGCACGCAGGAGGCTTTGCGGCGACCAAGTGCC
AGCACTGACCCGGATGCTGAGCGGGAGATGGAGGAGGCTATGGTGTCGCTGATGCGCAAGTTTGGCTTGGACGCT
TCCTTGCCGGATGAGCCCGCCGACACAGGCCGGGGAGACGATGCATCCGCCAACAAGTGA
Gene >Ophcf2|06150
ATGGATATAGGTGAGAGGTTGAGATGAAGTTTCGGTACCAGATGGTTGGCAGCCTTATCCTTATCGCTTCCCGCG
GATTCCCCCGCCAATCGGACCAATCACAGCCACCTCCCGTCAACCACCACCCACCTCAACCTCCGTCCTTAAGAG
ATTGTCCCCATCCGTTCATCCCGACATCAACCCCGGCCCCTCCGCCTCCCCTCCGCCCCCCCTCCCCGGGCCCGA
CCCAAGCCCTGAGACCGGAGCCCGCCATGTCCCTCTTCCTCCATCTTCCCCCTCGCCATACAGCAACTACACCCC
CTTCCGTCGCCAGCTCCACCAACTAGGCCTCTTCTTCGCCGGCGCCGGATTCCTTGCCGCCTCGATAGCCGTCTC
CCGCCGGGCCGTCCTCCGCCGCCAGCTAGAAGCCCTCCCCGGCTTCCACACCTCGAACCGGCACGCGCCCCCCGC
CGACGCCTCGGACCGTCTCGGACTCGCCGCCCAGGCGCTTGGGCTGGCGACGCTCAACGTCTGCAGCTTCGGCAT
CCTTCTTACCGGCGGCATTGCCTGGGCCTTTGACCTCTGCTCCGTTGCTGAGCTGCGCCATCGCACGCAGGAGGC
TTTGCGGCGACCAAGTGCCAGCACTGACCCGGATGCTGAGCGGGAGATGGAGGAGGCTATGGTGTCGCTGATGCG
CAAGTTTGGCTTGGACGCTTCCTTGCCGGATGAGCCCGCCGACACAGGCCGGGGAGACGATGCATCCGCCAACAA
GTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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