Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06148
Gene name
Locationscaffold_07:1390497..1391912
Strand+
Gene length (bp)1415
Transcript length (bp)1314
Coding sequence length (bp)1314
Protein length (aa) 438

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

Domain # Start End Length
1 285 307 22
2 314 336 22
3 409 431 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06148
MARFFSLGYTRPKHVDSPPSRDGSQEIVSIRSGSSGSSAGIPDSLTFDNIMNGGTCPPMTVRDFMNYLIYVEHAA
ENLQFWLWYRDYVKRFQSAETADLDLAPIWTQAMEEDVVARIRKEQAEKLRPEPKSAADVFRGTDFEKTAADHAG
SNPFNTPPRTSYSVAESLSTSPISMPSGASSGYKSQASVAYDCAGARQPFTIQPFRDEMDRVLATYIMDGAPRQL
NLASWELKAAVHALSHTTHPTALRSLFFTVDASLRRQAHPNFVRWSICNGNPARVFFARALGIGLILCGFLMGIV
MCLSRLGRGYRAFVALPFVLGISTLVAAYKGMCVVLHGMHHRHVRPWELFVQDDGEEMGKTSFESFGSANSYEDE
PWVIKYEKRNFVRKIFDREVWVQEPVLRQVQDIIFVQAILASLLLGGLLTAVFVALPRGRLF*
Coding >Ophcf2|06148
ATGGCGAGGTTCTTCTCGCTCGGATACACACGCCCCAAACATGTCGACTCTCCTCCCAGCCGCGACGGCTCTCAA
GAGATCGTCTCTATCCGGTCCGGCAGCTCGGGCTCCTCGGCCGGCATCCCCGACTCCCTGACCTTTGACAACATC
ATGAACGGCGGCACCTGTCCACCCATGACGGTCCGCGACTTCATGAACTACCTCATCTATGTCGAGCACGCAGCC
GAGAATCTGCAGTTTTGGCTGTGGTACAGAGACTATGTCAAGCGCTTCCAATCAGCCGAGACAGCAGACCTGGAC
TTGGCCCCAATCTGGACCCAGGCCATGGAAGAAGACGTCGTGGCCAGAATCCGCAAGGAACAGGCCGAGAAGCTG
CGTCCCGAGCCCAAGTCGGCAGCAGACGTCTTCAGGGGAACCGACTTCGAAAAGACGGCTGCTGATCACGCGGGT
TCCAACCCCTTCAACACTCCGCCTCGCACATCGTATAGTGTGGCCGAGTCGCTGAGCACATCACCCATCAGTATG
CCTTCGGGCGCCTCGTCTGGCTATAAGTCGCAGGCAAGCGTCGCCTACGACTGCGCCGGGGCCAGACAGCCGTTC
ACCATCCAGCCATTCCGCGACGAGATGGACCGCGTCCTGGCCACGTATATCATGGACGGCGCCCCGAGACAGCTG
AACCTCGCATCGTGGGAGCTCAAGGCAGCCGTCCACGCGCTGTCGCACACGACGCACCCAACCGCCCTTCGATCG
CTCTTCTTCACCGTCGACGCCTCTCTCCGTCGCCAAGCCCATCCCAACTTCGTGAGGTGGTCCATCTGCAACGGA
AACCCGGCACGCGTCTTCTTCGCTCGCGCCCTCGGCATCGGCCTCATCCTATGTGGCTTCCTCATGGGCATCGTC
ATGTGTCTGAGCCGCTTGGGCCGTGGCTATCGCGCTTTTGTGGCCCTGCCTTTTGTCTTGGGCATCAGCACGCTC
GTGGCGGCTTACAAAGGAATGTGCGTGGTGCTGCACGGGATGCATCATCGGCACGTGCGTCCGTGGGAGCTCTTT
GTCCAGGACGACGGCGAGGAGATGGGGAAGACGAGCTTCGAGTCTTTTGGGTCGGCCAACAGCTACGAAGACGAG
CCGTGGGTGATCAAGTATGAGAAGCGCAACTTTGTCCGCAAGATATTCGACCGCGAAGTCTGGGTTCAGGAGCCT
GTGTTGCGTCAGGTCCAAGATATCATCTTTGTGCAGGCTATTCTGGCGTCGCTTCTTCTTGGGGGGTTGCTGACG
GCCGTCTTTGTTGCCTTGCCAAGAGGCAGGTTGTTTTGA
Transcript >Ophcf2|06148
ATGGCGAGGTTCTTCTCGCTCGGATACACACGCCCCAAACATGTCGACTCTCCTCCCAGCCGCGACGGCTCTCAA
GAGATCGTCTCTATCCGGTCCGGCAGCTCGGGCTCCTCGGCCGGCATCCCCGACTCCCTGACCTTTGACAACATC
ATGAACGGCGGCACCTGTCCACCCATGACGGTCCGCGACTTCATGAACTACCTCATCTATGTCGAGCACGCAGCC
GAGAATCTGCAGTTTTGGCTGTGGTACAGAGACTATGTCAAGCGCTTCCAATCAGCCGAGACAGCAGACCTGGAC
TTGGCCCCAATCTGGACCCAGGCCATGGAAGAAGACGTCGTGGCCAGAATCCGCAAGGAACAGGCCGAGAAGCTG
CGTCCCGAGCCCAAGTCGGCAGCAGACGTCTTCAGGGGAACCGACTTCGAAAAGACGGCTGCTGATCACGCGGGT
TCCAACCCCTTCAACACTCCGCCTCGCACATCGTATAGTGTGGCCGAGTCGCTGAGCACATCACCCATCAGTATG
CCTTCGGGCGCCTCGTCTGGCTATAAGTCGCAGGCAAGCGTCGCCTACGACTGCGCCGGGGCCAGACAGCCGTTC
ACCATCCAGCCATTCCGCGACGAGATGGACCGCGTCCTGGCCACGTATATCATGGACGGCGCCCCGAGACAGCTG
AACCTCGCATCGTGGGAGCTCAAGGCAGCCGTCCACGCGCTGTCGCACACGACGCACCCAACCGCCCTTCGATCG
CTCTTCTTCACCGTCGACGCCTCTCTCCGTCGCCAAGCCCATCCCAACTTCGTGAGGTGGTCCATCTGCAACGGA
AACCCGGCACGCGTCTTCTTCGCTCGCGCCCTCGGCATCGGCCTCATCCTATGTGGCTTCCTCATGGGCATCGTC
ATGTGTCTGAGCCGCTTGGGCCGTGGCTATCGCGCTTTTGTGGCCCTGCCTTTTGTCTTGGGCATCAGCACGCTC
GTGGCGGCTTACAAAGGAATGTGCGTGGTGCTGCACGGGATGCATCATCGGCACGTGCGTCCGTGGGAGCTCTTT
GTCCAGGACGACGGCGAGGAGATGGGGAAGACGAGCTTCGAGTCTTTTGGGTCGGCCAACAGCTACGAAGACGAG
CCGTGGGTGATCAAGTATGAGAAGCGCAACTTTGTCCGCAAGATATTCGACCGCGAAGTCTGGGTTCAGGAGCCT
GTGTTGCGTCAGGTCCAAGATATCATCTTTGTGCAGGCTATTCTGGCGTCGCTTCTTCTTGGGGGGTTGCTGACG
GCCGTCTTTGTTGCCTTGCCAAGAGGCAGGTTGTTTTGA
Gene >Ophcf2|06148
ATGGCGAGGTTCTTCTCGCTCGGATACACACGCCCCAAACATGTCGACTCTCCTCCCAGCCGCGACGGCTCTCAA
GAGATCGTCTCTATCCGGTCCGGCAGCTCGGGCTCCTCGGCCGGCATCCCCGACTCCCTGACCTTTGACAACATC
ATGAACGGCGGCACCTGTCCAGTAAGTCGAGACCCAAGACCTCGTCTCTCGGTCTGACAGATGTTTGTTTTGTAG
CCCATGACGGTCCGCGACTTCATGAACTACCTCATCTATGTCGAGCACGCAGCCGAGAATCTGCAGTTTTGGCTG
TGGTACAGAGACTATGTCAAGCGCTTCCAATCAGCCGAGACAGCAGACCTGGACTTGGCCCCAATCTGGACCCAG
GCCATGGAAGAAGACGTCGTGGCCAGAATCCGCAAGGAACAGGCCGAGAAGCTGCGTCCCGAGCCCAAGTCGGCA
GCAGACGTCTTCAGGGGAACCGACTTCGAAAAGACGGCTGCTGATCACGCGGGTTCCAACCCCTTCAACACTCCG
CCTCGCACATCGTATAGTGTGGCCGAGTCGCTGAGCACATCACCCATCAGTATGCCTTCGGGCGCCTCGTCTGGC
TATAAGTCGCAGGCAAGCGTCGCCTACGACTGCGCCGGGGCCAGACAGCCGTGTAGGCGCTTCTCTCTCGGTCGA
TGCCGCTCTGGCTAACAGAATCAGTCACCATCCAGCCATTCCGCGACGAGATGGACCGCGTCCTGGCCACGTATA
TCATGGACGGCGCCCCGAGACAGCTGAACCTCGCATCGTGGGAGCTCAAGGCAGCCGTCCACGCGCTGTCGCACA
CGACGCACCCAACCGCCCTTCGATCGCTCTTCTTCACCGTCGACGCCTCTCTCCGTCGCCAAGCCCATCCCAACT
TCGTGAGGTGGTCCATCTGCAACGGAAACCCGGCACGCGTCTTCTTCGCTCGCGCCCTCGGCATCGGCCTCATCC
TATGTGGCTTCCTCATGGGCATCGTCATGTGTCTGAGCCGCTTGGGCCGTGGCTATCGCGCTTTTGTGGCCCTGC
CTTTTGTCTTGGGCATCAGCACGCTCGTGGCGGCTTACAAAGGAATGTGCGTGGTGCTGCACGGGATGCATCATC
GGCACGTGCGTCCGTGGGAGCTCTTTGTCCAGGACGACGGCGAGGAGATGGGGAAGACGAGCTTCGAGTCTTTTG
GGTCGGCCAACAGCTACGAAGACGAGCCGTGGGTGATCAAGTATGAGAAGCGCAACTTTGTCCGCAAGATATTCG
ACCGCGAAGTCTGGGTTCAGGAGCCTGTGTTGCGTCAGGTCCAAGATATCATCTTTGTGCAGGCTATTCTGGCGT
CGCTTCTTCTTGGGGGGTTGCTGACGGCCGTCTTTGTTGCCTTGCCAAGAGGCAGGTTGTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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