Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06132
Gene name
Locationscaffold_07:1353873..1354875
Strand-
Gene length (bp)1002
Transcript length (bp)711
Coding sequence length (bp)711
Protein length (aa) 237

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01479 S4 S4 domain 3.7E-12 150 193
PF00163 Ribosomal_S4 Ribosomal protein S4/S9 N-terminal domain 2.6E-10 52 149

GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0019843 rRNA binding Yes
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5112 0.4745 0.0679 0.0367 0.3202 0.0347 0.1263 0.0286 0.0237 0.0272

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup1953
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5282
Ophiocordyceps australis map64 (Brazil) OphauB2|5046
Ophiocordyceps camponoti-floridani Ophcf2|06132 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|4422
Ophiocordyceps kimflemingae Ophio5|5021
Ophiocordyceps subramaniannii Hirsu2|2101

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06132
MEAPAHHTVPRDSNLRNFTPQALIQHFSFLAATRHHQPSSAEQARMPPRAYSKTSRTPRRPFEAARLDSELKLVG
EYGLRNKREVWRVGLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKIEDFLER
RLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVRLDSQKHIDFSLKSPFGSGRAGRVKRKKAKAAEA
AAEGEEEEEDE*
Coding >Ophcf2|06132
ATGGAAGCTCCGGCTCACCACACCGTTCCACGTGATTCGAACCTGCGAAACTTCACCCCACAAGCCCTCATCCAA
CATTTCAGCTTCCTCGCAGCAACCCGTCATCACCAGCCATCGTCAGCGGAACAAGCAAGAATGCCTCCCCGCGCC
TATTCCAAGACCTCTCGTACCCCCCGCAGACCCTTCGAGGCTGCCCGACTTGACTCTGAATTGAAGCTCGTCGGA
GAATATGGTCTGCGCAACAAGCGTGAGGTCTGGCGCGTCGGCCTGACGCTGTCCAAGATTCGTCGTGCTGCTCGT
CAGCTTCTTACCCTCGACGAGAAGGACCCAAAGCGTCTCTTTGAAGGCAATGCCCTCATTCGCCGTCTGGTCCGC
GTGGGCGTCCTCGACGAGTCTCGCATGAAGCTCGATTACGTCCTGGCCCTGAAGATTGAGGATTTCCTCGAGCGT
CGTCTGCAGACGTGCGTCTACAAGCTCGGCCTCGCAAAGTCCATCCACCACGCTCGCGTCCTCATCCGTCAGCGC
CACATCCGCGTCGGCAAGCAAATCGTCAACGTCCCTTCCTTCATCGTCCGTCTCGACTCTCAGAAGCACATCGAC
TTCTCGCTGAAGTCGCCTTTCGGAAGCGGTCGCGCTGGCCGCGTCAAGAGAAAGAAGGCCAAGGCTGCCGAGGCT
GCTGCCGAGGGCGAGGAGGAGGAAGAGGACGAGTAG
Transcript >Ophcf2|06132
ATGGAAGCTCCGGCTCACCACACCGTTCCACGTGATTCGAACCTGCGAAACTTCACCCCACAAGCCCTCATCCAA
CATTTCAGCTTCCTCGCAGCAACCCGTCATCACCAGCCATCGTCAGCGGAACAAGCAAGAATGCCTCCCCGCGCC
TATTCCAAGACCTCTCGTACCCCCCGCAGACCCTTCGAGGCTGCCCGACTTGACTCTGAATTGAAGCTCGTCGGA
GAATATGGTCTGCGCAACAAGCGTGAGGTCTGGCGCGTCGGCCTGACGCTGTCCAAGATTCGTCGTGCTGCTCGT
CAGCTTCTTACCCTCGACGAGAAGGACCCAAAGCGTCTCTTTGAAGGCAATGCCCTCATTCGCCGTCTGGTCCGC
GTGGGCGTCCTCGACGAGTCTCGCATGAAGCTCGATTACGTCCTGGCCCTGAAGATTGAGGATTTCCTCGAGCGT
CGTCTGCAGACGTGCGTCTACAAGCTCGGCCTCGCAAAGTCCATCCACCACGCTCGCGTCCTCATCCGTCAGCGC
CACATCCGCGTCGGCAAGCAAATCGTCAACGTCCCTTCCTTCATCGTCCGTCTCGACTCTCAGAAGCACATCGAC
TTCTCGCTGAAGTCGCCTTTCGGAAGCGGTCGCGCTGGCCGCGTCAAGAGAAAGAAGGCCAAGGCTGCCGAGGCT
GCTGCCGAGGGCGAGGAGGAGGAAGAGGACGAGTAG
Gene >Ophcf2|06132
ATGGAAGCTCCGTGGACTTGAAGGTTGTTTTCGAGACTTGCGTCGCCTTGTGTGATGGGAGCTTAGGTAATCTCA
CTTTTTTTCATCGCCCCTCTCTGGACGTGCTGGAGCTTTAGGGCTCACCACACCGTTCCACGTGATTCGAACCTG
CGAAACTTCACCCCACAAGCCCTCATCCAACATTTCAGCTTCCTCGCAGCAACCCGTCATCACCAGCCATCGTCA
GCGGAACAAGCAAGGTAAGTCTCGCCACGACCCTGCATCGAAATCACGCGCTGATAACTCCCTCAGAATGCCTCC
CCGCGCCTATTCCAAGACCTCTCGTACCCCCCGCAGACCCTTCGAGGCTGCCCGACTGTCAGTATCACCGGCCAC
TGAGCACGAGCTTGCCTCTGCTCAAGTCGATTGTGATAGTCCGACTGACAGGTGCGCGGGACAGTGACTCTGAAT
TGAAGCTCGTCGGAGAATATGGTCTGCGCAACAAGCGTGAGGTCTGGCGCGTCGGCCTGACGCTGTCCAAGATTC
GTCGTGCTGCTCGGTAAGAAGGCCTCGTTGATAAAGTGGCGGCCACGTAACTGACGGCTTCGCAGTCAGCTTCTT
ACCCTCGACGAGAAGGACCCAAAGCGTCTCTTTGAAGGCAATGCCCTCATTCGCCGTCTGGTCCGCGTGGGCGTC
CTCGACGAGTCTCGCATGAAGCTCGATTACGTCCTGGCCCTGAAGATTGAGGATTTCCTCGAGCGTCGTCTGCAG
ACGTGCGTCTACAAGCTCGGCCTCGCAAAGTCCATCCACCACGCTCGCGTCCTCATCCGTCAGCGCCACATCCGC
GTCGGCAAGCAAATCGTCAACGTCCCTTCCTTCATCGTCCGTCTCGACTCTCAGAAGCACATCGACTTCTCGCTG
AAGTCGCCTTTCGGAAGCGGTCGCGCTGGCCGCGTCAAGAGAAAGAAGGCCAAGGCTGCCGAGGCTGCTGCCGAG
GGCGAGGAGGAGGAAGAGGACGAGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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