Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06104
Gene name
Locationscaffold_07:1258210..1259352
Strand-
Gene length (bp)1142
Transcript length (bp)966
Coding sequence length (bp)966
Protein length (aa) 322

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01269 Fibrillarin Fibrillarin 1.4E-98 81 317

GO

GO Term Description Terminal node
GO:0006364 rRNA processing Yes
GO:0008168 methyltransferase activity Yes
GO:0003723 RNA binding Yes
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No
GO:0044237 cellular metabolic process No
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0006396 RNA processing No
GO:0009987 cellular process No
GO:0003676 nucleic acid binding No
GO:1901363 heterocyclic compound binding No
GO:0008152 metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0016740 transferase activity No
GO:0034660 ncRNA metabolic process No
GO:0071704 organic substance metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0003824 catalytic activity No
GO:1901360 organic cyclic compound metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0044238 primary metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0003674 molecular_function No
GO:0090304 nucleic acid metabolic process No
GO:0016072 rRNA metabolic process No
GO:0034470 ncRNA processing No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.412 0.8468 0.0999 0.0932 0.22 0.0184 0.0219 0.0087 0.0129 0.0

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup1285
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2163
Ophiocordyceps australis map64 (Brazil) OphauB2|656
Ophiocordyceps camponoti-floridani Ophcf2|06104 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|5978
Ophiocordyceps kimflemingae Ophio5|7762
Ophiocordyceps subramaniannii Hirsu2|10580

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06104
MGIGFRGAPRGGGGMRGGRGGRGSFGGGDRGGRGGARGGRGGPRGAPRGGFARGGGRGGRGGRGGARGGKPGMGR
GNKVVIEPHRHPGVFVVRGGKEDGIATRNLVSNESVYGEKRISHDDVVKNEDGTTTTNKVEYRMWNPFRSKLCAA
IAGGADEIYMRPGSRVLYLGAASGTSVSHVADLVGPTGYVYAVEFSSRSGRDLIAMASKRTNVVPIVEDARQPAR
YRMIVPMVDVIFADVAQPDQARIVGVNAHWFLKTGGGVLISIKANCIDSTAPPAEVFANEVNKMRAEQIKPKFQL
TLEPFERDHCLVAGEYQRYKS*
Coding >Ophcf2|06104
ATGGGAATCGGGTTTCGAGGAGCCCCCCGGGGCGGCGGCGGCATGAGGGGAGGTCGCGGCGGTCGCGGTAGTTTT
GGAGGTGGTGATCGAGGTGGTCGCGGTGGTGCGCGCGGTGGTCGAGGTGGTCCCCGAGGCGCTCCTCGAGGCGGC
TTTGCACGAGGTGGTGGCCGTGGAGGTCGCGGAGGCCGAGGCGGTGCCCGAGGAGGAAAGCCTGGCATGGGCAGG
GGCAACAAAGTCGTGATTGAGCCGCATCGTCACCCGGGCGTCTTTGTCGTTCGAGGCGGCAAGGAAGATGGCATC
GCGACGCGTAATCTGGTTTCCAACGAGTCTGTCTACGGCGAGAAGCGCATATCCCACGATGATGTTGTCAAAAAC
GAGGATGGGACGACGACGACGAACAAGGTCGAGTACCGGATGTGGAATCCGTTTCGCAGCAAGCTTTGTGCCGCC
ATCGCCGGAGGCGCGGATGAGATTTACATGCGGCCCGGCTCGCGCGTGCTATATCTCGGCGCCGCTTCTGGCACA
TCAGTGTCGCACGTCGCCGATCTTGTTGGCCCGACGGGCTATGTCTACGCCGTCGAGTTCTCGTCAAGGTCTGGC
CGCGATCTGATCGCCATGGCCTCGAAGAGAACGAACGTGGTGCCCATCGTCGAAGACGCCCGCCAGCCCGCTCGC
TACCGGATGATCGTCCCCATGGTCGACGTCATCTTCGCCGACGTCGCCCAGCCCGATCAGGCCCGTATCGTGGGC
GTCAATGCTCACTGGTTCCTCAAGACCGGCGGCGGCGTGCTCATCTCCATCAAGGCCAACTGCATCGACTCGACC
GCCCCTCCGGCCGAGGTCTTTGCTAACGAGGTCAACAAGATGAGGGCGGAACAAATCAAGCCCAAGTTCCAGTTG
ACGCTCGAACCCTTCGAGCGCGATCACTGCCTGGTCGCGGGAGAGTATCAGCGCTACAAGTCATGA
Transcript >Ophcf2|06104
ATGGGAATCGGGTTTCGAGGAGCCCCCCGGGGCGGCGGCGGCATGAGGGGAGGTCGCGGCGGTCGCGGTAGTTTT
GGAGGTGGTGATCGAGGTGGTCGCGGTGGTGCGCGCGGTGGTCGAGGTGGTCCCCGAGGCGCTCCTCGAGGCGGC
TTTGCACGAGGTGGTGGCCGTGGAGGTCGCGGAGGCCGAGGCGGTGCCCGAGGAGGAAAGCCTGGCATGGGCAGG
GGCAACAAAGTCGTGATTGAGCCGCATCGTCACCCGGGCGTCTTTGTCGTTCGAGGCGGCAAGGAAGATGGCATC
GCGACGCGTAATCTGGTTTCCAACGAGTCTGTCTACGGCGAGAAGCGCATATCCCACGATGATGTTGTCAAAAAC
GAGGATGGGACGACGACGACGAACAAGGTCGAGTACCGGATGTGGAATCCGTTTCGCAGCAAGCTTTGTGCCGCC
ATCGCCGGAGGCGCGGATGAGATTTACATGCGGCCCGGCTCGCGCGTGCTATATCTCGGCGCCGCTTCTGGCACA
TCAGTGTCGCACGTCGCCGATCTTGTTGGCCCGACGGGCTATGTCTACGCCGTCGAGTTCTCGTCAAGGTCTGGC
CGCGATCTGATCGCCATGGCCTCGAAGAGAACGAACGTGGTGCCCATCGTCGAAGACGCCCGCCAGCCCGCTCGC
TACCGGATGATCGTCCCCATGGTCGACGTCATCTTCGCCGACGTCGCCCAGCCCGATCAGGCCCGTATCGTGGGC
GTCAATGCTCACTGGTTCCTCAAGACCGGCGGCGGCGTGCTCATCTCCATCAAGGCCAACTGCATCGACTCGACC
GCCCCTCCGGCCGAGGTCTTTGCTAACGAGGTCAACAAGATGAGGGCGGAACAAATCAAGCCCAAGTTCCAGTTG
ACGCTCGAACCCTTCGAGCGCGATCACTGCCTGGTCGCGGGAGAGTATCAGCGCTACAAGTCATGA
Gene >Ophcf2|06104
ATGGGAATCGGGTTTCGAGGAGCCCCCCGGGGCGGCGGCGGCATGAGGGGAGGTCGCGGCGGTCGCGGTAGTTTT
GGAGGTGGTGATCGAGGTGGTCGCGGTGGTGCGCGCGGTGGTCGAGGTCAGTTGTCTTCGGCTCTTCTGCTCAGA
TATCAGTCGCGCTGACTTGACGATATCAGGTGGTCCCCGAGGCGCTCCTCGAGGCGGCTTTGCACGAGGTGGTGG
CCGTGGAGGTCGCGGAGGCCGAGGCGGTGCCCGAGGAGGAAAGCCTGGCATGGGCAGGGGCAACAAAGTCGTGAT
TGTGAGTCCCGCCTCGAGGCTTTGAGACCTCCATCAAAATTGTTCTCTAATCGAAAACAGGAGCCGCATCGTCAC
CCGGGCGTCTTTGTCGTTCGAGGCGGCAAGGAAGATGGCATCGCGACGCGTAATCTGGTTTCCAACGAGTCTGTC
TACGGCGAGAAGCGCATATCCCACGATGATGTTGTCAAAAACGAGGATGGGACGACGACGACGAACAAGGTCGAG
TACCGGATGTGGAATCCGTTTCGCAGCAAGCTTTGTGCCGCCATCGCCGGAGGCGCGGATGAGATTTACATGCGG
CCCGGCTCGCGCGTGCTATATCTCGGCGCCGCTTCTGGCACATCAGTGTCGCACGTCGCCGATCTTGTTGGCCCG
ACGGGCTATGTCTACGCCGTCGAGTTCTCGTCAAGGTCTGGCCGCGATCTGATCGCCATGGCCTCGAAGAGAACG
AACGTGGTGCCCATCGTCGAAGACGCCCGCCAGCCCGCTCGCTACCGGATGATCGTCCCCATGGTCGACGTCATC
TTCGCCGACGTCGCCCAGCCCGATCAGGCCCGTATCGTGGGCGTCAATGCTCACTGGTTCCTCAAGACCGGCGGC
GGCGTGCTCATCTCCATCAAGGCCAACTGCATCGACTCGACCGCCCCTCCGGCCGAGGTCTTTGCTAACGAGGTC
AACAAGATGAGGGCGGAACAAATCAAGCCCAAGTTCCAGTTGACGCTCGGTAAGTCTCCCCTTTGGACGTCCTGT
CCACGTGCTTTGCTAAAACCTCGCCGCGTCTAGAACCCTTCGAGCGCGATCACTGCCTGGTCGCGGGAGAGTATC
AGCGCTACAAGTCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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