Protein ID | Ophcf2|06094 |
Gene name | |
Location | scaffold_07:1223553..1224516 |
Strand | + |
Gene length (bp) | 963 |
Transcript length (bp) | 909 |
Coding sequence length (bp) | 909 |
Protein length (aa) | 303 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 5.7E-52 | 27 | 276 |
PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 1.3E-15 | 31 | 284 |
PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 4.3E-11 | 31 | 144 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 37 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 41.64 | 21.04 | 62.25 |
Alive | In ants, during behavior modification | 213.03 | 118.39 | 307.68 |
Dead | In ants, recently dead | 79.12 | 44.00 | 114.24 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.000238 | yes |
Alive | Dead | 0.000238 | yes |
Dead | Fungus | 0.001226 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06094 MASIDESTFEHGDSSFYSKTWTPHGAIKAKLVFVHGFSEHINRYNDFFPKLAKHGIQVLSWDQRGWGRSASKSWQ KGRTGPTAEVIADVAAFVREKLVESDEASRVPVFVMGHSMGGGQVLTLAGDDNYADLVGRVRGWILESPFVGFPP GGEPSSVTVFAGRLMGRLLPKQQMKHAVAAELLTRDLDIVKSVRDDPLCHDTGTLEGLASMLDRAENLSSGRVRL GKHVRSVLLTHGTKDMVCCCDAAVRFVDGQDAVEDKTWKLYDGAYHQLHTDHCKDDFARDVAEWILKRSDEQVEA KL* |
Coding | >Ophcf2|06094 ATGGCGAGCATTGACGAGTCGACCTTTGAGCATGGAGATTCCAGCTTCTACTCCAAGACGTGGACGCCACACGGC GCCATCAAGGCCAAGCTGGTATTCGTGCACGGCTTCAGCGAGCACATCAACCGCTATAACGATTTCTTCCCCAAG CTGGCCAAACACGGCATCCAGGTACTGTCCTGGGATCAGCGCGGATGGGGCCGCAGCGCAAGCAAGTCGTGGCAG AAGGGCCGGACGGGTCCGACAGCCGAGGTGATTGCCGACGTGGCAGCCTTTGTGCGCGAAAAGCTGGTGGAATCG GACGAAGCGTCGCGGGTGCCCGTCTTCGTCATGGGCCACTCCATGGGCGGAGGCCAGGTTCTGACGCTGGCGGGT GACGATAACTACGCTGACCTGGTGGGACGCGTGCGAGGCTGGATACTCGAGAGCCCCTTTGTTGGCTTCCCTCCA GGCGGAGAGCCCAGCAGCGTGACCGTCTTCGCTGGCCGGCTCATGGGCCGACTTCTACCCAAGCAGCAGATGAAG CACGCCGTGGCAGCCGAGTTGCTAACGCGAGACCTGGACATCGTCAAGTCTGTGCGCGACGACCCTCTATGCCAC GACACGGGTACGCTCGAAGGACTCGCCTCGATGTTGGACCGAGCAGAGAACCTCTCCTCCGGCCGAGTCCGGCTC GGGAAGCACGTGCGCAGCGTGCTGCTGACGCATGGAACAAAGGACATGGTTTGCTGCTGCGACGCGGCTGTTCGG TTCGTCGATGGCCAGGATGCTGTTGAGGATAAGACGTGGAAGCTGTATGACGGCGCGTATCATCAGCTTCATACT GATCACTGTAAGGATGATTTTGCGAGGGATGTGGCTGAGTGGATCTTGAAGCGGAGTGATGAGCAGGTCGAGGCC AAGTTGTGA |
Transcript | >Ophcf2|06094 ATGGCGAGCATTGACGAGTCGACCTTTGAGCATGGAGATTCCAGCTTCTACTCCAAGACGTGGACGCCACACGGC GCCATCAAGGCCAAGCTGGTATTCGTGCACGGCTTCAGCGAGCACATCAACCGCTATAACGATTTCTTCCCCAAG CTGGCCAAACACGGCATCCAGGTACTGTCCTGGGATCAGCGCGGATGGGGCCGCAGCGCAAGCAAGTCGTGGCAG AAGGGCCGGACGGGTCCGACAGCCGAGGTGATTGCCGACGTGGCAGCCTTTGTGCGCGAAAAGCTGGTGGAATCG GACGAAGCGTCGCGGGTGCCCGTCTTCGTCATGGGCCACTCCATGGGCGGAGGCCAGGTTCTGACGCTGGCGGGT GACGATAACTACGCTGACCTGGTGGGACGCGTGCGAGGCTGGATACTCGAGAGCCCCTTTGTTGGCTTCCCTCCA GGCGGAGAGCCCAGCAGCGTGACCGTCTTCGCTGGCCGGCTCATGGGCCGACTTCTACCCAAGCAGCAGATGAAG CACGCCGTGGCAGCCGAGTTGCTAACGCGAGACCTGGACATCGTCAAGTCTGTGCGCGACGACCCTCTATGCCAC GACACGGGTACGCTCGAAGGACTCGCCTCGATGTTGGACCGAGCAGAGAACCTCTCCTCCGGCCGAGTCCGGCTC GGGAAGCACGTGCGCAGCGTGCTGCTGACGCATGGAACAAAGGACATGGTTTGCTGCTGCGACGCGGCTGTTCGG TTCGTCGATGGCCAGGATGCTGTTGAGGATAAGACGTGGAAGCTGTATGACGGCGCGTATCATCAGCTTCATACT GATCACTGTAAGGATGATTTTGCGAGGGATGTGGCTGAGTGGATCTTGAAGCGGAGTGATGAGCAGGTCGAGGCC AAGTTGTGA |
Gene | >Ophcf2|06094 ATGGCGAGCATTGACGAGTCGACCTTTGAGCATGGAGATTCCAGCTTCTACTCCAAGACGTGGACGGTGAGTGGA AGCGAGAACGTTGACAGCTGTGGACGGCGCTGATGCCCAATTCAGCCACACGGCGCCATCAAGGCCAAGCTGGTA TTCGTGCACGGCTTCAGCGAGCACATCAACCGCTATAACGATTTCTTCCCCAAGCTGGCCAAACACGGCATCCAG GTACTGTCCTGGGATCAGCGCGGATGGGGCCGCAGCGCAAGCAAGTCGTGGCAGAAGGGCCGGACGGGTCCGACA GCCGAGGTGATTGCCGACGTGGCAGCCTTTGTGCGCGAAAAGCTGGTGGAATCGGACGAAGCGTCGCGGGTGCCC GTCTTCGTCATGGGCCACTCCATGGGCGGAGGCCAGGTTCTGACGCTGGCGGGTGACGATAACTACGCTGACCTG GTGGGACGCGTGCGAGGCTGGATACTCGAGAGCCCCTTTGTTGGCTTCCCTCCAGGCGGAGAGCCCAGCAGCGTG ACCGTCTTCGCTGGCCGGCTCATGGGCCGACTTCTACCCAAGCAGCAGATGAAGCACGCCGTGGCAGCCGAGTTG CTAACGCGAGACCTGGACATCGTCAAGTCTGTGCGCGACGACCCTCTATGCCACGACACGGGTACGCTCGAAGGA CTCGCCTCGATGTTGGACCGAGCAGAGAACCTCTCCTCCGGCCGAGTCCGGCTCGGGAAGCACGTGCGCAGCGTG CTGCTGACGCATGGAACAAAGGACATGGTTTGCTGCTGCGACGCGGCTGTTCGGTTCGTCGATGGCCAGGATGCT GTTGAGGATAAGACGTGGAAGCTGTATGACGGCGCGTATCATCAGCTTCATACTGATCACTGTAAGGATGATTTT GCGAGGGATGTGGCTGAGTGGATCTTGAAGCGGAGTGATGAGCAGGTCGAGGCCAAGTTGTGA |