Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06092
Gene name
Locationscaffold_07:1216955..1218103
Strand-
Gene length (bp)1148
Transcript length (bp)1041
Coding sequence length (bp)1041
Protein length (aa) 347

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05739 SNARE SNARE domain 1.2E-15 285 337

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 323 340 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06092
MWRDRTNLYLSYRQSYAHHPAQRRRTQAGGASAAFSDAYPGSGSGHGDDDRRRLLSAGAFDDDGDAVIEMDRLPP
RWVDVSDEVNDLLADIATKSQRLEQLHQKHVLPRFDDDAAKKNEEAQIEKLTQEITKSFHDCHKCIQRVERMVRD
ARDSGTLGRADDVMAKNIQIALATRVQESSASFRKKQSAYLKKLRDMSGLGSLSPAERSSTPQPGSHLRASLQES
DADRVFSQSTLQAASQQKLLHSNDAVIAQREREIEDIAQGIIELSDLFQDLQTMVIDQGTMLDRIDYNVERMNED
VKGADKELKVASGYQRRTAKRKIMLLLILLIVGLFILLLIKPKKHN*
Coding >Ophcf2|06092
ATGTGGCGAGACCGCACCAACCTCTACCTCTCCTACCGCCAGTCGTACGCGCATCACCCTGCACAGCGGAGAAGG
ACACAAGCGGGCGGCGCGTCAGCCGCCTTCTCTGACGCCTACCCGGGGTCCGGATCCGGCCATGGAGACGACGAT
CGCCGCCGTCTGCTCTCGGCCGGCGCATTTGATGACGATGGCGACGCCGTTATCGAGATGGATCGACTGCCGCCC
CGTTGGGTTGACGTCTCCGACGAGGTCAACGACTTACTCGCCGACATCGCCACCAAGAGCCAGCGGCTAGAGCAG
CTCCATCAGAAACACGTCTTGCCCAGATTCGATGACGACGCCGCCAAGAAGAACGAAGAGGCGCAGATAGAGAAG
CTCACCCAAGAAATAACAAAAAGTTTCCATGACTGCCACAAATGCATCCAGCGCGTCGAGCGAATGGTCCGCGAC
GCGAGGGACTCGGGAACACTCGGCCGCGCGGACGATGTCATGGCGAAGAACATACAGATTGCCTTGGCCACCCGC
GTCCAAGAATCTAGCGCAAGTTTCCGCAAGAAGCAGAGCGCGTATTTGAAGAAGCTTCGCGACATGAGCGGCTTG
GGATCCTTGAGTCCGGCCGAACGGTCTTCCACACCCCAACCAGGCTCTCATCTGCGCGCTTCATTGCAGGAATCC
GACGCCGACAGGGTCTTCTCTCAGTCCACGTTGCAGGCGGCCTCGCAGCAAAAGCTGCTTCACTCCAACGACGCC
GTCATCGCACAGAGAGAACGCGAGATAGAAGACATTGCTCAAGGAATTATCGAGCTATCAGACCTGTTTCAAGAC
CTCCAGACCATGGTGATCGACCAGGGGACCATGCTGGACAGAATCGACTACAACGTAGAGCGGATGAACGAGGAC
GTCAAGGGTGCCGACAAAGAACTCAAGGTCGCGTCGGGATACCAGAGAAGAACGGCCAAGAGAAAGATTATGCTT
CTTCTCATACTCCTCATCGTCGGTCTCTTCATTCTGTTATTAATCAAACCGAAGAAGCACAATTGA
Transcript >Ophcf2|06092
ATGTGGCGAGACCGCACCAACCTCTACCTCTCCTACCGCCAGTCGTACGCGCATCACCCTGCACAGCGGAGAAGG
ACACAAGCGGGCGGCGCGTCAGCCGCCTTCTCTGACGCCTACCCGGGGTCCGGATCCGGCCATGGAGACGACGAT
CGCCGCCGTCTGCTCTCGGCCGGCGCATTTGATGACGATGGCGACGCCGTTATCGAGATGGATCGACTGCCGCCC
CGTTGGGTTGACGTCTCCGACGAGGTCAACGACTTACTCGCCGACATCGCCACCAAGAGCCAGCGGCTAGAGCAG
CTCCATCAGAAACACGTCTTGCCCAGATTCGATGACGACGCCGCCAAGAAGAACGAAGAGGCGCAGATAGAGAAG
CTCACCCAAGAAATAACAAAAAGTTTCCATGACTGCCACAAATGCATCCAGCGCGTCGAGCGAATGGTCCGCGAC
GCGAGGGACTCGGGAACACTCGGCCGCGCGGACGATGTCATGGCGAAGAACATACAGATTGCCTTGGCCACCCGC
GTCCAAGAATCTAGCGCAAGTTTCCGCAAGAAGCAGAGCGCGTATTTGAAGAAGCTTCGCGACATGAGCGGCTTG
GGATCCTTGAGTCCGGCCGAACGGTCTTCCACACCCCAACCAGGCTCTCATCTGCGCGCTTCATTGCAGGAATCC
GACGCCGACAGGGTCTTCTCTCAGTCCACGTTGCAGGCGGCCTCGCAGCAAAAGCTGCTTCACTCCAACGACGCC
GTCATCGCACAGAGAGAACGCGAGATAGAAGACATTGCTCAAGGAATTATCGAGCTATCAGACCTGTTTCAAGAC
CTCCAGACCATGGTGATCGACCAGGGGACCATGCTGGACAGAATCGACTACAACGTAGAGCGGATGAACGAGGAC
GTCAAGGGTGCCGACAAAGAACTCAAGGTCGCGTCGGGATACCAGAGAAGAACGGCCAAGAGAAAGATTATGCTT
CTTCTCATACTCCTCATCGTCGGTCTCTTCATTCTGTTATTAATCAAACCGAAGAAGCACAATTGA
Gene >Ophcf2|06092
ATGTGGCGAGACCGCACCAACCTGTCCGTTCCCGTCTCCTCACCAAGTTACAAGACTGACTCGGCCATCTTCAAG
CTACCTCTCCTACCGCCAGTCGTACGCGCATCACCCTGCACAGCGGAGAAGGACACAAGCGGGCGGCGCGTCAGC
CGCCTTCTCTGACGCCTACCCGGGGTCCGGATCCGGCCATGGAGACGACGATCGCCGCCGTCTGCTCTCGGCCGG
CGCATTTGATGACGATGGCGACGCCGTTATCGAGATGGATCGACTGCCGCCCCGTTGGGTTGACGTCTCCGACGA
GGTCAACGACTTACTCGCCGACATCGCCACCAAGAGCCAGCGGCTAGAGCAGCTCCATCAGAAACACGTCTTGCC
CAGATTCGATGACGACGCCGCCAAGAAGAACGAAGAGGCGCAGATAGAGAAGCTCACCCAAGAAATAACAAAAAG
TTTCCATGACTGCCACAAATGCATCCAGCGCGTCGAGCGAATGGTCCGCGACGCGAGGGACTCGGGAACACTCGG
CCGCGCGGACGATGTCATGGCGAAGAACATACAGATTGCCTTGGCCACCCGCGTCCAAGAATCTAGCGCAAGTTT
CCGCAAGAAGCAGAGCGCGTATTTGAAGAGTATGTTGAACCTTTACCCGATCCTAATTGGCCCTCTGCTCATGCC
TCGTATCAGAGCTTCGCGACATGAGCGGCTTGGGATCCTTGAGTCCGGCCGAACGGTCTTCCACACCCCAACCAG
GCTCTCATCTGCGCGCTTCATTGCAGGAATCCGACGCCGACAGGGTCTTCTCTCAGTCCACGTTGCAGGCGGCCT
CGCAGCAAAAGCTGCTTCACTCCAACGACGCCGTCATCGCACAGAGAGAACGCGAGATAGAAGACATTGCTCAAG
GAATTATCGAGCTATCAGACCTGTTTCAAGACCTCCAGACCATGGTGATCGACCAGGGGACCATGCTGGACAGAA
TCGACTACAACGTAGAGCGGATGAACGAGGACGTCAAGGGTGCCGACAAAGAACTCAAGGTCGCGTCGGGATACC
AGAGAAGAACGGCCAAGAGAAAGATTATGCTTCTTCTCATACTCCTCATCGTCGGTCTCTTCATTCTGTTATTAA
TCAAACCGAAGAAGCACAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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