Protein ID | Ophcf2|06090 |
Gene name | |
Location | scaffold_07:1213425..1213862 |
Strand | - |
Gene length (bp) | 437 |
Transcript length (bp) | 213 |
Coding sequence length (bp) | 213 |
Protein length (aa) | 71 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02238 | COX7a | Cytochrome c oxidase subunit VII | 1.0E-19 | 8 | 62 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 43 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 36 | 58 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06090 MGLIDKKNHVIDHQRYYQNAFQAHTRLWRINPRSRIYLVPFQVLVWGSLGATLYAAGRKVCGYNTWFSKN* |
Coding | >Ophcf2|06090 ATGGGTCTAATCGACAAGAAGAACCATGTGATTGATCACCAGCGCTACTACCAGAATGCCTTTCAGGCGCATACT CGCCTCTGGAGGATTAATCCACGATCTCGCATATACCTGGTGCCCTTCCAAGTCTTGGTCTGGGGCAGCTTGGGA GCTACATTGTACGCCGCTGGTCGCAAGGTCTGTGGCTACAACACATGGTTCAGCAAGAATTAA |
Transcript | >Ophcf2|06090 ATGGGTCTAATCGACAAGAAGAACCATGTGATTGATCACCAGCGCTACTACCAGAATGCCTTTCAGGCGCATACT CGCCTCTGGAGGATTAATCCACGATCTCGCATATACCTGGTGCCCTTCCAAGTCTTGGTCTGGGGCAGCTTGGGA GCTACATTGTACGCCGCTGGTCGCAAGGTCTGTGGCTACAACACATGGTTCAGCAAGAATTAA |
Gene | >Ophcf2|06090 ATGGGGTATGTCTCTGAATCTCGCGCAGCTTCCAGAGTCTATTCGTGACAATCCCTGCCCGCCGCTCAGGGTTCC CGATCGCGCGTTGCCGCCAGTCCGCCAACAGCACGCTGACGGAGGAACAGTCTAATCGACAAGAAGAACCATGTG ATTGATCACCAGCGCTACTACCAGAATGCCTTTCAGGCGCATACTCGCCTCTGGAGGATTGTACGGCCGCAGAGC GGGAGCTGATGAGGCCATAAAATTGACAAGGTTTCTAGAATCCACGATCTCGCATATACCTGGTGCCCTTCCAAG TCTTGGTCTGGGGCAGCTTGGGAGGTTTGTCTCAAGGCTCGCTTGCGCTTTCTTCTCATTCTAACGGGCTCACAG CTACATTGTACGCCGCTGGTCGCAAGGTCTGTGGCTACAACACATGGTTCAGCAAGAATTAA |