Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06077
Gene name
Locationscaffold_07:1179120..1179747
Strand+
Gene length (bp)627
Transcript length (bp)453
Coding sequence length (bp)453
Protein length (aa) 151

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01124 MAPEG MAPEG family 8.9E-22 15 141

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.5

Transmembrane Domains

Domain # Start End Length
1 10 27 17
2 79 101 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06077
MAIPLELPDQYGLVLAAATSTFFVNTMHAFRTMKFRKASGVEYPQSYATNEQAAKNPSAYRFNCAQRAHHNFTEN
HTSLLGALLIAGIRYPVPAAALGAGWSLSRIMYLLGYTSSAGPRGRLLGAIGGNLSDLFLKLAAAYSSAMFVLGK
*
Coding >Ophcf2|06077
ATGGCGATTCCTCTTGAACTCCCTGATCAGTATGGCCTGGTGCTCGCGGCCGCCACGAGTACTTTCTTCGTCAAT
ACAATGCACGCCTTCCGCACCATGAAGTTCCGCAAAGCCAGCGGAGTCGAATATCCTCAAAGCTACGCCACCAAC
GAACAGGCGGCCAAGAATCCGTCCGCCTACCGATTCAACTGCGCTCAACGAGCTCACCACAACTTTACCGAGAAC
CACACATCTCTTCTCGGCGCTTTGCTCATCGCTGGTATTCGCTATCCTGTTCCTGCGGCCGCCCTCGGAGCTGGA
TGGAGCTTGTCGAGAATTATGTACCTGCTCGGCTATACCAGCTCTGCCGGCCCTCGCGGCCGACTGCTCGGTGCC
ATTGGCGGCAATCTGAGCGACTTGTTCCTCAAACTAGCCGCGGCCTACTCATCTGCCATGTTCGTTCTTGGCAAA
TAG
Transcript >Ophcf2|06077
ATGGCGATTCCTCTTGAACTCCCTGATCAGTATGGCCTGGTGCTCGCGGCCGCCACGAGTACTTTCTTCGTCAAT
ACAATGCACGCCTTCCGCACCATGAAGTTCCGCAAAGCCAGCGGAGTCGAATATCCTCAAAGCTACGCCACCAAC
GAACAGGCGGCCAAGAATCCGTCCGCCTACCGATTCAACTGCGCTCAACGAGCTCACCACAACTTTACCGAGAAC
CACACATCTCTTCTCGGCGCTTTGCTCATCGCTGGTATTCGCTATCCTGTTCCTGCGGCCGCCCTCGGAGCTGGA
TGGAGCTTGTCGAGAATTATGTACCTGCTCGGCTATACCAGCTCTGCCGGCCCTCGCGGCCGACTGCTCGGTGCC
ATTGGCGGCAATCTGAGCGACTTGTTCCTCAAACTAGCCGCGGCCTACTCATCTGCCATGTTCGTTCTTGGCAAA
TAG
Gene >Ophcf2|06077
ATGGCGATTCCTCTTGAACTCCCTGATCAGTATGGGTCAGTGAGAGAGAGGACCTTGGAATATCGTTCCATGAGA
GATGGCTAACAGCTGCCTATCCTTCAGCCTGGTGCTCGCGGCCGCCACGAGTACTTTCTTCGTCAATACAATGCA
CGCCTTCCGCACCATGAAGTTCCGCAAAGCCAGCGGAGTCGAATATCCTCAAAGCTACGCCACCAACGAACAGGC
GGCCAAGAATCCGTCCGCCTACCGATTCAACTGCGGTCCGTTGCCTGTCTTGTTCCCCAGCCGTTCGTCACTGAT
ACTTGACCAGCTCAACGAGCTCACCACAACTTTACCGAGAACCACACATCTCTTCTCGGCGCTTTGCTCATCGCT
GGTATTCGCTATCCTGTTCCTGCGGCCGCCCTCGGAGCTGGATGGAGCTTGTCGAGAATTATGTACCTGCTCGGC
TATACCAGCTCTGCCGGCCCTCGCGGCCGACTGCTGTATGTCCTTTTTTTTTCATGCTTGTCGTCAGCCGAACCG
AACTAATGCGTCTTCAGCGGTGCCATTGGCGGCAATCTGAGCGACTTGTTCCTCAAACTAGCCGCGGCCTACTCA
TCTGCCATGTTCGTTCTTGGCAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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