Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06054
Gene name
Locationscaffold_07:516165..517200
Strand-
Gene length (bp)1035
Transcript length (bp)921
Coding sequence length (bp)921
Protein length (aa) 307

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 213 235 22
2 278 300 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06054
MPAYRKASDRPSNNSTIRLIWNQDEHGDGLADLEKHNRPHPSRSIMYSLFTSSDRNLHSSCSSRSNSISHTIPAW
AKLYYGSGERRFLASALSSDSLFSDFNSRSRGSSFLSRSPSAERYPAAIRSPRRRPLQAMSQRRHNDTVTGHDGG
VENNEPPPSSFGPRRLREQTSSIWSPHLRRDKRAYGYKLWDSPSTVWSANESLLSRRRVQPTLFAVGFLCPLAWV
IAAFLPLPPMPRPKTIQEHLSASQAETQLEANLTLDMSDVRLYSHARWWRTLNRAMSVVGTFVVGAIIALIVTGV
RQRWRS*
Coding >Ophcf2|06054
ATGCCTGCATATCGGAAGGCCTCTGACCGGCCGTCAAATAACAGCACTATCAGGCTGATCTGGAACCAGGACGAG
CATGGCGATGGCCTCGCCGACCTGGAGAAGCACAACCGTCCCCATCCCTCGCGATCCATAATGTATAGTCTCTTC
ACCTCGTCCGATCGAAACTTGCATTCCTCTTGCAGCTCTCGCAGCAACAGCATCAGTCATACCATTCCGGCTTGG
GCCAAGCTGTACTATGGCAGCGGTGAGCGCCGGTTCCTGGCCTCGGCACTGTCGTCGGATTCATTGTTTTCCGAT
TTCAACAGCCGGTCCCGAGGCAGTTCGTTCCTCAGCAGGTCGCCCAGCGCCGAGAGATATCCCGCAGCCATCCGA
AGCCCCCGACGACGCCCGCTTCAGGCCATGTCCCAGAGGAGACACAATGACACGGTCACGGGACACGATGGGGGC
GTCGAAAACAATGAGCCTCCTCCCAGCTCCTTCGGGCCTAGGAGGCTGAGAGAACAGACGTCGAGTATCTGGTCT
CCTCATTTGCGCCGGGATAAGCGAGCATATGGTTACAAGCTCTGGGATTCTCCCTCGACCGTGTGGTCTGCCAAC
GAATCTCTATTGAGTCGCCGCCGAGTGCAACCTACTCTTTTTGCAGTGGGCTTCCTATGTCCGTTGGCCTGGGTC
ATTGCAGCCTTTCTCCCTCTTCCGCCCATGCCTCGGCCGAAGACGATTCAGGAGCATCTCAGCGCCAGTCAGGCC
GAAACTCAGCTTGAGGCCAACCTGACGCTCGACATGTCCGACGTTCGCCTCTACAGCCATGCTCGTTGGTGGAGA
ACACTCAACAGAGCCATGTCCGTAGTCGGCACCTTTGTCGTCGGGGCCATCATTGCTCTCATAGTTACGGGGGTG
CGTCAGAGATGGAGATCCTGA
Transcript >Ophcf2|06054
ATGCCTGCATATCGGAAGGCCTCTGACCGGCCGTCAAATAACAGCACTATCAGGCTGATCTGGAACCAGGACGAG
CATGGCGATGGCCTCGCCGACCTGGAGAAGCACAACCGTCCCCATCCCTCGCGATCCATAATGTATAGTCTCTTC
ACCTCGTCCGATCGAAACTTGCATTCCTCTTGCAGCTCTCGCAGCAACAGCATCAGTCATACCATTCCGGCTTGG
GCCAAGCTGTACTATGGCAGCGGTGAGCGCCGGTTCCTGGCCTCGGCACTGTCGTCGGATTCATTGTTTTCCGAT
TTCAACAGCCGGTCCCGAGGCAGTTCGTTCCTCAGCAGGTCGCCCAGCGCCGAGAGATATCCCGCAGCCATCCGA
AGCCCCCGACGACGCCCGCTTCAGGCCATGTCCCAGAGGAGACACAATGACACGGTCACGGGACACGATGGGGGC
GTCGAAAACAATGAGCCTCCTCCCAGCTCCTTCGGGCCTAGGAGGCTGAGAGAACAGACGTCGAGTATCTGGTCT
CCTCATTTGCGCCGGGATAAGCGAGCATATGGTTACAAGCTCTGGGATTCTCCCTCGACCGTGTGGTCTGCCAAC
GAATCTCTATTGAGTCGCCGCCGAGTGCAACCTACTCTTTTTGCAGTGGGCTTCCTATGTCCGTTGGCCTGGGTC
ATTGCAGCCTTTCTCCCTCTTCCGCCCATGCCTCGGCCGAAGACGATTCAGGAGCATCTCAGCGCCAGTCAGGCC
GAAACTCAGCTTGAGGCCAACCTGACGCTCGACATGTCCGACGTTCGCCTCTACAGCCATGCTCGTTGGTGGAGA
ACACTCAACAGAGCCATGTCCGTAGTCGGCACCTTTGTCGTCGGGGCCATCATTGCTCTCATAGTTACGGGGGTG
CGTCAGAGATGGAGATCCTGA
Gene >Ophcf2|06054
ATGCCTGCATATCGGAAGGCCTCTGACCGGCCGTCAAATAACAGCACTATCAGGCTGATCTGGAACCAGGACGAG
CATGGCGATGGCCTCGCCGACCTGGAGAAGCACAACCGTCCCCATCCCTCGCGATCCATAATGTATAGTCTCTTC
ACCTCGTCCGATCGAAACTTGCATTCCTCTTGCAGCTCTCGCAGCAACAGCATCAGTCATACCATTCCGGCTTGG
GCCAAGTGAGAAAGCCAACCGTCTCTTGGTTCCCTTCTTTGGTGACTGACTGTCGTAACAGGCTGTACTATGGCA
GCGGTGAGCGCCGGTTCCTGGCCTCGGCACTGTCGTCGGATTCATTGTTTTCCGATTTCAACAGCCGGTCCCGAG
GCAGTTCGTTCCTCAGCAGGTCGCCCAGCGCCGAGAGATATCCCGCAGCCATCCGAAGCCCCCGACGACGCCCGC
TTCAGGCCATGTCCCAGAGGAGACACAATGACACGGTCACGGGACACGATGGGGGCGTCGAAAACAATGAGCCTC
CTCCCAGCTCCTTCGGGCCTAGGAGGCTGAGAGAACAGACGTCGAGTATCTGGTCTCCTCATTTGCGCCGGGATA
AGCGAGCATATGGTTACAAGCTCTGGGATTCTCCCTCGACCGTGTGGTCTGCCAACGAATCTCTATTGAGTCGCC
GCCGAGTGCAACCTACTCTTTTTGCAGTGGGCTTCCTATGTCCGTTGGGTGAGCTTCGTCGTCTTCCGCCATGTC
GAATTGACTGACGAGCCACGTGCATCATTAGCCTGGGTCATTGCAGCCTTTCTCCCTCTTCCGCCCATGCCTCGG
CCGAAGACGATTCAGGAGCATCTCAGCGCCAGTCAGGCCGAAACTCAGCTTGAGGCCAACCTGACGCTCGACATG
TCCGACGTTCGCCTCTACAGCCATGCTCGTTGGTGGAGAACACTCAACAGAGCCATGTCCGTAGTCGGCACCTTT
GTCGTCGGGGCCATCATTGCTCTCATAGTTACGGGGGTGCGTCAGAGATGGAGATCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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