Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06040
Gene name
Locationscaffold_07:471897..472995
Strand-
Gene length (bp)1098
Transcript length (bp)1044
Coding sequence length (bp)1044
Protein length (aa) 348

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04116 FA_hydroxylase Fatty acid hydroxylase 2.1E-25 169 295

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0008610 lipid biosynthetic process Yes
GO:0005506 iron ion binding Yes
GO:0006629 lipid metabolic process No
GO:0043169 cation binding No
GO:0005488 binding No
GO:0009058 biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0046872 metal ion binding No
GO:0003674 molecular_function No
GO:0008150 biological_process No
GO:0043167 ion binding No
GO:0003824 catalytic activity No
GO:0008152 metabolic process No
GO:0046914 transition metal ion binding No
GO:0044238 primary metabolic process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 82 104 22
2 160 182 22
3 231 253 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 145.49 83.76 207.22
Alive In ants, during behavior modification 115.18 65.13 165.23
Dead In ants, recently dead 202.58 112.58 292.57

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.241555 no
Alive Dead 0.000657 yes
Dead Fungus 0.080987 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06040
MDVVLELTDTFITDYAYAYLFPARQAPYDFPEAAAVNGSEKTFSPWTYAPASHFIQIQPSQAAYKTSLPRDNPLR
QLVTLFFITWIFGIMVYFLFATLSYYLIFDKRTLNHPKFIRNQIWLEIVQANKSMPIMAIFTAPLFFLEVRGYGR
LYDTTDQGPGMWYNVMQFPLFLLFTDFCIYWIHRFLHHPLIYKRIHKPHHKWIMPTPYASHAFHPLDGFAQSLPY
HFFPFIFPLQKMAYVVLFVFVNFWSILIHDGEYLTNNPVVNGAACHSLHHSRFEVNYGQFFTAFDRLGGTYRMPE
AWMFEREKKMSEKQWKQESKTVDGFVKEIEGADERTYGPELAAKKMK*
Coding >Ophcf2|06040
ATGGACGTGGTGCTCGAGCTCACAGACACCTTCATCACCGACTATGCCTACGCATATCTCTTCCCCGCCCGTCAA
GCCCCGTATGACTTCCCCGAAGCTGCGGCGGTCAATGGCTCTGAGAAGACGTTTTCGCCCTGGACATATGCGCCA
GCCTCCCACTTCATTCAGATCCAGCCGTCGCAGGCCGCATACAAGACGTCGCTGCCCCGGGACAACCCCCTTCGC
CAGCTCGTCACCTTGTTCTTCATCACATGGATCTTTGGCATCATGGTCTATTTCCTCTTTGCCACCCTCTCCTAC
TACCTCATCTTCGATAAGCGCACTCTCAACCACCCCAAATTCATCCGCAATCAGATATGGCTCGAGATCGTCCAG
GCCAACAAGTCGATGCCCATCATGGCCATCTTCACCGCTCCCCTCTTCTTTCTCGAGGTTCGTGGCTACGGTCGA
CTCTATGACACGACGGACCAGGGGCCGGGCATGTGGTACAACGTGATGCAGTTTCCCCTGTTCCTCTTGTTTACC
GACTTTTGCATCTACTGGATTCATCGTTTTCTTCACCACCCTCTCATCTATAAGCGCATCCACAAGCCTCACCAC
AAATGGATCATGCCGACGCCCTATGCGAGCCATGCCTTTCACCCGCTCGACGGCTTCGCCCAATCGCTTCCCTAC
CATTTCTTCCCTTTCATCTTTCCCCTGCAAAAGATGGCTTACGTCGTGCTCTTCGTCTTTGTCAACTTCTGGTCC
ATCCTCATCCACGACGGGGAATACCTCACCAACAACCCCGTCGTCAACGGCGCCGCATGCCACTCGCTGCATCAC
TCTCGCTTCGAGGTTAACTATGGCCAGTTCTTCACTGCCTTTGATCGCCTCGGCGGTACCTACCGCATGCCCGAG
GCCTGGATGTTCGAGAGGGAGAAGAAGATGTCGGAGAAGCAGTGGAAGCAAGAGTCCAAGACGGTCGACGGCTTT
GTCAAAGAGATTGAAGGCGCGGACGAGCGTACATACGGACCCGAATTGGCTGCCAAGAAGATGAAGTGA
Transcript >Ophcf2|06040
ATGGACGTGGTGCTCGAGCTCACAGACACCTTCATCACCGACTATGCCTACGCATATCTCTTCCCCGCCCGTCAA
GCCCCGTATGACTTCCCCGAAGCTGCGGCGGTCAATGGCTCTGAGAAGACGTTTTCGCCCTGGACATATGCGCCA
GCCTCCCACTTCATTCAGATCCAGCCGTCGCAGGCCGCATACAAGACGTCGCTGCCCCGGGACAACCCCCTTCGC
CAGCTCGTCACCTTGTTCTTCATCACATGGATCTTTGGCATCATGGTCTATTTCCTCTTTGCCACCCTCTCCTAC
TACCTCATCTTCGATAAGCGCACTCTCAACCACCCCAAATTCATCCGCAATCAGATATGGCTCGAGATCGTCCAG
GCCAACAAGTCGATGCCCATCATGGCCATCTTCACCGCTCCCCTCTTCTTTCTCGAGGTTCGTGGCTACGGTCGA
CTCTATGACACGACGGACCAGGGGCCGGGCATGTGGTACAACGTGATGCAGTTTCCCCTGTTCCTCTTGTTTACC
GACTTTTGCATCTACTGGATTCATCGTTTTCTTCACCACCCTCTCATCTATAAGCGCATCCACAAGCCTCACCAC
AAATGGATCATGCCGACGCCCTATGCGAGCCATGCCTTTCACCCGCTCGACGGCTTCGCCCAATCGCTTCCCTAC
CATTTCTTCCCTTTCATCTTTCCCCTGCAAAAGATGGCTTACGTCGTGCTCTTCGTCTTTGTCAACTTCTGGTCC
ATCCTCATCCACGACGGGGAATACCTCACCAACAACCCCGTCGTCAACGGCGCCGCATGCCACTCGCTGCATCAC
TCTCGCTTCGAGGTTAACTATGGCCAGTTCTTCACTGCCTTTGATCGCCTCGGCGGTACCTACCGCATGCCCGAG
GCCTGGATGTTCGAGAGGGAGAAGAAGATGTCGGAGAAGCAGTGGAAGCAAGAGTCCAAGACGGTCGACGGCTTT
GTCAAAGAGATTGAAGGCGCGGACGAGCGTACATACGGACCCGAATTGGCTGCCAAGAAGATGAAGTGA
Gene >Ophcf2|06040
ATGGACGTGGTGCTCGAGCTCACAGACACCTTCATCACCGACTATGCCTACGCATATCTCTTCCCCGCCCGTCAA
GCCCCGTATGACTTCCCCGAAGCTGCGGCGGTCAATGGCTCTGAGAAGACGTTTTCGCCCTGGACATATGCGCCA
GCCTCCCACTTCATTCAGATCCAGCCGTCGCAGGCCGCATACAAGACGTCGCTGCCCCGGGACAACCCCCTTCGC
CAGCTCGTCACCTTGTTCTTCATCACATGGTACCGGTTCCTCTGTTTCTCGGGCCGCTACTTGAGCTGACGCGAC
GTCTGCAGGATCTTTGGCATCATGGTCTATTTCCTCTTTGCCACCCTCTCCTACTACCTCATCTTCGATAAGCGC
ACTCTCAACCACCCCAAATTCATCCGCAATCAGATATGGCTCGAGATCGTCCAGGCCAACAAGTCGATGCCCATC
ATGGCCATCTTCACCGCTCCCCTCTTCTTTCTCGAGGTTCGTGGCTACGGTCGACTCTATGACACGACGGACCAG
GGGCCGGGCATGTGGTACAACGTGATGCAGTTTCCCCTGTTCCTCTTGTTTACCGACTTTTGCATCTACTGGATT
CATCGTTTTCTTCACCACCCTCTCATCTATAAGCGCATCCACAAGCCTCACCACAAATGGATCATGCCGACGCCC
TATGCGAGCCATGCCTTTCACCCGCTCGACGGCTTCGCCCAATCGCTTCCCTACCATTTCTTCCCTTTCATCTTT
CCCCTGCAAAAGATGGCTTACGTCGTGCTCTTCGTCTTTGTCAACTTCTGGTCCATCCTCATCCACGACGGGGAA
TACCTCACCAACAACCCCGTCGTCAACGGCGCCGCATGCCACTCGCTGCATCACTCTCGCTTCGAGGTTAACTAT
GGCCAGTTCTTCACTGCCTTTGATCGCCTCGGCGGTACCTACCGCATGCCCGAGGCCTGGATGTTCGAGAGGGAG
AAGAAGATGTCGGAGAAGCAGTGGAAGCAAGAGTCCAAGACGGTCGACGGCTTTGTCAAAGAGATTGAAGGCGCG
GACGAGCGTACATACGGACCCGAATTGGCTGCCAAGAAGATGAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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