© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophcf2|06020 |
| Gene name | |
| Location | scaffold_07:420248..423310 |
| Strand | + |
| Gene length (bp) | 3062 |
| Transcript length (bp) | 2073 |
| Coding sequence length (bp) | 2073 |
| Protein length (aa) | 691 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 6.2E-19 | 47 | 243 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005615 | extracellular space | Yes |
| GO:0090729 | toxin activity | Yes |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1791 | 0.139 | 0.7839 | 0.1269 | 0.2854 | 0.1351 | 0.3225 | 0.3319 | 0.2687 | 0.0367 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 21 | 0.999555 |
| Orthofinder run ID | 4 |
| Orthogroup | 2 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|06020 MKPLQLPLFTAVLSLLTQTQAISSPDNPHPPETPSDKPEFVWRGEKEKRSPEDVKRAGGFRAIGLNSMLRGGVPT EMEREMGSSLYAHTAGFDLGATLYVSTTTDPLVAAGFAHIRSDTPGYVYLIHTDSRFIDVEASLKESVLFPYDKE HVAVGLISWDQVVGWFDLKDSEFMSFLISLRNPDDHLAAPEMEGFHRNPDFNGKYLSEMGTGGQPQLAGFSRSAV YWEREPWLSFRGQSAADNLEAYVRKHIHVPVGDEGIWQWALKTLEEDYIPFIDEAEAGGLSAAEERALSCCEIAR RSLVDKRDCVPCRSNQDGSNMDENEILSLARENSKDKFTILLHQFGYEAVATHQPQLHDQLTMLFERVRQSPRLN RIKNFSAHYGGQVVKAGGLLVYGTAVADSFTHEAGVLDRAAVVTSILPFIGCTVRVADDASKGRVDVASASFCFV EDGLILAGLWEFGLAWQTLLGVAETLQGVEEQDRLYDPDVFRTKRLQGWESKIREVEAFIGSDEFMSNVTSRYDA HQIGLLFQASQLAGDLHAVHHVIQTPRSYPSEKLAVRAHRMVRIAMDHDMEKQICIEAARNKIKVREALHTSMLN ATRKLAMDYDDDFFRRYWLQATSPVPFISLFSISPPATNVEELRNELDFQRRNVPLPSFEHRIVAAVDRVIERLD TPATCLCRQGNSSCF* |
| Coding | >Ophcf2|06020 ATGAAACCCCTACAACTACCCCTCTTCACAGCAGTCCTCTCCCTCCTAACCCAAACGCAAGCCATCTCCTCCCCG GACAACCCTCACCCACCCGAAACCCCGTCCGACAAGCCAGAGTTCGTCTGGCGAGGCGAGAAAGAGAAGCGATCC CCCGAAGACGTCAAGCGAGCCGGCGGCTTCCGCGCCATCGGCCTCAACAGCATGCTTAGAGGCGGCGTCCCCACT GAGATGGAGCGCGAGATGGGGAGCAGTCTCTACGCTCATACCGCCGGCTTCGATCTCGGGGCCACGCTGTATGTT TCTACAACGACGGATCCGTTGGTCGCTGCTGGCTTTGCCCACATTCGCTCTGATACGCCCGGTTACGTCTATCTG ATTCATACGGATTCCAGGTTCATCGATGTTGAGGCGTCGTTGAAGGAGTCTGTGCTATTTCCCTATGATAAGGAG CACGTGGCCGTCGGGCTTATTTCCTGGGATCAGGTCGTGGGTTGGTTCGATCTCAAGGATTCTGAATTCATGAGC TTTCTCATCAGTCTTCGAAACCCGGACGACCATCTGGCAGCCCCAGAGATGGAGGGCTTCCACCGAAACCCAGAC TTCAATGGAAAGTACCTCTCCGAGATGGGCACAGGCGGCCAGCCACAACTAGCCGGCTTCTCCAGGTCGGCCGTC TACTGGGAGCGGGAGCCCTGGCTGAGCTTCCGCGGCCAGTCGGCGGCTGATAACCTCGAGGCTTACGTCCGGAAA CATATTCACGTTCCGGTTGGAGACGAGGGCATCTGGCAGTGGGCTCTGAAGACGTTGGAGGAGGATTATATCCCG TTTATAGACGAGGCTGAGGCTGGTGGTCTGTCGGCTGCCGAGGAAAGAGCTCTATCGTGCTGTGAGATTGCCAGG AGGAGCCTCGTTGACAAGAGGGATTGTGTCCCTTGTCGATCTAATCAAGATGGCTCGAATATGGACGAAAACGAA ATCCTATCCCTCGCAAGAGAGAACTCCAAAGACAAATTCACTATTCTCCTTCACCAATTCGGCTACGAAGCCGTA GCAACACACCAGCCGCAACTCCACGACCAACTGACCATGCTCTTCGAAAGGGTCCGTCAAAGTCCACGCCTAAAC CGCATCAAGAACTTCTCCGCCCATTACGGCGGTCAGGTCGTCAAAGCCGGCGGACTTCTCGTCTACGGGACAGCC GTGGCCGATTCCTTCACGCACGAGGCTGGTGTTCTGGATAGGGCGGCCGTCGTGACGTCGATTCTACCTTTTATT GGCTGTACTGTTCGGGTTGCTGATGATGCTTCAAAGGGCAGGGTTGATGTGGCCAGCGCTTCGTTTTGCTTTGTG GAGGATGGTCTTATCCTTGCTGGTCTGTGGGAGTTTGGCCTTGCGTGGCAGACGCTTCTTGGCGTTGCAGAGACG CTTCAGGGTGTTGAAGAGCAGGACAGGTTATACGACCCAGACGTCTTCAGGACGAAACGTCTTCAAGGCTGGGAG AGCAAGATTCGAGAGGTGGAAGCCTTTATCGGATCGGACGAGTTTATGAGCAACGTCACTTCCCGCTACGATGCT CATCAGATCGGTCTCTTGTTCCAGGCTTCTCAGCTGGCGGGCGACTTACACGCCGTCCATCACGTCATCCAGACT CCCCGATCGTATCCCTCCGAGAAGCTTGCCGTTCGGGCGCATCGCATGGTTCGAATCGCCATGGATCATGACATG GAGAAGCAGATCTGCATCGAAGCGGCGCGGAACAAGATCAAGGTCCGTGAGGCACTGCACACGAGCATGCTCAAC GCTACCAGGAAGTTGGCCATGGATTACGACGACGACTTCTTCAGAAGATACTGGCTTCAGGCCACGAGCCCCGTC CCCTTCATCAGCTTATTCTCCATCAGCCCGCCAGCCACCAACGTCGAGGAACTACGCAACGAGCTAGACTTTCAA AGACGCAACGTCCCACTCCCCTCATTCGAACATCGGATAGTCGCAGCCGTCGACAGAGTCATCGAGCGGCTTGAT ACACCGGCTACTTGTCTGTGCCGGCAAGGAAACAGCAGCTGCTTCTGA |
| Transcript | >Ophcf2|06020 ATGAAACCCCTACAACTACCCCTCTTCACAGCAGTCCTCTCCCTCCTAACCCAAACGCAAGCCATCTCCTCCCCG GACAACCCTCACCCACCCGAAACCCCGTCCGACAAGCCAGAGTTCGTCTGGCGAGGCGAGAAAGAGAAGCGATCC CCCGAAGACGTCAAGCGAGCCGGCGGCTTCCGCGCCATCGGCCTCAACAGCATGCTTAGAGGCGGCGTCCCCACT GAGATGGAGCGCGAGATGGGGAGCAGTCTCTACGCTCATACCGCCGGCTTCGATCTCGGGGCCACGCTGTATGTT TCTACAACGACGGATCCGTTGGTCGCTGCTGGCTTTGCCCACATTCGCTCTGATACGCCCGGTTACGTCTATCTG ATTCATACGGATTCCAGGTTCATCGATGTTGAGGCGTCGTTGAAGGAGTCTGTGCTATTTCCCTATGATAAGGAG CACGTGGCCGTCGGGCTTATTTCCTGGGATCAGGTCGTGGGTTGGTTCGATCTCAAGGATTCTGAATTCATGAGC TTTCTCATCAGTCTTCGAAACCCGGACGACCATCTGGCAGCCCCAGAGATGGAGGGCTTCCACCGAAACCCAGAC TTCAATGGAAAGTACCTCTCCGAGATGGGCACAGGCGGCCAGCCACAACTAGCCGGCTTCTCCAGGTCGGCCGTC TACTGGGAGCGGGAGCCCTGGCTGAGCTTCCGCGGCCAGTCGGCGGCTGATAACCTCGAGGCTTACGTCCGGAAA CATATTCACGTTCCGGTTGGAGACGAGGGCATCTGGCAGTGGGCTCTGAAGACGTTGGAGGAGGATTATATCCCG TTTATAGACGAGGCTGAGGCTGGTGGTCTGTCGGCTGCCGAGGAAAGAGCTCTATCGTGCTGTGAGATTGCCAGG AGGAGCCTCGTTGACAAGAGGGATTGTGTCCCTTGTCGATCTAATCAAGATGGCTCGAATATGGACGAAAACGAA ATCCTATCCCTCGCAAGAGAGAACTCCAAAGACAAATTCACTATTCTCCTTCACCAATTCGGCTACGAAGCCGTA GCAACACACCAGCCGCAACTCCACGACCAACTGACCATGCTCTTCGAAAGGGTCCGTCAAAGTCCACGCCTAAAC CGCATCAAGAACTTCTCCGCCCATTACGGCGGTCAGGTCGTCAAAGCCGGCGGACTTCTCGTCTACGGGACAGCC GTGGCCGATTCCTTCACGCACGAGGCTGGTGTTCTGGATAGGGCGGCCGTCGTGACGTCGATTCTACCTTTTATT GGCTGTACTGTTCGGGTTGCTGATGATGCTTCAAAGGGCAGGGTTGATGTGGCCAGCGCTTCGTTTTGCTTTGTG GAGGATGGTCTTATCCTTGCTGGTCTGTGGGAGTTTGGCCTTGCGTGGCAGACGCTTCTTGGCGTTGCAGAGACG CTTCAGGGTGTTGAAGAGCAGGACAGGTTATACGACCCAGACGTCTTCAGGACGAAACGTCTTCAAGGCTGGGAG AGCAAGATTCGAGAGGTGGAAGCCTTTATCGGATCGGACGAGTTTATGAGCAACGTCACTTCCCGCTACGATGCT CATCAGATCGGTCTCTTGTTCCAGGCTTCTCAGCTGGCGGGCGACTTACACGCCGTCCATCACGTCATCCAGACT CCCCGATCGTATCCCTCCGAGAAGCTTGCCGTTCGGGCGCATCGCATGGTTCGAATCGCCATGGATCATGACATG GAGAAGCAGATCTGCATCGAAGCGGCGCGGAACAAGATCAAGGTCCGTGAGGCACTGCACACGAGCATGCTCAAC GCTACCAGGAAGTTGGCCATGGATTACGACGACGACTTCTTCAGAAGATACTGGCTTCAGGCCACGAGCCCCGTC CCCTTCATCAGCTTATTCTCCATCAGCCCGCCAGCCACCAACGTCGAGGAACTACGCAACGAGCTAGACTTTCAA AGACGCAACGTCCCACTCCCCTCATTCGAACATCGGATAGTCGCAGCCGTCGACAGAGTCATCGAGCGGCTTGAT ACACCGGCTACTTGTCTGTGCCGGCAAGGAAACAGCAGCTGCTTCTGA |
| Gene | >Ophcf2|06020 ATGAAACCCCTACAACTACCCCTCTTCACAGCAGTCCTCTCCCTCCTAACCCAAACGCAAGCCATCTCCTCCCCG GACAACCCTCACCCACCCGAAACCCCGTCCGACAAGCCAGAGTTCGTCTGGCGAGGCGAGAAAGAGAAGCGATCC CCCGAAGACGTCAAGCGAGCCGGCGGCTTCCGCGCCATCGGCCTCAACAGCATGCTTAGAGGCGGCGTCCCCACT GAGATGGAGCGCGAGATGGGGAGCAGTCTCTACGCTCATACCGCCGGCTTCGATCTCGGGGCCACGCTGTATGTT TCTACAACGACGGATCCGTTGGTCGCTGCTGGCTTTGCCCACATTCGCTCTGATACGCCCGGTTACGTCTATCTG ATTCATACGGATTCCAGGTTCATCGATGTTGAGGCGTCGTTGAAGGAGTCTGTGCTATTTCCCTATGATAAGGAG CACGTGGCCGTCGGGCTTATTTCCTGGGATCAGGTCGTGGGTTGGTTCGATCTCAAGGATTCTGAATTCATGAGC TTTCTCATCAGTCTTCGAAACCCGGACGACCATCTGGCAGCCCCAGAGATGGAGGGCTTCCACCGAAACCCAGAC TTCAATGGAAAGTACCTCTCCGAGATGGGCACAGGCGGCCAGCCACAACTAGCCGGCTTCTCCAGGTCGGCCGTC TACTGGGAGCGGGAGCCCTGGCTGAGCTTCCGCGGCCAGTCGGCGGCTGATAACCTCGAGGCTTACGTCCGGAAA CATATTCACGTTCCGGTTGGAGACGAGGGCATCTGGCAGTGGGCTCTGAAGACGTTGGAGGAGGATTATATCCCG TTTATAGACGAGGCTGAGGCTGGTGGTCTGTCGGCTGCCGAGGAAAGAGCTCTATCGTGCTGTGAGATTGCCAGG AGGAGCCTCGTTGACAAGAGGGATTGTGTCCCTTGTCGATCTAATCAAGATGGCTCGAATATGGACGAAAACGAA ATCCTATCCCTCGCAAGAGAGAACTCCAAAGACAAATTCACTATTCTCCTTCACCAATTCGGCTACGAAGCCGTA GCAACACACCAGCCGCAACTCCACGACCAACTGACCATGCTCTTCGAAAGGGTCCGTCAAAGTCCACGCCTAAAC CGCATCAAGAACTTCTCCGCCCATTACGGCGGTCAGGTCGTCAAAGCCGGCGGACTTCTCGTCTACGGGACAGCC GTGGCCGATTCCTTCACGCACGAGGCTGGTGTTCTGGATAGGGCGGCCGTCGTGACGTCGATTCTACCTTTTATT GGCTGTACTGTTCGGGTTGCTGATGATGCTTCAAAGGGCAGGGTTGATGTGGCCAGCGCTTCGTTTTGCTTTGTG GAGGATGGTCTTATCCTTGCTGGTCTGTGGGAGTTTGGCCTTGCGTGGCAGACGCTTCTTGGCGTTGCAGAGACG CTTCAGGGTGTTGAAGAGCAGGACAGGTTATACGACCCAGACGTCTTCAGGACGAAACGTCTTCAAGGCTGGGAG AGCAAGATTCGAGAGGTGGAAGCCTTTATCGGATCGGACGAGTTTATGAGCAACGTCACTTCCCGCTACGATGCT CATCAGATCGGTCTCTTGTTCCAGGCTTCTCAGCTGGCGGGCGACTTACACGCCGTCCATCACGTCATCCAGACT CCCCGATCGTATCCCTCCGAGAAGCTTGCCGTTCGGGCGCATCGCATGGTTCGAATCGCCATGGATCATGACATG GAGAAGCAGATCTGCATCGAAGCGGCGCGGAACAAGATCAAGGTCCGTGAGGCACTGCACACGAGCATGCTCAAC GCTACCAGGAAGTTGGCCATGGATTACGACGACGACTTCTTCAGAAGATACTGGCTTCAGGCCACGAGCCCCGTC CCCTTCATCAGCTTATTCTCCATCAGCCCGCCAGCCACCAACGTCGAGGAACTACGCAACGAGCTAGACTTTCAA AGACGCAACGTCCCACTCCCCTCATTCGAACATCGGATAGTCGCAGCCGTCGACAGAGTCATCGAGCGGCTTGAT ACACCGGCTACTTGTCTGTGCCGGCAAGGAAACAGCAGCTGTGAGTTTGCAGACTGCGCGAGCCCGCCTGCTGCT GTGGGGCAGGTGGATGTCGGGGGGAGGGCGTTGCTGGGTAGTTTCTTGTCTTTGCGCGGGGACGAGTTTTCGGCC GAGTGCAGGGCGCGGTTTATGCCTTGTTGGAGGAGGGCTTTGAAGGGGAGGGGGTTGGGGCGGTTGGGGTTGAGC CGAGACAGATGTGGTGTAGGGCTGGGGCTTAGATGGGGAATGAGTAGCGGTTTTTTTTGTTTGTTTGTTTGTTTG TTTGAGAGGCGGATGGATGAGGGTAGATTTGGTCATGGTTCGCTTGGTAGTGGTAGTGAGCTGGTTGGTTGGTTG GTTGGTTGGTTGGCTGGTTGGTTGCCGAGTTAGTTGATTGGCTTGACGTGCTAGCTGATTGGTTGGTTGTTTGAT TGGCTGGTTGGTTGATTGAGTTGTTCCTGGTTTGCTACCCTTGACTCGCAACACCGCCTACATACCCATATACAT ACATACATCCATCACACGTCTCCATCCGTCGCGTCTCCACCCAGACAGATATCACGCATCTCGCCTCCACAAGAC ATGCGCCAAGCTCATTATCGCCCAATCAGCGGTTGCACGATTGACCTCGCGGTAGCACAGACTGGAGAACCAGCC ACTCGCCTGCAGACGCGTCGTCCAATCAACGATCGGTCTGAATTTTCCCCTCACGGCTATCTGTGACGCGTACAA GCAACGAAAATATCAACGAGGACAACCGAAAGAGAATACAATTACTATTGATTGTCGATGACTTGAAGATGATGC GCGTTGGCATCTACTGTCTACGCCTATGGGTGTATCATACGAATACCCTATAACGACAACCGCCGAGCGCATCAA CTGCTCTATTAATACAACAACCGAGCGCACCGGCGCGTCGGACGAAGAAGATTTTCCGTTGCCCATCTCGACGCA GCGAAGACGGAGCAACGAAGAATTTGATCACAACGCAACATCGAACTACAATAGGCTTCTGA |