Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06019
Gene name
Locationscaffold_07:418124..418463
Strand-
Gene length (bp)339
Transcript length (bp)339
Coding sequence length (bp)339
Protein length (aa) 113

Overview

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PFAM Domains

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0713 0.0529 0.9584 0.0626 0.0763 0.0157 0.0372 0.1059 0.0396 0.0135

SignalP

SignalP signal predicted Location Score
Yes 1 - 16 0.999666

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5753
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|06019 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|6640
Ophiocordyceps kimflemingae Ophio5|6304
Ophiocordyceps subramaniannii Hirsu2|9275
Ophiocordyceps subramaniannii Hirsu2|947

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06019
MHSLKFLVVAIAGALAAPSIDHVSTYESAFDKSGLVRRGATYGQVCGQNRIAHCCKDVEKKKGSNGLIPIDLGRC
SRIQVLSDLIHGSCNGQVCCSGNMRGLVNLQCTDVQL*
Coding >Ophcf2|06019
ATGCACTCCCTCAAGTTCCTCGTCGTCGCCATCGCCGGTGCCCTCGCCGCTCCCTCCATCGACCACGTCAGCACC
TACGAGTCCGCCTTCGACAAGTCCGGCCTCGTCCGCCGTGGCGCCACCTACGGCCAAGTCTGCGGCCAGAACCGC
ATCGCCCACTGCTGCAAGGATGTCGAGAAGAAGAAGGGAAGCAACGGCCTGATCCCCATCGATCTCGGCCGCTGC
AGCCGGATTCAGGTCCTGTCTGATCTGATTCATGGCAGCTGCAACGGTCAGGTCTGCTGCTCCGGAAACATGAGG
GGCCTCGTCAACCTTCAGTGCACCGACGTCCAGCTTTAG
Transcript >Ophcf2|06019
ATGCACTCCCTCAAGTTCCTCGTCGTCGCCATCGCCGGTGCCCTCGCCGCTCCCTCCATCGACCACGTCAGCACC
TACGAGTCCGCCTTCGACAAGTCCGGCCTCGTCCGCCGTGGCGCCACCTACGGCCAAGTCTGCGGCCAGAACCGC
ATCGCCCACTGCTGCAAGGATGTCGAGAAGAAGAAGGGAAGCAACGGCCTGATCCCCATCGATCTCGGCCGCTGC
AGCCGGATTCAGGTCCTGTCTGATCTGATTCATGGCAGCTGCAACGGTCAGGTCTGCTGCTCCGGAAACATGAGG
GGCCTCGTCAACCTTCAGTGCACCGACGTCCAGCTTTAG
Gene >Ophcf2|06019
ATGCACTCCCTCAAGTTCCTCGTCGTCGCCATCGCCGGTGCCCTCGCCGCTCCCTCCATCGACCACGTCAGCACC
TACGAGTCCGCCTTCGACAAGTCCGGCCTCGTCCGCCGTGGCGCCACCTACGGCCAAGTCTGCGGCCAGAACCGC
ATCGCCCACTGCTGCAAGGATGTCGAGAAGAAGAAGGGAAGCAACGGCCTGATCCCCATCGATCTCGGCCGCTGC
AGCCGGATTCAGGTCCTGTCTGATCTGATTCATGGCAGCTGCAACGGTCAGGTCTGCTGCTCCGGAAACATGAGG
GGCCTCGTCAACCTTCAGTGCACCGACGTCCAGCTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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