Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06014
Gene name
Locationscaffold_07:401417..402792
Strand-
Gene length (bp)1375
Transcript length (bp)1308
Coding sequence length (bp)1308
Protein length (aa) 436

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03388 Lectin_leg-like Legume-like lectin family 1.6E-23 59 234

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 405 423 18

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06014
MRAPAFCAALAALLSATKAFDHIIQDLSFGQTGRISPDGNSRVPNYVLTGHPYQPEQLSNKIILTPVAPGNQRGA
LWAEKPLSRSYFSAHVDFRANGPERGGGNLNVWLVHGGSAVVGSHSIYTVGKFDGLGLVVDAYGGSGGMIRGFLN
DGSVDYSQQHDIDRLAFGHCQFSYRNLGRPTTLSLFQTQHSFRVEVDGHLCFETDHASLPSGNFLGVTAATPDTP
DSFEIFAMVVSSDAPDSHHEHDGAHLGQQKQPGPPAAAAAPNPPHYDQHQHYQQQYKSPSDEPADHFTTSAAQFR
DLHNRLQSLTHHLSSISAELANYDHHNEQRNDQMTKALDALRSRLPAGSDLVARVQDLEKEVRAMRNDMNKGLAS
HHDSFQDYLSDHHNSLAQTMMLSMPGHGKIIFVIIASQAVLAVGYLLYKRRKASSPKKYL*
Coding >Ophcf2|06014
ATGCGAGCCCCGGCCTTCTGCGCCGCGCTGGCCGCCCTCTTGTCCGCCACCAAGGCCTTTGACCACATCATCCAA
GACCTCAGCTTCGGCCAGACAGGCCGAATCAGTCCCGACGGCAACAGCCGAGTGCCCAATTACGTCCTCACAGGC
CACCCCTACCAACCAGAGCAGCTCTCCAACAAAATCATCCTCACGCCCGTCGCGCCAGGAAACCAACGCGGCGCT
CTCTGGGCGGAAAAGCCGCTGTCACGATCTTACTTCTCCGCCCACGTCGACTTTCGAGCCAACGGTCCCGAGCGC
GGCGGCGGGAACCTCAACGTCTGGCTCGTTCACGGAGGCAGCGCCGTCGTCGGCTCCCACAGCATCTACACCGTC
GGCAAGTTCGATGGCTTGGGTCTCGTTGTCGACGCTTACGGCGGTTCGGGAGGCATGATTCGCGGCTTTCTCAAC
GATGGATCTGTCGATTACTCGCAGCAGCATGACATCGATCGCCTCGCCTTTGGCCATTGCCAGTTCTCGTATCGG
AATCTCGGCAGGCCTACCACGCTCAGCTTGTTCCAGACACAGCATTCTTTCCGCGTCGAGGTCGACGGACACCTC
TGCTTCGAGACGGACCACGCAAGCCTCCCGTCGGGCAACTTCCTAGGCGTCACAGCCGCCACGCCCGACACTCCC
GACTCGTTCGAGATCTTCGCCATGGTCGTCTCGTCCGACGCGCCAGACAGCCACCACGAACACGATGGCGCCCAT
CTCGGCCAGCAGAAGCAACCCGGCCCCCCCGCCGCAGCCGCAGCTCCCAACCCCCCCCATTACGACCAGCACCAG
CATTACCAGCAGCAGTACAAGTCGCCATCCGACGAACCGGCCGATCACTTCACCACATCGGCCGCCCAGTTCCGC
GACCTGCACAACCGTCTCCAGTCACTCACCCACCACCTATCCTCCATCTCGGCCGAGCTGGCCAACTACGACCAT
CACAACGAACAGCGCAACGACCAGATGACCAAGGCGCTCGATGCTCTCCGCTCGCGTCTCCCCGCCGGCTCAGAC
CTCGTCGCGCGCGTCCAGGATCTGGAGAAGGAAGTGCGGGCGATGCGCAACGACATGAATAAGGGTCTGGCGTCG
CACCACGACTCCTTCCAGGATTACCTATCAGATCATCACAACTCGCTCGCCCAGACCATGATGCTCTCCATGCCG
GGCCACGGAAAGATCATCTTCGTCATCATCGCTTCGCAGGCTGTCCTCGCCGTCGGATACCTCCTGTACAAGCGA
CGCAAGGCGAGCAGTCCCAAGAAGTATCTGTAA
Transcript >Ophcf2|06014
ATGCGAGCCCCGGCCTTCTGCGCCGCGCTGGCCGCCCTCTTGTCCGCCACCAAGGCCTTTGACCACATCATCCAA
GACCTCAGCTTCGGCCAGACAGGCCGAATCAGTCCCGACGGCAACAGCCGAGTGCCCAATTACGTCCTCACAGGC
CACCCCTACCAACCAGAGCAGCTCTCCAACAAAATCATCCTCACGCCCGTCGCGCCAGGAAACCAACGCGGCGCT
CTCTGGGCGGAAAAGCCGCTGTCACGATCTTACTTCTCCGCCCACGTCGACTTTCGAGCCAACGGTCCCGAGCGC
GGCGGCGGGAACCTCAACGTCTGGCTCGTTCACGGAGGCAGCGCCGTCGTCGGCTCCCACAGCATCTACACCGTC
GGCAAGTTCGATGGCTTGGGTCTCGTTGTCGACGCTTACGGCGGTTCGGGAGGCATGATTCGCGGCTTTCTCAAC
GATGGATCTGTCGATTACTCGCAGCAGCATGACATCGATCGCCTCGCCTTTGGCCATTGCCAGTTCTCGTATCGG
AATCTCGGCAGGCCTACCACGCTCAGCTTGTTCCAGACACAGCATTCTTTCCGCGTCGAGGTCGACGGACACCTC
TGCTTCGAGACGGACCACGCAAGCCTCCCGTCGGGCAACTTCCTAGGCGTCACAGCCGCCACGCCCGACACTCCC
GACTCGTTCGAGATCTTCGCCATGGTCGTCTCGTCCGACGCGCCAGACAGCCACCACGAACACGATGGCGCCCAT
CTCGGCCAGCAGAAGCAACCCGGCCCCCCCGCCGCAGCCGCAGCTCCCAACCCCCCCCATTACGACCAGCACCAG
CATTACCAGCAGCAGTACAAGTCGCCATCCGACGAACCGGCCGATCACTTCACCACATCGGCCGCCCAGTTCCGC
GACCTGCACAACCGTCTCCAGTCACTCACCCACCACCTATCCTCCATCTCGGCCGAGCTGGCCAACTACGACCAT
CACAACGAACAGCGCAACGACCAGATGACCAAGGCGCTCGATGCTCTCCGCTCGCGTCTCCCCGCCGGCTCAGAC
CTCGTCGCGCGCGTCCAGGATCTGGAGAAGGAAGTGCGGGCGATGCGCAACGACATGAATAAGGGTCTGGCGTCG
CACCACGACTCCTTCCAGGATTACCTATCAGATCATCACAACTCGCTCGCCCAGACCATGATGCTCTCCATGCCG
GGCCACGGAAAGATCATCTTCGTCATCATCGCTTCGCAGGCTGTCCTCGCCGTCGGATACCTCCTGTACAAGCGA
CGCAAGGCGAGCAGTCCCAAGAAGTATCTGTAA
Gene >Ophcf2|06014
ATGCGAGCCCCGGCCTTCTGCGCCGCGCTGGCCGCCCTCTTGTCCGCCACCAAGGCCTTTGACCACATCATCCAA
GACCTCAGCTTCGGCCAGACAGGCCGGTCCGTCATCCCTCCTCTCCAATCCTCCAATCATCTCATAACCCGTATC
TCTGACGAAGAAGAACAGAATCAGTCCCGACGGCAACAGCCGAGTGCCCAATTACGTCCTCACAGGCCACCCCTA
CCAACCAGAGCAGCTCTCCAACAAAATCATCCTCACGCCCGTCGCGCCAGGAAACCAACGCGGCGCTCTCTGGGC
GGAAAAGCCGCTGTCACGATCTTACTTCTCCGCCCACGTCGACTTTCGAGCCAACGGTCCCGAGCGCGGCGGCGG
GAACCTCAACGTCTGGCTCGTTCACGGAGGCAGCGCCGTCGTCGGCTCCCACAGCATCTACACCGTCGGCAAGTT
CGATGGCTTGGGTCTCGTTGTCGACGCTTACGGCGGTTCGGGAGGCATGATTCGCGGCTTTCTCAACGATGGATC
TGTCGATTACTCGCAGCAGCATGACATCGATCGCCTCGCCTTTGGCCATTGCCAGTTCTCGTATCGGAATCTCGG
CAGGCCTACCACGCTCAGCTTGTTCCAGACACAGCATTCTTTCCGCGTCGAGGTCGACGGACACCTCTGCTTCGA
GACGGACCACGCAAGCCTCCCGTCGGGCAACTTCCTAGGCGTCACAGCCGCCACGCCCGACACTCCCGACTCGTT
CGAGATCTTCGCCATGGTCGTCTCGTCCGACGCGCCAGACAGCCACCACGAACACGATGGCGCCCATCTCGGCCA
GCAGAAGCAACCCGGCCCCCCCGCCGCAGCCGCAGCTCCCAACCCCCCCCATTACGACCAGCACCAGCATTACCA
GCAGCAGTACAAGTCGCCATCCGACGAACCGGCCGATCACTTCACCACATCGGCCGCCCAGTTCCGCGACCTGCA
CAACCGTCTCCAGTCACTCACCCACCACCTATCCTCCATCTCGGCCGAGCTGGCCAACTACGACCATCACAACGA
ACAGCGCAACGACCAGATGACCAAGGCGCTCGATGCTCTCCGCTCGCGTCTCCCCGCCGGCTCAGACCTCGTCGC
GCGCGTCCAGGATCTGGAGAAGGAAGTGCGGGCGATGCGCAACGACATGAATAAGGGTCTGGCGTCGCACCACGA
CTCCTTCCAGGATTACCTATCAGATCATCACAACTCGCTCGCCCAGACCATGATGCTCTCCATGCCGGGCCACGG
AAAGATCATCTTCGTCATCATCGCTTCGCAGGCTGTCCTCGCCGTCGGATACCTCCTGTACAAGCGACGCAAGGC
GAGCAGTCCCAAGAAGTATCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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