Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05983
Gene name
Locationscaffold_07:314318..315099
Strand-
Gene length (bp)781
Transcript length (bp)621
Coding sequence length (bp)621
Protein length (aa) 207

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 57 76 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05983
MGSAESPDEAPRRRRRGLMAPRVMDLVGPVVKAGTLTGVTGAITGVGIAIAFDKRPVGSGFVMGCEWFALGSTYW
LFRSLAIASMGGEDQVTNKEKVMASGLAGSAGGAVAGLMRGPRAIVPCVVFYGLLTSGGQTMINLVASRPPQPLK
EKRSWLESKWLPFRKVTDEEYMERLGEKILRVEADIAICDERIARLKGAAARGGEK*
Coding >Ophcf2|05983
ATGGGCTCGGCCGAATCCCCGGATGAGGCGCCCCGGCGACGGCGGCGCGGCTTGATGGCCCCACGCGTCATGGAC
CTCGTCGGACCCGTAGTCAAGGCCGGCACGCTGACCGGAGTTACCGGTGCTATTACAGGCGTCGGCATCGCCATC
GCCTTTGACAAGCGGCCCGTCGGCAGCGGCTTCGTCATGGGTTGCGAATGGTTCGCCCTGGGGTCTACATACTGG
CTATTCAGATCGTTGGCCATTGCGTCAATGGGGGGTGAAGATCAAGTCACGAACAAGGAAAAGGTCATGGCCAGC
GGGCTGGCTGGTTCTGCTGGGGGCGCCGTCGCCGGCCTGATGCGCGGTCCACGAGCCATTGTTCCCTGTGTCGTC
TTTTACGGTCTGCTGACCAGCGGCGGCCAGACGATGATCAACCTCGTGGCGAGCCGTCCACCTCAACCACTAAAG
GAGAAGCGCAGCTGGCTCGAGTCCAAGTGGCTACCCTTCCGTAAGGTGACGGACGAAGAGTACATGGAGAGGCTC
GGCGAGAAGATCCTGCGGGTCGAGGCAGACATTGCCATCTGCGACGAGAGAATTGCGCGGCTCAAGGGGGCAGCA
GCACGAGGCGGAGAGAAGTGA
Transcript >Ophcf2|05983
ATGGGCTCGGCCGAATCCCCGGATGAGGCGCCCCGGCGACGGCGGCGCGGCTTGATGGCCCCACGCGTCATGGAC
CTCGTCGGACCCGTAGTCAAGGCCGGCACGCTGACCGGAGTTACCGGTGCTATTACAGGCGTCGGCATCGCCATC
GCCTTTGACAAGCGGCCCGTCGGCAGCGGCTTCGTCATGGGTTGCGAATGGTTCGCCCTGGGGTCTACATACTGG
CTATTCAGATCGTTGGCCATTGCGTCAATGGGGGGTGAAGATCAAGTCACGAACAAGGAAAAGGTCATGGCCAGC
GGGCTGGCTGGTTCTGCTGGGGGCGCCGTCGCCGGCCTGATGCGCGGTCCACGAGCCATTGTTCCCTGTGTCGTC
TTTTACGGTCTGCTGACCAGCGGCGGCCAGACGATGATCAACCTCGTGGCGAGCCGTCCACCTCAACCACTAAAG
GAGAAGCGCAGCTGGCTCGAGTCCAAGTGGCTACCCTTCCGTAAGGTGACGGACGAAGAGTACATGGAGAGGCTC
GGCGAGAAGATCCTGCGGGTCGAGGCAGACATTGCCATCTGCGACGAGAGAATTGCGCGGCTCAAGGGGGCAGCA
GCACGAGGCGGAGAGAAGTGA
Gene >Ophcf2|05983
ATGGGCTCGGCCGAATCCCCGGATGAGGCGCCCCGGCGACGGCGGCGCGGCTTGATGGCCCCACGCGTCATGGAC
CTCGTCGGACCCGTAGTCAAGGCCGGCACGCTGACCGGTAGGTATACGCCTACTCTCCCGAGCCGAGCCTCCTGA
CGTTCTTTCAGGAGTTACCGGTGCTATTACAGGCGTCGGCATCGCCATCGCCTTTGACAAGCGGCCCGTCGGCAG
CGGCTTCGTCATGGGTTGCGAATGGTTCGCCCTGGGGTCTACATACTGGCGTGCGTCGCGTCTTCTTTCCAACTC
TACGATTTGGCTTACCGGAGTCTGCGGCAGTATTCAGATCGTTGGCCATTGCGTCAATGGGGGGTGAAGATCAAG
TCACGAACAAGGAAAAGGTCATGGCCAGCGGGCTGGCTGGTTCTGCTGGGGGCGCCGTCGCCGGCCTGATGCGTA
GGTCCCTCCATCTTCCGGCACCAGCATTTCCAACCGTGTCTGACGTCTTCTAGGCGGTCCACGAGCCATTGTTCC
CTGTGTCGTCTTTTACGGTCTGCTGACCAGCGGCGGCCAGACGATGATCAACCTCGTGGCGAGCCGTCCACCTCA
ACCACTAAAGGAGAAGCGCAGCTGGCTCGAGTCCAAGTGGCTACCCTTCCGTAAGGTGACGGACGAAGAGTACAT
GGAGAGGCTCGGCGAGAAGATCCTGCGGGTCGAGGCAGACATTGCCATCTGCGACGAGAGAATTGCGCGGCTCAA
GGGGGCAGCAGCACGAGGCGGAGAGAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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