Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05937
Gene name
Locationscaffold_07:177067..177993
Strand+
Gene length (bp)926
Transcript length (bp)876
Coding sequence length (bp)876
Protein length (aa) 292

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07264 EI24 Etoposide-induced protein 2.4 (EI24) 6.3E-09 31 245

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.5

Transmembrane Domains

Domain # Start End Length
1 48 70 22
2 85 107 22
3 170 192 22
4 237 259 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05937
MDGTIPVSIETPAFVSRPASYLRRAAVAASYPLRGIWYCARDRDFWPLFAGRLLPLSLISLAVYFVLFTFAFLPQ
YALIAIMHGWGAWFNAVVLTLGEGLVITQALFEGFFVDECRVDVFDAVFIKHGLVDLVAQHRLLFNDAPSAVKML
GKPTSPAAYQPWSVIQIIELVVFLPLNLVPLVGTPAFIIITGTRLGKLSQYRWFQLRGLSRREREREIGGLTWDY
VCFGTVAMLLELVPLLSFFFLLTTSAGSAAWAAAMEHHRRQAARAAVEARAGPRGSPPPAYTDDVA*
Coding >Ophcf2|05937
ATGGACGGAACGATACCCGTAAGTATCGAAACTCCCGCCTTTGTCTCGCGACCGGCCTCGTACCTGCGCCGCGCC
GCCGTCGCCGCCTCATACCCTTTACGAGGCATCTGGTATTGCGCGCGCGATCGTGACTTTTGGCCTCTTTTTGCG
GGCAGGCTTTTGCCCTTGTCGCTCATCTCGCTGGCCGTCTATTTCGTGCTCTTTACCTTTGCATTCTTGCCGCAG
TACGCCCTCATCGCCATAATGCATGGATGGGGCGCCTGGTTCAACGCTGTGGTCTTGACGCTGGGCGAGGGACTG
GTTATCACGCAGGCGCTGTTTGAGGGTTTCTTTGTCGACGAGTGTCGCGTCGACGTCTTTGATGCCGTCTTCATC
AAGCATGGCCTCGTCGACCTCGTTGCACAGCACCGACTTCTTTTCAACGATGCCCCCAGCGCCGTCAAGATGCTG
GGAAAGCCTACCAGTCCAGCCGCCTACCAGCCATGGAGCGTGATCCAAATCATCGAGCTCGTCGTCTTCCTCCCG
CTCAACCTGGTGCCCCTCGTCGGCACGCCCGCCTTCATCATCATCACCGGCACGCGCCTAGGGAAGCTCTCTCAA
TACCGCTGGTTCCAGCTGCGCGGTCTGTCTCGGCGAGAGCGCGAGCGCGAGATCGGAGGCCTGACGTGGGACTAC
GTTTGCTTTGGCACCGTCGCCATGCTACTGGAGCTCGTTCCGCTGCTGTCGTTTTTCTTTCTGCTCACTACCTCG
GCCGGGTCGGCTGCCTGGGCTGCTGCTATGGAGCATCATCGGAGGCAGGCTGCTCGGGCCGCTGTGGAAGCTCGG
GCCGGGCCGAGAGGGTCTCCGCCGCCGGCCTACACGGACGACGTGGCGTGA
Transcript >Ophcf2|05937
ATGGACGGAACGATACCCGTAAGTATCGAAACTCCCGCCTTTGTCTCGCGACCGGCCTCGTACCTGCGCCGCGCC
GCCGTCGCCGCCTCATACCCTTTACGAGGCATCTGGTATTGCGCGCGCGATCGTGACTTTTGGCCTCTTTTTGCG
GGCAGGCTTTTGCCCTTGTCGCTCATCTCGCTGGCCGTCTATTTCGTGCTCTTTACCTTTGCATTCTTGCCGCAG
TACGCCCTCATCGCCATAATGCATGGATGGGGCGCCTGGTTCAACGCTGTGGTCTTGACGCTGGGCGAGGGACTG
GTTATCACGCAGGCGCTGTTTGAGGGTTTCTTTGTCGACGAGTGTCGCGTCGACGTCTTTGATGCCGTCTTCATC
AAGCATGGCCTCGTCGACCTCGTTGCACAGCACCGACTTCTTTTCAACGATGCCCCCAGCGCCGTCAAGATGCTG
GGAAAGCCTACCAGTCCAGCCGCCTACCAGCCATGGAGCGTGATCCAAATCATCGAGCTCGTCGTCTTCCTCCCG
CTCAACCTGGTGCCCCTCGTCGGCACGCCCGCCTTCATCATCATCACCGGCACGCGCCTAGGGAAGCTCTCTCAA
TACCGCTGGTTCCAGCTGCGCGGTCTGTCTCGGCGAGAGCGCGAGCGCGAGATCGGAGGCCTGACGTGGGACTAC
GTTTGCTTTGGCACCGTCGCCATGCTACTGGAGCTCGTTCCGCTGCTGTCGTTTTTCTTTCTGCTCACTACCTCG
GCCGGGTCGGCTGCCTGGGCTGCTGCTATGGAGCATCATCGGAGGCAGGCTGCTCGGGCCGCTGTGGAAGCTCGG
GCCGGGCCGAGAGGGTCTCCGCCGCCGGCCTACACGGACGACGTGGCGTGA
Gene >Ophcf2|05937
ATGGACGGAACGATACCCGTAAGTATCGAAACTCCCGCCTTTGTCTCGCGACCGGCCTCGTACCTGCGCCGCGCC
GCCGTCGCCGCCTCATACCCTTTACGAGGCATCTGGTATTGCGCGCGCGATCGTGACTTTTGGCCTCTTTTTGCG
GGCAGGCTTTTGCCCTTGTCGCTCATCTCGCTGGCCGTCTATTTCGTGCTCTTTACCTTTGCATTCTTGCCGCAG
TACGCCCTCATCGCCATAATGCATGGATGGGGCGCCTGGTTCAACGCTGTGGTCTTGACGCTGGGCGAGGGACTG
GTTATCACGCAGGCGCTGTTTGAGGGTTTCTTTGTCGACGAGTGTCGCGTCGACGTCTTTGATGTGAGCTTCAGC
ATATCTTAGACACGTTGGCAGCCGCTGACAGTCCTTAGGCCGTCTTCATCAAGCATGGCCTCGTCGACCTCGTTG
CACAGCACCGACTTCTTTTCAACGATGCCCCCAGCGCCGTCAAGATGCTGGGAAAGCCTACCAGTCCAGCCGCCT
ACCAGCCATGGAGCGTGATCCAAATCATCGAGCTCGTCGTCTTCCTCCCGCTCAACCTGGTGCCCCTCGTCGGCA
CGCCCGCCTTCATCATCATCACCGGCACGCGCCTAGGGAAGCTCTCTCAATACCGCTGGTTCCAGCTGCGCGGTC
TGTCTCGGCGAGAGCGCGAGCGCGAGATCGGAGGCCTGACGTGGGACTACGTTTGCTTTGGCACCGTCGCCATGC
TACTGGAGCTCGTTCCGCTGCTGTCGTTTTTCTTTCTGCTCACTACCTCGGCCGGGTCGGCTGCCTGGGCTGCTG
CTATGGAGCATCATCGGAGGCAGGCTGCTCGGGCCGCTGTGGAAGCTCGGGCCGGGCCGAGAGGGTCTCCGCCGC
CGGCCTACACGGACGACGTGGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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