Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05917
Gene name
Locationscaffold_07:125982..127381
Strand+
Gene length (bp)1399
Transcript length (bp)1212
Coding sequence length (bp)1212
Protein length (aa) 404

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 2.0E-11 1 61

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 154 176 22
2 183 205 22
3 229 251 22
4 264 286 22
5 306 328 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05917
MPACASKCLGPAIAQSSCQVGDQKCLCTDKVLIKNATACIMANCSIKEALHAKNSTATTCGEPVRDKSAGYVAVG
EAFGIASSLCVAQRFAYKLWAKLDIGPDDWTTLAAMALSLPTIALDARIVAPNGMGRDTWTLTHDNINTFSRVFY
VMEILYFADIALIKAALLFFYVRIFPAREVRRLLYGTLAVVSVFGLSFVAIAIFQCSPIDYYWWRWDGEHTGRCI
DMNAMAWSNAAISIALDVWMLAIPLWQLRSLKLDWKKKAGVAMMFCVGTFVTVVSILRLRALDFSSHSTNPTWDF
FDVGIWSTVEINVGIMCVCMPSLRLLLMRLIPWLSTTNSRNRTYAQSGLYPKSRPKVGPNQILQSTTYAVEYGDK
EDGDDMRVVYLRDVDVGSLSTTTEENVI*
Coding >Ophcf2|05917
ATGCCTGCTTGCGCGAGTAAATGCCTGGGGCCTGCTATTGCGCAGTCGAGTTGTCAGGTCGGGGATCAAAAGTGT
CTCTGCACGGACAAGGTGCTCATCAAGAATGCGACGGCGTGCATCATGGCCAATTGTTCCATCAAGGAAGCTCTT
CACGCCAAAAACTCGACAGCAACCACCTGTGGCGAGCCCGTCAGAGACAAGTCGGCGGGATACGTAGCGGTAGGC
GAGGCCTTCGGCATAGCCTCCAGCCTCTGCGTCGCCCAACGCTTCGCCTACAAGCTCTGGGCCAAGCTAGACATC
GGCCCCGACGACTGGACGACGCTGGCAGCCATGGCGCTCAGTCTTCCCACCATTGCCCTCGACGCTCGCATAGTG
GCTCCCAACGGTATGGGACGCGATACCTGGACCTTGACGCACGACAACATCAACACCTTTAGCCGCGTCTTTTAC
GTCATGGAGATTCTGTACTTTGCCGACATTGCTCTCATCAAGGCTGCGCTTCTGTTCTTTTACGTTCGCATCTTT
CCGGCCAGGGAGGTTCGAAGGCTGCTGTACGGAACCTTGGCTGTCGTTTCCGTCTTTGGGCTCAGTTTCGTCGCC
ATTGCCATCTTTCAGTGCAGTCCCATCGACTACTACTGGTGGCGATGGGACGGGGAGCACACTGGAAGGTGCATC
GATATGAACGCCATGGCCTGGTCCAACGCGGCCATCAGCATCGCGCTCGACGTCTGGATGCTGGCGATTCCGCTG
TGGCAGCTGAGGAGCTTGAAGCTGGATTGGAAGAAGAAGGCGGGCGTGGCCATGATGTTCTGCGTCGGAACCTTT
GTCACCGTCGTCAGCATCCTCCGTCTCCGAGCCCTCGACTTCAGCTCGCACTCGACCAACCCGACCTGGGATTTC
TTCGACGTGGGCATCTGGTCGACGGTCGAGATCAACGTGGGCATCATGTGCGTGTGTATGCCATCGCTTCGGCTG
CTGCTGATGCGGCTGATTCCTTGGCTGTCGACGACGAATTCGAGGAACAGGACGTACGCGCAGTCGGGGTTGTAT
CCCAAGTCGCGGCCCAAGGTAGGGCCCAATCAGATATTGCAGTCGACGACGTATGCGGTTGAGTATGGAGATAAG
GAGGATGGGGATGATATGCGGGTTGTGTATCTTCGGGATGTTGATGTTGGGAGTCTTTCCACGACGACGGAGGAG
AATGTGATTTAA
Transcript >Ophcf2|05917
ATGCCTGCTTGCGCGAGTAAATGCCTGGGGCCTGCTATTGCGCAGTCGAGTTGTCAGGTCGGGGATCAAAAGTGT
CTCTGCACGGACAAGGTGCTCATCAAGAATGCGACGGCGTGCATCATGGCCAATTGTTCCATCAAGGAAGCTCTT
CACGCCAAAAACTCGACAGCAACCACCTGTGGCGAGCCCGTCAGAGACAAGTCGGCGGGATACGTAGCGGTAGGC
GAGGCCTTCGGCATAGCCTCCAGCCTCTGCGTCGCCCAACGCTTCGCCTACAAGCTCTGGGCCAAGCTAGACATC
GGCCCCGACGACTGGACGACGCTGGCAGCCATGGCGCTCAGTCTTCCCACCATTGCCCTCGACGCTCGCATAGTG
GCTCCCAACGGTATGGGACGCGATACCTGGACCTTGACGCACGACAACATCAACACCTTTAGCCGCGTCTTTTAC
GTCATGGAGATTCTGTACTTTGCCGACATTGCTCTCATCAAGGCTGCGCTTCTGTTCTTTTACGTTCGCATCTTT
CCGGCCAGGGAGGTTCGAAGGCTGCTGTACGGAACCTTGGCTGTCGTTTCCGTCTTTGGGCTCAGTTTCGTCGCC
ATTGCCATCTTTCAGTGCAGTCCCATCGACTACTACTGGTGGCGATGGGACGGGGAGCACACTGGAAGGTGCATC
GATATGAACGCCATGGCCTGGTCCAACGCGGCCATCAGCATCGCGCTCGACGTCTGGATGCTGGCGATTCCGCTG
TGGCAGCTGAGGAGCTTGAAGCTGGATTGGAAGAAGAAGGCGGGCGTGGCCATGATGTTCTGCGTCGGAACCTTT
GTCACCGTCGTCAGCATCCTCCGTCTCCGAGCCCTCGACTTCAGCTCGCACTCGACCAACCCGACCTGGGATTTC
TTCGACGTGGGCATCTGGTCGACGGTCGAGATCAACGTGGGCATCATGTGCGTGTGTATGCCATCGCTTCGGCTG
CTGCTGATGCGGCTGATTCCTTGGCTGTCGACGACGAATTCGAGGAACAGGACGTACGCGCAGTCGGGGTTGTAT
CCCAAGTCGCGGCCCAAGGTAGGGCCCAATCAGATATTGCAGTCGACGACGTATGCGGTTGAGTATGGAGATAAG
GAGGATGGGGATGATATGCGGGTTGTGTATCTTCGGGATGTTGATGTTGGGAGTCTTTCCACGACGACGGAGGAG
AATGTGATTTAA
Gene >Ophcf2|05917
ATGCCTGCTTGCGCGGTGAGTTCGGATGGTGCTTTTCTTAAGGGGGGGGGGGGGGGTTTGCGTTTGCTGACGGTT
TGGTTGGGTCAAAGAGTAAATGCCTGGGGCCTGCTATTGCGCAGTCGAGTTGTCAGGTCGGGGATCAAAAGTGTC
TCTGCACGGACAAGGTGCTCATCAAGAATGCGACGGCGTGCATCATGGCCAATTGTTCCATCAAGGAAGCTCTTC
GTGAGTACCACAGAGAGGGAGAGGAGAAGAGAGAGGGGGAGAGGAAGAGAGAGACAGAGAGAGAGAGACAGAGAG
ACAAAGACTCAGAAAGAATGAAAACTGACGACAAGCAGACGCCAAAAACTCGACAGCAACCACCTGTGGCGAGCC
CGTCAGAGACAAGTCGGCGGGATACGTAGCGGTAGGCGAGGCCTTCGGCATAGCCTCCAGCCTCTGCGTCGCCCA
ACGCTTCGCCTACAAGCTCTGGGCCAAGCTAGACATCGGCCCCGACGACTGGACGACGCTGGCAGCCATGGCGCT
CAGTCTTCCCACCATTGCCCTCGACGCTCGCATAGTGGCTCCCAACGGTATGGGACGCGATACCTGGACCTTGAC
GCACGACAACATCAACACCTTTAGCCGCGTCTTTTACGTCATGGAGATTCTGTACTTTGCCGACATTGCTCTCAT
CAAGGCTGCGCTTCTGTTCTTTTACGTTCGCATCTTTCCGGCCAGGGAGGTTCGAAGGCTGCTGTACGGAACCTT
GGCTGTCGTTTCCGTCTTTGGGCTCAGTTTCGTCGCCATTGCCATCTTTCAGTGCAGTCCCATCGACTACTACTG
GTGGCGATGGGACGGGGAGCACACTGGAAGGTGCATCGATATGAACGCCATGGCCTGGTCCAACGCGGCCATCAG
CATCGCGCTCGACGTCTGGATGCTGGCGATTCCGCTGTGGCAGCTGAGGAGCTTGAAGCTGGATTGGAAGAAGAA
GGCGGGCGTGGCCATGATGTTCTGCGTCGGAACCTTTGTCACCGTCGTCAGCATCCTCCGTCTCCGAGCCCTCGA
CTTCAGCTCGCACTCGACCAACCCGACCTGGGATTTCTTCGACGTGGGCATCTGGTCGACGGTCGAGATCAACGT
GGGCATCATGTGCGTGTGTATGCCATCGCTTCGGCTGCTGCTGATGCGGCTGATTCCTTGGCTGTCGACGACGAA
TTCGAGGAACAGGACGTACGCGCAGTCGGGGTTGTATCCCAAGTCGCGGCCCAAGGTAGGGCCCAATCAGATATT
GCAGTCGACGACGTATGCGGTTGAGTATGGAGATAAGGAGGATGGGGATGATATGCGGGTTGTGTATCTTCGGGA
TGTTGATGTTGGGAGTCTTTCCACGACGACGGAGGAGAATGTGATTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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